RNA–Protein interactions for RNA: ENST00000549249.5

DEPDC4-207, Transcript of DEP domain containing 4, humanhuman

TSL 1 (best)

Gene DEPDC4, Length 1,003 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC4-207ENST00000549249 RTF1Q92541 710 aaKnown RBP10.52□□□□□ -0.73
DEPDC4-207ENST00000549249 CFAP44Q96MT7 982 aa10.52□□□□□ -0.73
DEPDC4-207ENST00000549249 LGR6Q9HBX8 967 aa10.52□□□□□ -0.73
DEPDC4-207ENST00000549249 MBIPQ9NS73 344 aa10.52□□□□□ -0.73
DEPDC4-207ENST00000549249 USP35Q9P2H5 1018 aa10.52□□□□□ -0.73
DEPDC4-207ENST00000549249 LAS1LQ9Y4W2 734 aaKnown RBP10.52□□□□□ -0.73
DEPDC4-207ENST00000549249 SPATA31A1Q5TZJ5 1347 aa10.52□□□□□ -0.73
DEPDC4-207ENST00000549249 CHL1O00533 1208 aa10.51□□□□□ -0.73
DEPDC4-207ENST00000549249 GNAI1P63096 354 aa10.51□□□□□ -0.73
DEPDC4-207ENST00000549249 EXOSC9Q06265 439 aaKnown RBP10.51□□□□□ -0.73
DEPDC4-207ENST00000549249 MKRN3Q13064 507 aaKnown RBP10.51□□□□□ -0.73
DEPDC4-207ENST00000549249 C1orf141Q5JVX7 400 aa10.51□□□□□ -0.73
DEPDC4-207ENST00000549249 UNC5CLQ8IV45 518 aa10.51□□□□□ -0.73
DEPDC4-207ENST00000549249 SPG7Q9UQ90 795 aa10.51□□□□□ -0.73
DEPDC4-207ENST00000549249 SPATA31A5Q5VU36 1347 aa10.51□□□□□ -0.73
DEPDC4-207ENST00000549249 SPATA31A7Q8IWB4 1347 aa10.51□□□□□ -0.73
DEPDC4-207ENST00000549249 ITGB4P16144 1822 aa10.5□□□□□ -0.73
DEPDC4-207ENST00000549249 MPRIPQ6WCQ1 1025 aa10.5□□□□□ -0.73
DEPDC4-207ENST00000549249 ZCRB1Q8TBF4 217 aaKnown RBP10.5□□□□□ -0.73
DEPDC4-207ENST00000549249 GLI3P10071 1580 aa10.5□□□□□ -0.73
DEPDC4-207ENST00000549249 TNS2Q63HR2 1409 aa10.5□□□□□ -0.73
DEPDC4-207ENST00000549249 PAPPAQ13219 1627 aa10.49□□□□□ -0.73
DEPDC4-207ENST00000549249 IFNL2Q8IZJ0 200 aa10.49□□□□□ -0.73
DEPDC4-207ENST00000549249 MIS18AQ9NYP9 233 aa10.49□□□□□ -0.73
DEPDC4-207ENST00000549249 TAOK2Q9UL54 1235 aa10.49□□□□□ -0.73
DEPDC4-207ENST00000549249 GTF3C3Q9Y5Q9 886 aa10.49□□□□□ -0.73
DEPDC4-207ENST00000549249 THSD7AQ9UPZ6 1657 aa10.49□□□□□ -0.73
DEPDC4-207ENST00000549249 PCDH11XQ9BZA7 1347 aa10.49□□□□□ -0.73
DEPDC4-207ENST00000549249 PCDH11YQ9BZA8 1340 aa10.49□□□□□ -0.73
DEPDC4-207ENST00000549249 VPS72Q15906 364 aa10.48□□□□□ -0.73
DEPDC4-207ENST00000549249 KRT24Q2M2I5 525 aa10.48□□□□□ -0.73
DEPDC4-207ENST00000549249 CCDC125Q86Z20 511 aa10.48□□□□□ -0.73
DEPDC4-207ENST00000549249 TSPYL6Q8N831 410 aa10.48□□□□□ -0.73
DEPDC4-207ENST00000549249 PDCD7Q8N8D1 485 aaKnown RBP10.48□□□□□ -0.73
DEPDC4-207ENST00000549249 THRAP3Q9Y2W1 955 aaKnown RBP10.48□□□□□ -0.73
DEPDC4-207ENST00000549249 DOT1LQ8TEK3 1739 aa10.47□□□□□ -0.73
DEPDC4-207ENST00000549249 BCAR3O75815 825 aa10.47□□□□□ -0.73
DEPDC4-207ENST00000549249 RARSP54136 660 aaKnown RBP10.47□□□□□ -0.73
DEPDC4-207ENST00000549249 RRP1P56182 461 aaKnown RBP10.47□□□□□ -0.73
DEPDC4-207ENST00000549249 TAF7Q15545 349 aaPredicted RBP10.47□□□□□ -0.73
DEPDC4-207ENST00000549249 C8orf58Q8NAV2 365 aa10.47□□□□□ -0.73
DEPDC4-207ENST00000549249 L3MBTL3Q96JM7 780 aaPredicted RBP10.47□□□□□ -0.73
DEPDC4-207ENST00000549249 TSPYL4Q9UJ04 414 aa10.47□□□□□ -0.73
DEPDC4-207ENST00000549249 ATRNO75882 1429 aa10.47□□□□□ -0.73
DEPDC4-207ENST00000549249 C5P01031 1676 aa10.47□□□□□ -0.73
DEPDC4-207ENST00000549249 UBR2Q8IWV8 1755 aa10.47□□□□□ -0.73
DEPDC4-207ENST00000549249 KAT6BQ8WYB5 2073 aa10.46□□□□□ -0.73
DEPDC4-207ENST00000549249 VAMP4O75379 141 aa10.46□□□□□ -0.73
DEPDC4-207ENST00000549249 CT47B1P0C2W7 299 aaPredicted RBP10.46□□□□□ -0.73
DEPDC4-207ENST00000549249 NKX1-1Q15270 411 aaPredicted RBP10.46□□□□□ -0.73
DEPDC4-207ENST00000549249 BARGINQ6ZT62 677 aa10.46□□□□□ -0.73
DEPDC4-207ENST00000549249 C3orf67Q6ZVT6 689 aa10.46□□□□□ -0.73
DEPDC4-207ENST00000549249 DCAF5Q96JK2 942 aa10.46□□□□□ -0.73
DEPDC4-207ENST00000549249 GJD4Q96KN9 370 aaPredicted RBP10.46□□□□□ -0.73
DEPDC4-207ENST00000549249 BABAM1Q9NWV8 329 aa10.46□□□□□ -0.73
DEPDC4-207ENST00000549249 RGS12O14924 1447 aa10.46□□□□□ -0.74
DEPDC4-207ENST00000549249 CACNA1FO60840 1977 aa10.46□□□□□ -0.74
DEPDC4-207ENST00000549249 STK25O00506 426 aa10.45□□□□□ -0.74
DEPDC4-207ENST00000549249 KCNQ3O43525 872 aa10.45□□□□□ -0.74
DEPDC4-207ENST00000549249 PLIN1O60240 522 aa10.45□□□□□ -0.74
DEPDC4-207ENST00000549249 HSP90AB1P08238 724 aaKnown RBP10.45□□□□□ -0.74
DEPDC4-207ENST00000549249 IRX6P78412 446 aaPredicted RBP10.45□□□□□ -0.74
DEPDC4-207ENST00000549249 TEFQ10587 303 aa10.45□□□□□ -0.74
DEPDC4-207ENST00000549249 DDX54Q8TDD1 881 aaKnown RBP10.45□□□□□ -0.74
DEPDC4-207ENST00000549249 BCL2L13Q9BXK5 485 aa10.45□□□□□ -0.74
DEPDC4-207ENST00000549249 BCL11BQ9C0K0 894 aaPredicted RBP10.45□□□□□ -0.74
DEPDC4-207ENST00000549249 SLC52A2Q9HAB3 445 aa10.45□□□□□ -0.74
DEPDC4-207ENST00000549249 CCDC9Q9Y3X0 531 aaKnown RBP10.45□□□□□ -0.74
DEPDC4-207ENST00000549249 ELL2O00472 640 aaPredicted RBP10.44□□□□□ -0.74
DEPDC4-207ENST00000549249 TWISTNBQ3B726 338 aaPredicted RBP10.44□□□□□ -0.74
DEPDC4-207ENST00000549249 SSH1Q8WYL5 1049 aa10.44□□□□□ -0.74
DEPDC4-207ENST00000549249 CDCA7Q9BWT1 371 aaPredicted RBP10.44□□□□□ -0.74
DEPDC4-207ENST00000549249 STK24Q9Y6E0 443 aa10.44□□□□□ -0.74
DEPDC4-207ENST00000549249 BTBD11A6QL63 1104 aa10.43□□□□□ -0.74
DEPDC4-207ENST00000549249 EXOC5O00471 708 aa10.43□□□□□ -0.74
DEPDC4-207ENST00000549249 EIF4A1P60842 406 aaKnown RBP10.43□□□□□ -0.74
DEPDC4-207ENST00000549249 FAM98CQ17RN3 349 aaKnown RBP10.43□□□□□ -0.74
DEPDC4-207ENST00000549249 EFCAB3Q8N7B9 438 aa10.43□□□□□ -0.74
DEPDC4-207ENST00000549249 MARVELD3Q96A59 401 aa10.43□□□□□ -0.74
DEPDC4-207ENST00000549249 LAMB4A4D0S4 1761 aa10.43□□□□□ -0.74
DEPDC4-207ENST00000549249 BRWD3Q6RI45 1802 aa10.42□□□□□ -0.74
DEPDC4-207ENST00000549249 HEG1Q9ULI3 1381 aa10.42□□□□□ -0.74
DEPDC4-207ENST00000549249 C20orf194Q5TEA3 1177 aa10.42□□□□□ -0.74
DEPDC4-207ENST00000549249 NFATC2IPQ8NCF5 419 aa10.42□□□□□ -0.74
DEPDC4-207ENST00000549249 TNNQ9UQP3 1299 aa10.42□□□□□ -0.74
DEPDC4-207ENST00000549249 KCPQ6ZWJ8 1503 aa10.42□□□□□ -0.74
DEPDC4-207ENST00000549249 ERVV-2B6SEH9 535 aa10.41□□□□□ -0.74
DEPDC4-207ENST00000549249 TCERG1O14776 1098 aaKnown RBP10.41□□□□□ -0.74
DEPDC4-207ENST00000549249 NEFLP07196 543 aa10.41□□□□□ -0.74
DEPDC4-207ENST00000549249 CABP4P57796 275 aa10.41□□□□□ -0.74
DEPDC4-207ENST00000549249 SLC39A6Q13433 755 aa10.41□□□□□ -0.74
DEPDC4-207ENST00000549249 SF3B2Q13435 895 aaKnown RBP10.41□□□□□ -0.74
DEPDC4-207ENST00000549249 DDB1Q16531 1140 aa10.41□□□□□ -0.74
DEPDC4-207ENST00000549249 ALDH1L2Q3SY69 923 aa10.41□□□□□ -0.74
DEPDC4-207ENST00000549249 MARCH10Q8NA82 808 aaPredicted RBP10.41□□□□□ -0.74
DEPDC4-207ENST00000549249 ZNF428Q96B54 188 aa10.41□□□□□ -0.74
DEPDC4-207ENST00000549249 SMC4Q9NTJ3 1288 aa10.41□□□□□ -0.74
DEPDC4-207ENST00000549249 SBF2Q86WG5 1849 aa10.41□□□□□ -0.74
DEPDC4-207ENST00000549249 BRPF1P55201 1214 aaPredicted RBP10.4□□□□□ -0.74
DEPDC4-207ENST00000549249 MRPL50Q8N5N7 158 aaKnown RBP10.4□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms