RNA–Protein interactions for RNA: ENST00000549162.5

SCAF11-212, Transcript of SR-related CTD associated factor 11, humanhuman

TSL 1 (best) BASIC

Gene SCAF11, Length 3,934 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-212ENST00000549162 HDAC1Q13547 482 aaPredicted RBP6.46□□□□□ -1.38
SCAF11-212ENST00000549162 NAV1Q8NEY1 1877 aa6.46□□□□□ -1.38
SCAF11-212ENST00000549162 SCN4AP35499 1836 aa6.46□□□□□ -1.38
SCAF11-212ENST00000549162 COL1A1P02452 1464 aaPredicted RBP6.46□□□□□ -1.38
SCAF11-212ENST00000549162 E2F4Q16254 413 aa6.46□□□□□ -1.38
SCAF11-212ENST00000549162 FBXO41Q8TF61 875 aa6.46□□□□□ -1.38
SCAF11-212ENST00000549162 CABP2Q9NPB3 220 aa6.46□□□□□ -1.38
SCAF11-212ENST00000549162 AEBP1Q8IUX7 1158 aa6.45□□□□□ -1.38
SCAF11-212ENST00000549162 CLUAP1Q96AJ1 413 aa6.45□□□□□ -1.38
SCAF11-212ENST00000549162 ZNF512BQ96KM6 892 aaPredicted RBP6.45□□□□□ -1.38
SCAF11-212ENST00000549162 FAM117AQ9C073 453 aa6.45□□□□□ -1.38
SCAF11-212ENST00000549162 CHMP4BQ9H444 224 aaKnown RBP6.45□□□□□ -1.38
SCAF11-212ENST00000549162 POGKQ9P215 609 aa6.45□□□□□ -1.38
SCAF11-212ENST00000549162 ZBTB12Q9Y330 459 aaPredicted RBP6.45□□□□□ -1.38
SCAF11-212ENST00000549162 TOM1O60784 492 aa6.45□□□□□ -1.38
SCAF11-212ENST00000549162 NID2Q14112 1375 aa6.45□□□□□ -1.38
SCAF11-212ENST00000549162 CCDC125Q86Z20 511 aa6.45□□□□□ -1.38
SCAF11-212ENST00000549162 PPIL4Q8WUA2 492 aaKnown RBP eCLIP6.45□□□□□ -1.38
SCAF11-212ENST00000549162 DCAF5Q96JK2 942 aa6.45□□□□□ -1.38
SCAF11-212ENST00000549162 IRS2Q9Y4H2 1338 aa6.45□□□□□ -1.38
SCAF11-212ENST00000549162 FOXD4L5Q5VV16 416 aaPredicted RBP6.44□□□□□ -1.38
SCAF11-212ENST00000549162 FOXD4L4Q8WXT5 416 aaPredicted RBP6.44□□□□□ -1.38
SCAF11-212ENST00000549162 PDZRN3Q9UPQ7 1066 aa6.44□□□□□ -1.38
SCAF11-212ENST00000549162 LRRC37A2A6NM11 1700 aa6.44□□□□□ -1.38
SCAF11-212ENST00000549162 GNAI1P63096 354 aa6.44□□□□□ -1.38
SCAF11-212ENST00000549162 PDE4DQ08499 809 aa6.44□□□□□ -1.38
SCAF11-212ENST00000549162 NEUROD1Q13562 356 aa6.44□□□□□ -1.38
SCAF11-212ENST00000549162 ITGAEP38570 1179 aa6.44□□□□□ -1.38
SCAF11-212ENST00000549162 PROSER2Q86WR7 435 aaPredicted RBP6.44□□□□□ -1.38
SCAF11-212ENST00000549162 PPARGC1BQ86YN6 1023 aaKnown RBP6.44□□□□□ -1.38
SCAF11-212ENST00000549162 TRAIPQ9BWF2 469 aa6.44□□□□□ -1.38
SCAF11-212ENST00000549162 TEX13AQ9BXU3 409 aaPredicted RBP6.44□□□□□ -1.38
SCAF11-212ENST00000549162 OSBPL3Q9H4L5 887 aa6.44□□□□□ -1.38
SCAF11-212ENST00000549162 ERVV-1B6SEH8 477 aa6.43□□□□□ -1.38
SCAF11-212ENST00000549162 PHKG2P15735 406 aa6.43□□□□□ -1.38
SCAF11-212ENST00000549162 ATF3P18847 181 aa6.43□□□□□ -1.38
SCAF11-212ENST00000549162 EIF5BO60841 1220 aaKnown RBP6.43□□□□□ -1.38
SCAF11-212ENST00000549162 VPS33BQ9H267 617 aa6.43□□□□□ -1.38
SCAF11-212ENST00000549162 MYH16Q9H6N6 1097 aa6.43□□□□□ -1.38
SCAF11-212ENST00000549162 TRIM66O15016 1216 aa6.43□□□□□ -1.38
SCAF11-212ENST00000549162 MYT1Q01538 1121 aa6.43□□□□□ -1.38
SCAF11-212ENST00000549162 EYA1Q99502 592 aa6.43□□□□□ -1.38
SCAF11-212ENST00000549162 PLSCR1O15162 318 aa6.42□□□□□ -1.38
SCAF11-212ENST00000549162 RABL6Q3YEC7 729 aaPredicted RBP6.42□□□□□ -1.38
SCAF11-212ENST00000549162 MORC1Q86VD1 984 aa6.42□□□□□ -1.38
SCAF11-212ENST00000549162 SSC5DA1L4H1 1573 aa6.42□□□□□ -1.38
SCAF11-212ENST00000549162 ZMYM6O95789 1325 aa6.42□□□□□ -1.38
SCAF11-212ENST00000549162 TRAK2O60296 914 aa6.42□□□□□ -1.38
SCAF11-212ENST00000549162 ABCB7O75027 752 aa6.42□□□□□ -1.38
SCAF11-212ENST00000549162 GPR108Q9NPR9 543 aa6.42□□□□□ -1.38
SCAF11-212ENST00000549162 MINK1Q8N4C8 1332 aaPredicted RBP6.42□□□□□ -1.38
SCAF11-212ENST00000549162 MTHFSP49914 203 aa6.42□□□□□ -1.38
SCAF11-212ENST00000549162 NME9Q86XW9 330 aa6.42□□□□□ -1.38
SCAF11-212ENST00000549162 SPDYE2BA6NHP3 402 aa6.41□□□□□ -1.38
SCAF11-212ENST00000549162 SPDYE6P0CI01 402 aa6.41□□□□□ -1.38
SCAF11-212ENST00000549162 RBM25P49756 843 aaKnown RBP6.41□□□□□ -1.38
SCAF11-212ENST00000549162 CASP7P55210 303 aa6.41□□□□□ -1.38
SCAF11-212ENST00000549162 FLIIQ13045 1269 aa6.41□□□□□ -1.38
SCAF11-212ENST00000549162 SPDYE2Q495Y8 402 aa6.41□□□□□ -1.38
SCAF11-212ENST00000549162 MAF1Q9H063 256 aa6.41□□□□□ -1.38
SCAF11-212ENST00000549162 GRIPAP1Q4V328 841 aa6.41□□□□□ -1.38
SCAF11-212ENST00000549162 SLC27A3Q5K4L6 730 aa6.41□□□□□ -1.38
SCAF11-212ENST00000549162 UNC5CLQ8IV45 518 aa6.41□□□□□ -1.38
SCAF11-212ENST00000549162 TEX2Q8IWB9 1127 aa6.41□□□□□ -1.38
SCAF11-212ENST00000549162 MRPL50Q8N5N7 158 aaKnown RBP6.41□□□□□ -1.38
SCAF11-212ENST00000549162 RBM26Q5T8P6 1007 aaKnown RBP6.41□□□□□ -1.38
SCAF11-212ENST00000549162 KRI1Q8N9T8 703 aaKnown RBP6.41□□□□□ -1.38
SCAF11-212ENST00000549162 NOP58Q9Y2X3 529 aaKnown RBP6.41□□□□□ -1.38
SCAF11-212ENST00000549162 RNMTO43148 476 aaKnown RBP6.4□□□□□ -1.38
SCAF11-212ENST00000549162 ALDH1L1O75891 902 aa6.4□□□□□ -1.38
SCAF11-212ENST00000549162 SLC10A5Q5PT55 438 aa6.4□□□□□ -1.38
SCAF11-212ENST00000549162 FANCIQ9NVI1 1328 aa6.4□□□□□ -1.38
SCAF11-212ENST00000549162 ATAD5Q96QE3 1844 aa6.4□□□□□ -1.38
SCAF11-212ENST00000549162 CAPN15O75808 1086 aa6.4□□□□□ -1.39
SCAF11-212ENST00000549162 PDIA6Q15084 440 aa6.4□□□□□ -1.39
SCAF11-212ENST00000549162 TMCO4Q5TGY1 634 aa6.4□□□□□ -1.39
SCAF11-212ENST00000549162 FBXL16Q8N461 479 aa6.4□□□□□ -1.39
SCAF11-212ENST00000549162 KCNB2Q92953 911 aa6.4□□□□□ -1.39
SCAF11-212ENST00000549162 SLC52A2Q9HAB3 445 aa6.4□□□□□ -1.39
SCAF11-212ENST00000549162 ADAMTS8Q9UP79 889 aa6.4□□□□□ -1.39
SCAF11-212ENST00000549162 MORC2Q9Y6X9 1032 aaPredicted RBP6.4□□□□□ -1.39
SCAF11-212ENST00000549162 VAMP4O75379 141 aa6.39□□□□□ -1.39
SCAF11-212ENST00000549162 MFAP1P55081 439 aaKnown RBP6.39□□□□□ -1.39
SCAF11-212ENST00000549162 ADCY9O60503 1353 aa6.39□□□□□ -1.39
SCAF11-212ENST00000549162 SMYD5Q6GMV2 418 aa6.39□□□□□ -1.39
SCAF11-212ENST00000549162 EIF4A1P60842 406 aaKnown RBP6.39□□□□□ -1.39
SCAF11-212ENST00000549162 GOLGA2Q08379 1002 aa6.39□□□□□ -1.39
SCAF11-212ENST00000549162 CNGB1Q14028 1251 aaPredicted RBP6.39□□□□□ -1.39
SCAF11-212ENST00000549162 MAP4K4O95819 1239 aaPredicted RBP6.38□□□□□ -1.39
SCAF11-212ENST00000549162 FKBP1AP62942 108 aaKnown RBP6.38□□□□□ -1.39
SCAF11-212ENST00000549162 PLEKHO1Q53GL0 409 aaPredicted RBP6.38□□□□□ -1.39
SCAF11-212ENST00000549162 SPG7Q9UQ90 795 aa6.38□□□□□ -1.39
SCAF11-212ENST00000549162 A6NJR5 290 aa6.38□□□□□ -1.39
SCAF11-212ENST00000549162 GNAT3A8MTJ3 354 aa6.38□□□□□ -1.39
SCAF11-212ENST00000549162 CHRM1P11229 460 aaPredicted RBP6.38□□□□□ -1.39
SCAF11-212ENST00000549162 SLC26A8Q96RN1 970 aa6.38□□□□□ -1.39
SCAF11-212ENST00000549162 LOXHD1Q8IVV2 1947 aa6.38□□□□□ -1.39
SCAF11-212ENST00000549162 RARSP54136 660 aaKnown RBP6.38□□□□□ -1.39
SCAF11-212ENST00000549162 GPIHBP1Q8IV16 184 aa6.37□□□□□ -1.39
SCAF11-212ENST00000549162 FAM212AQ96EL1 285 aa6.37□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms