RNA–Protein interactions for RNA: ENST00000549007.1

APAF1-208, Transcript of apoptotic peptidase activating factor 1, humanhuman

TSL 1 (best) BASIC

Gene APAF1, Length 3,492 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APAF1-208ENST00000549007 USP3Q9Y6I4 520 aa5.64□□□□□ -1.51
APAF1-208ENST00000549007 SH3PXD2AQ5TCZ1 1133 aa5.63□□□□□ -1.51
APAF1-208ENST00000549007 VASH1Q7L8A9 365 aaPredicted RBP5.63□□□□□ -1.51
APAF1-208ENST00000549007 PCF11O94913 1555 aaKnown RBP5.63□□□□□ -1.51
APAF1-208ENST00000549007 ESPNB1AK53 854 aa5.63□□□□□ -1.51
APAF1-208ENST00000549007 ERCC3P19447 782 aa5.63□□□□□ -1.51
APAF1-208ENST00000549007 SKOR1P84550 965 aa5.63□□□□□ -1.51
APAF1-208ENST00000549007 LHX8Q68G74 356 aa5.63□□□□□ -1.51
APAF1-208ENST00000549007 PPARGC1BQ86YN6 1023 aaKnown RBP5.63□□□□□ -1.51
APAF1-208ENST00000549007 ZNF592Q92610 1267 aa5.63□□□□□ -1.51
APAF1-208ENST00000549007 EGFL7Q9UHF1 273 aa5.63□□□□□ -1.51
APAF1-208ENST00000549007 ZBTB39O15060 712 aa5.62□□□□□ -1.51
APAF1-208ENST00000549007 OSBPL3Q9H4L5 887 aa5.62□□□□□ -1.51
APAF1-208ENST00000549007 CDK13Q14004 1512 aaKnown RBP5.62□□□□□ -1.51
APAF1-208ENST00000549007 GDF10P55107 478 aa5.62□□□□□ -1.51
APAF1-208ENST00000549007 MCCD1P59942 119 aaPredicted RBP5.62□□□□□ -1.51
APAF1-208ENST00000549007 EAPPQ56P03 285 aaPredicted RBP5.62□□□□□ -1.51
APAF1-208ENST00000549007 ETNK1Q9HBU6 452 aa5.62□□□□□ -1.51
APAF1-208ENST00000549007 NUP153P49790 1475 aaKnown RBP5.62□□□□□ -1.51
APAF1-208ENST00000549007 ABCC2Q92887 1545 aa5.62□□□□□ -1.51
APAF1-208ENST00000549007 ABCA8O94911 1581 aa5.62□□□□□ -1.51
APAF1-208ENST00000549007 MYCP01106 439 aaPredicted RBP5.62□□□□□ -1.51
APAF1-208ENST00000549007 RNF20Q5VTR2 975 aa5.62□□□□□ -1.51
APAF1-208ENST00000549007 HELQQ8TDG4 1101 aa5.62□□□□□ -1.51
APAF1-208ENST00000549007 RAPGEF6Q8TEU7 1601 aa5.62□□□□□ -1.51
APAF1-208ENST00000549007 FMN1Q68DA7 1419 aa5.61□□□□□ -1.51
APAF1-208ENST00000549007 ZNF784Q8NCA9 323 aaPredicted RBP5.61□□□□□ -1.51
APAF1-208ENST00000549007 C1QTNF2Q9BXJ5 285 aa5.61□□□□□ -1.51
APAF1-208ENST00000549007 NGLY1Q96IV0 654 aa5.61□□□□□ -1.51
APAF1-208ENST00000549007 ATAD2Q6PL18 1390 aa5.61□□□□□ -1.51
APAF1-208ENST00000549007 TRIM32Q13049 653 aa5.61□□□□□ -1.51
APAF1-208ENST00000549007 PARP3Q9Y6F1 533 aa5.61□□□□□ -1.51
APAF1-208ENST00000549007 ZSCAN29Q8IWY8 852 aaPredicted RBP5.6□□□□□ -1.51
APAF1-208ENST00000549007 KRTAP3-3Q9BYR6 98 aa5.6□□□□□ -1.51
APAF1-208ENST00000549007 KRTAP3-2Q9BYR7 98 aa5.6□□□□□ -1.51
APAF1-208ENST00000549007 LRFN2Q9ULH4 789 aa5.6□□□□□ -1.51
APAF1-208ENST00000549007 ATP10BO94823 1461 aa5.6□□□□□ -1.51
APAF1-208ENST00000549007 VPS8Q8N3P4 1428 aa5.6□□□□□ -1.51
APAF1-208ENST00000549007 PPP1R12BO60237 982 aaPredicted RBP5.6□□□□□ -1.51
APAF1-208ENST00000549007 EIF1AXP47813 144 aaKnown RBP5.6□□□□□ -1.51
APAF1-208ENST00000549007 RGL4Q8IZJ4 473 aa5.6□□□□□ -1.51
APAF1-208ENST00000549007 ARHGEF10LQ9HCE6 1279 aa5.6□□□□□ -1.51
APAF1-208ENST00000549007 GPR182O15218 404 aa5.6□□□□□ -1.51
APAF1-208ENST00000549007 ZCCHC11Q5TAX3 1644 aaKnown RBP5.59□□□□□ -1.51
APAF1-208ENST00000549007 ESF1Q9H501 851 aaKnown RBP5.59□□□□□ -1.51
APAF1-208ENST00000549007 CASKIN1Q8WXD9 1431 aa5.59□□□□□ -1.51
APAF1-208ENST00000549007 UHRF1BP1LA0JNW5 1464 aa5.59□□□□□ -1.51
APAF1-208ENST00000549007 EPHA4P54764 986 aa5.59□□□□□ -1.51
APAF1-208ENST00000549007 SF3B2Q13435 895 aaKnown RBP5.59□□□□□ -1.51
APAF1-208ENST00000549007 NAALADL2Q58DX5 795 aa5.59□□□□□ -1.51
APAF1-208ENST00000549007 COX20Q5RI15 118 aa5.59□□□□□ -1.51
APAF1-208ENST00000549007 LDLRAD1Q5T700 205 aa5.59□□□□□ -1.51
APAF1-208ENST00000549007 VTI1AQ96AJ9 217 aa5.59□□□□□ -1.51
APAF1-208ENST00000549007 LRRIQ1Q96JM4 1722 aa5.59□□□□□ -1.52
APAF1-208ENST00000549007 EPRSP07814 1512 aaKnown RBP5.59□□□□□ -1.52
APAF1-208ENST00000549007 ERCC5P28715 1186 aaPredicted RBP5.58□□□□□ -1.52
APAF1-208ENST00000549007 SLC9A9Q8IVB4 645 aa5.58□□□□□ -1.52
APAF1-208ENST00000549007 FAM177A1Q8N128 213 aaPredicted RBP5.58□□□□□ -1.52
APAF1-208ENST00000549007 DUSP9Q99956 384 aaKnown RBP5.58□□□□□ -1.52
APAF1-208ENST00000549007 IL21Q9HBE4 155 aa5.58□□□□□ -1.52
APAF1-208ENST00000549007 ASXL2Q76L83 1435 aa5.58□□□□□ -1.52
APAF1-208ENST00000549007 KDM5BQ9UGL1 1544 aa5.58□□□□□ -1.52
APAF1-208ENST00000549007 HECW1Q76N89 1606 aa5.58□□□□□ -1.52
APAF1-208ENST00000549007 A6NHS1 94 aa5.58□□□□□ -1.52
APAF1-208ENST00000549007 ERVK-9P63128 1117 aa5.58□□□□□ -1.52
APAF1-208ENST00000549007 HDLBPQ00341 1268 aaKnown RBP5.58□□□□□ -1.52
APAF1-208ENST00000549007 EHBP1Q8NDI1 1231 aa5.58□□□□□ -1.52
APAF1-208ENST00000549007 RNF223E7ERA6 249 aa5.58□□□□□ -1.52
APAF1-208ENST00000549007 FZD6O60353 706 aa5.58□□□□□ -1.52
APAF1-208ENST00000549007 PTCD1O75127 700 aaKnown RBP5.58□□□□□ -1.52
APAF1-208ENST00000549007 ADD1P35611 737 aaKnown RBP5.58□□□□□ -1.52
APAF1-208ENST00000549007 PCDH10Q9P2E7 1040 aa5.58□□□□□ -1.52
APAF1-208ENST00000549007 FYCO1Q9BQS8 1478 aa5.58□□□□□ -1.52
APAF1-208ENST00000549007 CC2D2BQ6DHV5 1058 aa5.57□□□□□ -1.52
APAF1-208ENST00000549007 C16orf46Q6P387 395 aa5.57□□□□□ -1.52
APAF1-208ENST00000549007 BRPF3Q9ULD4 1205 aa5.57□□□□□ -1.52
APAF1-208ENST00000549007 TNFRSF10BO14763 440 aa5.57□□□□□ -1.52
APAF1-208ENST00000549007 INHAP05111 366 aa5.57□□□□□ -1.52
APAF1-208ENST00000549007 LDHBP07195 334 aaKnown RBP5.57□□□□□ -1.52
APAF1-208ENST00000549007 IGFBP4P22692 258 aa5.57□□□□□ -1.52
APAF1-208ENST00000549007 TRMT44Q8IYL2 757 aaKnown RBP5.57□□□□□ -1.52
APAF1-208ENST00000549007 QTRT2Q9H974 415 aaKnown RBP5.57□□□□□ -1.52
APAF1-208ENST00000549007 PARP2Q9UGN5 583 aa5.57□□□□□ -1.52
APAF1-208ENST00000549007 MAGI3Q5TCQ9 1506 aa5.57□□□□□ -1.52
APAF1-208ENST00000549007 NR3C2P08235 984 aa5.57□□□□□ -1.52
APAF1-208ENST00000549007 GRM5P41594 1212 aa5.57□□□□□ -1.52
APAF1-208ENST00000549007 SEPT12Q8IYM1 358 aa5.57□□□□□ -1.52
APAF1-208ENST00000549007 ZBTB24O43167 697 aaPredicted RBP5.56□□□□□ -1.52
APAF1-208ENST00000549007 TREHO43280 583 aa5.56□□□□□ -1.52
APAF1-208ENST00000549007 NDUFB5O43674 189 aa5.56□□□□□ -1.52
APAF1-208ENST00000549007 SMARCA5O60264 1052 aaPredicted RBP5.56□□□□□ -1.52
APAF1-208ENST00000549007 EHHADHQ08426 723 aa5.56□□□□□ -1.52
APAF1-208ENST00000549007 NIF3L1Q9GZT8 377 aa5.56□□□□□ -1.52
APAF1-208ENST00000549007 KLK14Q9P0G3 267 aa5.56□□□□□ -1.52
APAF1-208ENST00000549007 PLEKHD1A6NEE1 506 aa5.56□□□□□ -1.52
APAF1-208ENST00000549007 TNNI2P48788 182 aa5.56□□□□□ -1.52
APAF1-208ENST00000549007 DNM1Q05193 864 aaKnown RBP5.56□□□□□ -1.52
APAF1-208ENST00000549007 NT5DC4Q86YG4 428 aa5.56□□□□□ -1.52
APAF1-208ENST00000549007 TMEM87AQ8NBN3 555 aa5.56□□□□□ -1.52
APAF1-208ENST00000549007 MRPL58Q14197 206 aaKnown RBP5.55□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 56.9 ms