RNA–Protein interactions for RNA: ENST00000548350.1

ASIC1-204, Transcript of acid sensing ion channel subunit 1, human

TSL 4

Gene ASIC1, Length 560 nt, Biotype retained intron.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ASIC1-204	ENST00000548350	MRC1	P22897	1456 aa		13.99	□□□□□ -0.17
ASIC1-204	ENST00000548350	CEMIP	Q8WUJ3	1361 aa		13.98	□□□□□ -0.17
ASIC1-204	ENST00000548350	ZNF831	Q5JPB2	1677 aa		13.98	□□□□□ -0.17
ASIC1-204	ENST00000548350	ZPR1	O75312	459 aa		13.98	□□□□□ -0.17
ASIC1-204	ENST00000548350	RIPK4	P57078	832 aa		13.98	□□□□□ -0.17
ASIC1-204	ENST00000548350	DCTN1	Q14203	1278 aa		13.98	□□□□□ -0.17
ASIC1-204	ENST00000548350	ARHGEF1	Q92888	912 aa	Known RBP	13.98	□□□□□ -0.17
ASIC1-204	ENST00000548350	KIF3C	O14782	793 aa		13.97	□□□□□ -0.17
ASIC1-204	ENST00000548350	CYP19A1	P11511	503 aa	Predicted RBP	13.97	□□□□□ -0.17
ASIC1-204	ENST00000548350	RUNDC1	Q96C34	613 aa		13.97	□□□□□ -0.17
ASIC1-204	ENST00000548350	ZNF496	Q96IT1	587 aa	Predicted RBP	13.97	□□□□□ -0.17
ASIC1-204	ENST00000548350	UBR3	Q6ZT12	1888 aa		13.97	□□□□□ -0.17
ASIC1-204	ENST00000548350		A0A087WZG4	1122 aa		13.96	□□□□□ -0.17
ASIC1-204	ENST00000548350	ADAMTS7	Q9UKP4	1686 aa		13.95	□□□□□ -0.18
ASIC1-204	ENST00000548350	MMP10	P09238	476 aa		13.95	□□□□□ -0.18
ASIC1-204	ENST00000548350	SNRPA1	P09661	255 aa	Known RBP	13.95	□□□□□ -0.18
ASIC1-204	ENST00000548350	CANX	P27824	592 aa	Known RBP	13.95	□□□□□ -0.18
ASIC1-204	ENST00000548350	NEUROD2	Q15784	382 aa		13.95	□□□□□ -0.18
ASIC1-204	ENST00000548350	INTS5	Q6P9B9	1019 aa	Known RBP	13.95	□□□□□ -0.18
ASIC1-204	ENST00000548350	CCDC146	Q8IYE0	955 aa		13.95	□□□□□ -0.18
ASIC1-204	ENST00000548350	ADAMTS8	Q9UP79	889 aa		13.95	□□□□□ -0.18
ASIC1-204	ENST00000548350	HEG1	Q9ULI3	1381 aa		13.95	□□□□□ -0.18
ASIC1-204	ENST00000548350	TMPO	P42166	694 aa	Known RBP	13.94	□□□□□ -0.18
ASIC1-204	ENST00000548350	ZNF330	Q9Y3S2	320 aa	Predicted RBP	13.94	□□□□□ -0.18
ASIC1-204	ENST00000548350	PARP3	Q9Y6F1	533 aa		13.94	□□□□□ -0.18
ASIC1-204	ENST00000548350	MYH14	Q7Z406	1995 aa	Known RBP	13.93	□□□□□ -0.18
ASIC1-204	ENST00000548350		A0A0G2JLW4	131 aa		13.93	□□□□□ -0.18
ASIC1-204	ENST00000548350	BCS1L	Q9Y276	419 aa		13.93	□□□□□ -0.18
ASIC1-204	ENST00000548350	COL5A3	P25940	1745 aa	Predicted RBP	13.93	□□□□□ -0.18
ASIC1-204	ENST00000548350	KCNQ3	O43525	872 aa		13.92	□□□□□ -0.18
ASIC1-204	ENST00000548350	ARHGAP27	Q6ZUM4	889 aa		13.92	□□□□□ -0.18
ASIC1-204	ENST00000548350	MIS18A	Q9NYP9	233 aa		13.92	□□□□□ -0.18
ASIC1-204	ENST00000548350	KCP	Q6ZWJ8	1503 aa		13.91	□□□□□ -0.18
ASIC1-204	ENST00000548350	GYS1	P13807	737 aa		13.91	□□□□□ -0.18
ASIC1-204	ENST00000548350	APLP1	P51693	650 aa		13.91	□□□□□ -0.18
ASIC1-204	ENST00000548350	MRS2	Q9HD23	443 aa		13.91	□□□□□ -0.18
ASIC1-204	ENST00000548350	TSPYL4	Q9UJ04	414 aa		13.91	□□□□□ -0.18
ASIC1-204	ENST00000548350	ZBTB1	Q9Y2K1	713 aa		13.91	□□□□□ -0.18
ASIC1-204	ENST00000548350	RRP7A	Q9Y3A4	280 aa	Known RBP	13.91	□□□□□ -0.18
ASIC1-204	ENST00000548350	DLG5	Q8TDM6	1919 aa		13.91	□□□□□ -0.18
ASIC1-204	ENST00000548350	SOS1	Q07889	1333 aa	Predicted RBP	13.9	□□□□□ -0.18
ASIC1-204	ENST00000548350	IL6ST	P40189	918 aa	Predicted RBP	13.9	□□□□□ -0.18
ASIC1-204	ENST00000548350	CALD1	Q05682	793 aa	Known RBP	13.9	□□□□□ -0.18
ASIC1-204	ENST00000548350	THUMPD2	Q9BTF0	503 aa	Known RBP	13.9	□□□□□ -0.18
ASIC1-204	ENST00000548350	BABAM1	Q9NWV8	329 aa		13.9	□□□□□ -0.18
ASIC1-204	ENST00000548350	SRP68	Q9UHB9	627 aa	Known RBP	13.9	□□□□□ -0.18
ASIC1-204	ENST00000548350	NARF	Q9UHQ1	456 aa		13.9	□□□□□ -0.18
ASIC1-204	ENST00000548350	SIPA1L3	O60292	1781 aa	Predicted RBP	13.9	□□□□□ -0.18
ASIC1-204	ENST00000548350	TJP1	Q07157	1748 aa		13.9	□□□□□ -0.18
ASIC1-204	ENST00000548350	USP42	Q9H9J4	1324 aa	Known RBP	13.9	□□□□□ -0.19
ASIC1-204	ENST00000548350	PXDNL	A1KZ92	1463 aa		13.89	□□□□□ -0.19
ASIC1-204	ENST00000548350	COL15A1	P39059	1388 aa		13.89	□□□□□ -0.19
ASIC1-204	ENST00000548350	A1BG	P04217	495 aa		13.89	□□□□□ -0.19
ASIC1-204	ENST00000548350	USPL1	Q5W0Q7	1092 aa		13.89	□□□□□ -0.19
ASIC1-204	ENST00000548350	NMRK2	Q9NPI5	230 aa		13.89	□□□□□ -0.19
ASIC1-204	ENST00000548350	LAS1L	Q9Y4W2	734 aa	Known RBP	13.89	□□□□□ -0.19
ASIC1-204	ENST00000548350	UBR2	Q8IWV8	1755 aa		13.88	□□□□□ -0.19
ASIC1-204	ENST00000548350	TOMM70	O94826	608 aa		13.88	□□□□□ -0.19
ASIC1-204	ENST00000548350	DPEP1	P16444	411 aa		13.88	□□□□□ -0.19
ASIC1-204	ENST00000548350	EIF5	P55010	431 aa	Known RBP	13.88	□□□□□ -0.19
ASIC1-204	ENST00000548350	TGFB2	P61812	414 aa		13.88	□□□□□ -0.19
ASIC1-204	ENST00000548350	FKBP8	Q14318	412 aa		13.88	□□□□□ -0.19
ASIC1-204	ENST00000548350	USP16	Q9Y5T5	823 aa		13.88	□□□□□ -0.19
ASIC1-204	ENST00000548350	CIC	Q96RK0	1608 aa	Predicted RBP	13.87	□□□□□ -0.19
ASIC1-204	ENST00000548350	NPHP1	O15259	732 aa		13.87	□□□□□ -0.19
ASIC1-204	ENST00000548350	DNAJC5G	Q8N7S2	189 aa		13.87	□□□□□ -0.19
ASIC1-204	ENST00000548350	APAF1	O14727	1248 aa		13.86	□□□□□ -0.19
ASIC1-204	ENST00000548350	EIF4A1	P60842	406 aa	Known RBP	13.86	□□□□□ -0.19
ASIC1-204	ENST00000548350	TBC1D2B	Q9UPU7	963 aa		13.86	□□□□□ -0.19
ASIC1-204	ENST00000548350	ZNF652	Q9Y2D9	606 aa		13.86	□□□□□ -0.19
ASIC1-204	ENST00000548350	HTRA3	P83110	453 aa		13.85	□□□□□ -0.19
ASIC1-204	ENST00000548350	C9orf131	Q5VYM1	1079 aa		13.85	□□□□□ -0.19
ASIC1-204	ENST00000548350	DZIP3	Q86Y13	1208 aa	Known RBP	13.85	□□□□□ -0.19
ASIC1-204	ENST00000548350	N4BP2	Q86UW6	1770 aa	Predicted RBP	13.84	□□□□□ -0.19
ASIC1-204	ENST00000548350	C10orf71	Q711Q0	1435 aa		13.84	□□□□□ -0.19
ASIC1-204	ENST00000548350	BICDL1	Q6ZP65	573 aa		13.84	□□□□□ -0.19
ASIC1-204	ENST00000548350	C16orf71	Q8IYS4	520 aa	Predicted RBP	13.84	□□□□□ -0.19
ASIC1-204	ENST00000548350	SETDB2	Q96T68	719 aa		13.84	□□□□□ -0.19
ASIC1-204	ENST00000548350	PRAMEF22	A3QJZ6	481 aa		13.83	□□□□□ -0.2
ASIC1-204	ENST00000548350	EIF2S2	P20042	333 aa	Known RBP	13.83	□□□□□ -0.2
ASIC1-204	ENST00000548350	TM4SF1	P30408	202 aa		13.83	□□□□□ -0.2
ASIC1-204	ENST00000548350	NGEF	Q8N5V2	710 aa		13.83	□□□□□ -0.2
ASIC1-204	ENST00000548350	TRIM35	Q9UPQ4	493 aa		13.83	□□□□□ -0.2
ASIC1-204	ENST00000548350	C4A	P0C0L4	1744 aa		13.82	□□□□□ -0.2
ASIC1-204	ENST00000548350	CHL1	O00533	1208 aa		13.82	□□□□□ -0.2
ASIC1-204	ENST00000548350	SERPINB2	P05120	415 aa		13.82	□□□□□ -0.2
ASIC1-204	ENST00000548350	PIP4K2A	P48426	406 aa	Predicted RBP	13.82	□□□□□ -0.2
ASIC1-204	ENST00000548350	GNAI1	P63096	354 aa		13.82	□□□□□ -0.2
ASIC1-204	ENST00000548350	NFIX	Q14938	502 aa		13.82	□□□□□ -0.2
ASIC1-204	ENST00000548350	CLEC4G	Q6UXB4	293 aa		13.82	□□□□□ -0.2
ASIC1-204	ENST00000548350	KIF6	Q6ZMV9	814 aa		13.82	□□□□□ -0.2
ASIC1-204	ENST00000548350	CFAP44	Q96MT7	982 aa		13.82	□□□□□ -0.2
ASIC1-204	ENST00000548350	CHMP4A	Q9BY43	222 aa		13.82	□□□□□ -0.2
ASIC1-204	ENST00000548350	POLRMT	O00411	1230 aa	Known RBP	13.81	□□□□□ -0.2
ASIC1-204	ENST00000548350	MYL6B	P14649	208 aa		13.81	□□□□□ -0.2
ASIC1-204	ENST00000548350	KCNA3	P22001	575 aa		13.81	□□□□□ -0.2
ASIC1-204	ENST00000548350	CCDC184	Q52MB2	194 aa		13.81	□□□□□ -0.2
ASIC1-204	ENST00000548350	RBM46	Q8TBY0	533 aa	Known RBP	13.81	□□□□□ -0.2
ASIC1-204	ENST00000548350	PIM2	Q9P1W9	311 aa		13.81	□□□□□ -0.2
ASIC1-204	ENST00000548350	KIAA1551	Q9HCM1	1747 aa		13.81	□□□□□ -0.2

Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms