RNA–Protein interactions for RNA: ENST00000548225.1

RNF41-205, Transcript of ring finger protein 41, humanhuman

TSL 5

Gene RNF41, Length 1,001 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF41-205ENST00000548225 RIPK4P57078 832 aa20.02■□□□□ 0.8
RNF41-205ENST00000548225 KDM3BQ7LBC6 1761 aa20.02■□□□□ 0.8
RNF41-205ENST00000548225 USP42Q9H9J4 1324 aaKnown RBP20.02■□□□□ 0.79
RNF41-205ENST00000548225 KCNQ3O43525 872 aa20.01■□□□□ 0.79
RNF41-205ENST00000548225 ZBTB1Q9Y2K1 713 aa20.01■□□□□ 0.79
RNF41-205ENST00000548225 COL15A1P39059 1388 aa20■□□□□ 0.79
RNF41-205ENST00000548225 GYS1P13807 737 aa20■□□□□ 0.79
RNF41-205ENST00000548225 CCDC146Q8IYE0 955 aa20■□□□□ 0.79
RNF41-205ENST00000548225 SNRPA1P09661 255 aaKnown RBP19.99■□□□□ 0.79
RNF41-205ENST00000548225 KLHL34Q8N239 644 aa19.99■□□□□ 0.79
RNF41-205ENST00000548225 CD2APQ9Y5K6 639 aa19.99■□□□□ 0.79
RNF41-205ENST00000548225 MMP10P09238 476 aa19.98■□□□□ 0.79
RNF41-205ENST00000548225 THUMPD2Q9BTF0 503 aaKnown RBP19.98■□□□□ 0.79
RNF41-205ENST00000548225 LAMB4A4D0S4 1761 aa19.98■□□□□ 0.79
RNF41-205ENST00000548225 A0A087WZG4 1122 aa19.97■□□□□ 0.79
RNF41-205ENST00000548225 ZPR1O75312 459 aa19.97■□□□□ 0.79
RNF41-205ENST00000548225 CANXP27824 592 aaKnown RBP19.97■□□□□ 0.79
RNF41-205ENST00000548225 BABAM1Q9NWV8 329 aa19.97■□□□□ 0.79
RNF41-205ENST00000548225 IL6STP40189 918 aaPredicted RBP19.96■□□□□ 0.79
RNF41-205ENST00000548225 EIF5P55010 431 aaKnown RBP19.96■□□□□ 0.79
RNF41-205ENST00000548225 SRP68Q9UHB9 627 aaKnown RBP19.96■□□□□ 0.79
RNF41-205ENST00000548225 NARFQ9UHQ1 456 aa19.96■□□□□ 0.79
RNF41-205ENST00000548225 NPM2Q86SE8 214 aaKnown RBP19.94■□□□□ 0.78
RNF41-205ENST00000548225 MIS18AQ9NYP9 233 aa19.94■□□□□ 0.78
RNF41-205ENST00000548225 RRP7AQ9Y3A4 280 aaKnown RBP19.94■□□□□ 0.78
RNF41-205ENST00000548225 USP16Q9Y5T5 823 aa19.94■□□□□ 0.78
RNF41-205ENST00000548225 KIF13BQ9NQT8 1826 aa19.93■□□□□ 0.78
RNF41-205ENST00000548225 EIF4A1P60842 406 aaKnown RBP19.93■□□□□ 0.78
RNF41-205ENST00000548225 FKBP8Q14318 412 aa19.93■□□□□ 0.78
RNF41-205ENST00000548225 NEUROD2Q15784 382 aa19.93■□□□□ 0.78
RNF41-205ENST00000548225 USPL1Q5W0Q7 1092 aa19.93■□□□□ 0.78
RNF41-205ENST00000548225 TSPYL4Q9UJ04 414 aa19.93■□□□□ 0.78
RNF41-205ENST00000548225 PARP3Q9Y6F1 533 aa19.93■□□□□ 0.78
RNF41-205ENST00000548225 SCN7AQ01118 1682 aa19.93■□□□□ 0.78
RNF41-205ENST00000548225 A1BGP04217 495 aa19.92■□□□□ 0.78
RNF41-205ENST00000548225 NLGN2Q8NFZ4 835 aa19.92■□□□□ 0.78
RNF41-205ENST00000548225 MRS2Q9HD23 443 aa19.92■□□□□ 0.78
RNF41-205ENST00000548225 TRIM35Q9UPQ4 493 aa19.92■□□□□ 0.78
RNF41-205ENST00000548225 PRAMEF22A3QJZ6 481 aa19.91■□□□□ 0.78
RNF41-205ENST00000548225 GIGYF1O75420 1035 aaPredicted RBP19.91■□□□□ 0.78
RNF41-205ENST00000548225 CCDC184Q52MB2 194 aa19.91■□□□□ 0.78
RNF41-205ENST00000548225 C10orf71Q711Q0 1435 aa19.91■□□□□ 0.78
RNF41-205ENST00000548225 APAF1O14727 1248 aa19.89■□□□□ 0.77
RNF41-205ENST00000548225 TM4SF1P30408 202 aa19.89■□□□□ 0.77
RNF41-205ENST00000548225 BCORQ6W2J9 1755 aa19.89■□□□□ 0.77
RNF41-205ENST00000548225 ZNF330Q9Y3S2 320 aaPredicted RBP19.89■□□□□ 0.77
RNF41-205ENST00000548225 BCL2L12Q9HB09 334 aa19.88■□□□□ 0.77
RNF41-205ENST00000548225 POLRMTO00411 1230 aaKnown RBP19.87■□□□□ 0.77
RNF41-205ENST00000548225 CHL1O00533 1208 aa19.87■□□□□ 0.77
RNF41-205ENST00000548225 CALD1Q05682 793 aaKnown RBP19.87■□□□□ 0.77
RNF41-205ENST00000548225 DDR1Q08345 913 aa19.87■□□□□ 0.77
RNF41-205ENST00000548225 GPR162Q16538 588 aa19.87■□□□□ 0.77
RNF41-205ENST00000548225 ERBB4Q15303 1308 aa19.86■□□□□ 0.77
RNF41-205ENST00000548225 NRXN2Q9P2S2 1712 aa19.86■□□□□ 0.77
RNF41-205ENST00000548225 RGL2O15211 777 aa19.86■□□□□ 0.77
RNF41-205ENST00000548225 TGFB2P61812 414 aa19.86■□□□□ 0.77
RNF41-205ENST00000548225 NFIXQ14938 502 aa19.86■□□□□ 0.77
RNF41-205ENST00000548225 DZIP3Q86Y13 1208 aaKnown RBP19.86■□□□□ 0.77
RNF41-205ENST00000548225 NBPF26B4DH59 902 aa19.85■□□□□ 0.77
RNF41-205ENST00000548225 NBPF10Q6P3W6 841 aaKnown RBP19.85■□□□□ 0.77
RNF41-205ENST00000548225 NBPF15Q8N660 670 aa19.85■□□□□ 0.77
RNF41-205ENST00000548225 TBC1D2BQ9UPU7 963 aa19.85■□□□□ 0.77
RNF41-205ENST00000548225 KIAA1551Q9HCM1 1747 aa19.85■□□□□ 0.77
RNF41-205ENST00000548225 CAMTA2O94983 1202 aa19.84■□□□□ 0.77
RNF41-205ENST00000548225 CFAP44Q96MT7 982 aa19.84■□□□□ 0.77
RNF41-205ENST00000548225 PXDNLA1KZ92 1463 aa19.84■□□□□ 0.77
RNF41-205ENST00000548225 PIP4K2AP48426 406 aaPredicted RBP19.83■□□□□ 0.77
RNF41-205ENST00000548225 NCBP3Q53F19 620 aaKnown RBP19.83■□□□□ 0.77
RNF41-205ENST00000548225 CLEC4GQ6UXB4 293 aa19.83■□□□□ 0.77
RNF41-205ENST00000548225 ZNF652Q9Y2D9 606 aa19.83■□□□□ 0.77
RNF41-205ENST00000548225 AFDNP55196 1824 aaKnown RBP19.83■□□□□ 0.76
RNF41-205ENST00000548225 GRIN3BO60391 1043 aa19.82■□□□□ 0.76
RNF41-205ENST00000548225 PELP1Q8IZL8 1130 aaKnown RBP19.82■□□□□ 0.76
RNF41-205ENST00000548225 LAS1LQ9Y4W2 734 aaKnown RBP19.82■□□□□ 0.76
RNF41-205ENST00000548225 CARMIL3Q8ND23 1372 aa19.82■□□□□ 0.76
RNF41-205ENST00000548225 CCDC27Q2M243 656 aa19.81■□□□□ 0.76
RNF41-205ENST00000548225 IFT57Q9NWB7 429 aa19.81■□□□□ 0.76
RNF41-205ENST00000548225 CHD4Q14839 1912 aa19.8■□□□□ 0.76
RNF41-205ENST00000548225 N4BP2Q86UW6 1770 aaPredicted RBP19.8■□□□□ 0.76
RNF41-205ENST00000548225 SERPINB2P05120 415 aa19.8■□□□□ 0.76
RNF41-205ENST00000548225 HOXB7P09629 217 aa19.8■□□□□ 0.76
RNF41-205ENST00000548225 ZNF853P0CG23 659 aa19.8■□□□□ 0.76
RNF41-205ENST00000548225 TBC1D9BQ66K14 1250 aa19.8■□□□□ 0.76
RNF41-205ENST00000548225 YBX3P16989 372 aaKnown RBP eCLIP19.79■□□□□ 0.763e-9■■■■■ 29.8
RNF41-205ENST00000548225 GNAI1P63096 354 aa19.79■□□□□ 0.76
RNF41-205ENST00000548225 SETDB2Q96T68 719 aa19.79■□□□□ 0.76
RNF41-205ENST00000548225 BRCA1P38398 1863 aaKnown RBP19.78■□□□□ 0.76
RNF41-205ENST00000548225 BICDL1Q6ZP65 573 aa19.78■□□□□ 0.76
RNF41-205ENST00000548225 ERVV-1B6SEH8 477 aa19.77■□□□□ 0.76
RNF41-205ENST00000548225 YY1P25490 414 aa19.77■□□□□ 0.76
RNF41-205ENST00000548225 MBIPQ9NS73 344 aa19.77■□□□□ 0.76
RNF41-205ENST00000548225 A0A0G2JLW4 131 aa19.76■□□□□ 0.75
RNF41-205ENST00000548225 MYL6BP14649 208 aa19.76■□□□□ 0.75
RNF41-205ENST00000548225 DPEP1P16444 411 aa19.76■□□□□ 0.75
RNF41-205ENST00000548225 EIF2S2P20042 333 aaKnown RBP19.76■□□□□ 0.75
RNF41-205ENST00000548225 KIF6Q6ZMV9 814 aa19.76■□□□□ 0.75
RNF41-205ENST00000548225 MAP3K15Q6ZN16 1313 aa19.76■□□□□ 0.75
RNF41-205ENST00000548225 PDIA6Q15084 440 aa19.74■□□□□ 0.75
RNF41-205ENST00000548225 WWC1Q8IX03 1113 aa19.74■□□□□ 0.75
RNF41-205ENST00000548225 NGEFQ8N5V2 710 aa19.74■□□□□ 0.75
Retrieved 100 of 20,778 RNA–protein pairs in 382.6 ms