RNA–Protein interactions for RNA: ENST00000548097.5

KRT4-201, Transcript of keratin 4, humanhuman

TSL 1 (best)

Gene KRT4, Length 1,839 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KRT4-201ENST00000548097 HOXB7P09629 217 aa22.05■■□□□ 1.12
KRT4-201ENST00000548097 MYL6BP14649 208 aa22.05■■□□□ 1.12
KRT4-201ENST00000548097 UPF1Q92900 1129 aaKnown RBP eCLIP22.05■■□□□ 1.12
KRT4-201ENST00000548097 SMIM5Q71RC9 77 aa22.04■■□□□ 1.12
KRT4-201ENST00000548097 CAMKK2Q96RR4 588 aa22.04■■□□□ 1.12
KRT4-201ENST00000548097 CENPBP07199 599 aaPredicted RBP22.03■■□□□ 1.12
KRT4-201ENST00000548097 COL5A3P25940 1745 aaPredicted RBP22.03■■□□□ 1.12
KRT4-201ENST00000548097 NBPF26B4DH59 902 aa22.03■■□□□ 1.12
KRT4-201ENST00000548097 CRKLP46109 303 aaKnown RBP22.03■■□□□ 1.12
KRT4-201ENST00000548097 PDIA6Q15084 440 aa22.03■■□□□ 1.12
KRT4-201ENST00000548097 NBPF14Q5TI25 921 aa22.03■■□□□ 1.12
KRT4-201ENST00000548097 CCDC30Q5VVM6 783 aa22.03■■□□□ 1.12
KRT4-201ENST00000548097 NBPF10Q6P3W6 841 aaKnown RBP22.03■■□□□ 1.12
KRT4-201ENST00000548097 NBPF15Q8N660 670 aa22.03■■□□□ 1.12
KRT4-201ENST00000548097 SMC4Q9NTJ3 1288 aa22.03■■□□□ 1.12
KRT4-201ENST00000548097 TAF1LQ8IZX4 1826 aa22.02■■□□□ 1.12
KRT4-201ENST00000548097 STARD3NLO95772 234 aa22.02■■□□□ 1.12
KRT4-201ENST00000548097 SLC4A2P04920 1241 aa22.02■■□□□ 1.12
KRT4-201ENST00000548097 CT47B1P0C2W7 299 aaPredicted RBP22.02■■□□□ 1.12
KRT4-201ENST00000548097 CANXP27824 592 aaKnown RBP22.02■■□□□ 1.12
KRT4-201ENST00000548097 BAG6P46379 1132 aa22.02■■□□□ 1.12
KRT4-201ENST00000548097 TEX13AQ9BXU3 409 aaPredicted RBP22.02■■□□□ 1.12
KRT4-201ENST00000548097 ZBTB1Q9Y2K1 713 aa22.02■■□□□ 1.12
KRT4-201ENST00000548097 ZNF330Q9Y3S2 320 aaPredicted RBP22.02■■□□□ 1.12
KRT4-201ENST00000548097 ZNF831Q5JPB2 1677 aa22.01■■□□□ 1.11
KRT4-201ENST00000548097 MYH14Q7Z406 1995 aaKnown RBP22.01■■□□□ 1.11
KRT4-201ENST00000548097 SLC27A3Q5K4L6 730 aa22.01■■□□□ 1.11
KRT4-201ENST00000548097 INTS5Q6P9B9 1019 aaKnown RBP22.01■■□□□ 1.11
KRT4-201ENST00000548097 G2E3Q7L622 706 aa22.01■■□□□ 1.11
KRT4-201ENST00000548097 PHAXQ9H814 394 aaKnown RBP22.01■■□□□ 1.11
KRT4-201ENST00000548097 SOS1Q07889 1333 aaPredicted RBP22■■□□□ 1.11
KRT4-201ENST00000548097 MRPL50Q8N5N7 158 aaKnown RBP22■■□□□ 1.11
KRT4-201ENST00000548097 STK31Q9BXU1 1019 aa22■■□□□ 1.11
KRT4-201ENST00000548097 CICQ96RK0 1608 aaPredicted RBP22■■□□□ 1.11
KRT4-201ENST00000548097 AMIGO3Q86WK7 504 aa21.99■■□□□ 1.11
KRT4-201ENST00000548097 CCDC87Q9NVE4 849 aa21.99■■□□□ 1.11
KRT4-201ENST00000548097 DBF4Q9UBU7 674 aaPredicted RBP21.99■■□□□ 1.11
KRT4-201ENST00000548097 ALDH1L2Q3SY69 923 aa21.98■■□□□ 1.11
KRT4-201ENST00000548097 CCDC125Q86Z20 511 aa21.98■■□□□ 1.11
KRT4-201ENST00000548097 C4BP0C0L5 1744 aa21.98■■□□□ 1.11
KRT4-201ENST00000548097 RGPD3A6NKT7 1758 aaPredicted RBP21.98■■□□□ 1.11
KRT4-201ENST00000548097 RGPD4Q7Z3J3 1758 aa21.98■■□□□ 1.11
KRT4-201ENST00000548097 PLIN1O60240 522 aa21.97■■□□□ 1.11
KRT4-201ENST00000548097 AIMP1Q12904 312 aaKnown RBP21.97■■□□□ 1.11
KRT4-201ENST00000548097 FRAT1Q92837 279 aaPredicted RBP21.97■■□□□ 1.11
KRT4-201ENST00000548097 DDX21Q9NR30 783 aaKnown RBP eCLIP21.97■■□□□ 1.11
KRT4-201ENST00000548097 LRP10Q7Z4F1 713 aa21.96■■□□□ 1.11
KRT4-201ENST00000548097 ZNF428Q96B54 188 aa21.96■■□□□ 1.11
KRT4-201ENST00000548097 SUPT16HQ9Y5B9 1047 aaKnown RBP21.96■■□□□ 1.11
KRT4-201ENST00000548097 GNPATO15228 680 aa21.96■■□□□ 1.11
KRT4-201ENST00000548097 NOB1Q9ULX3 412 aaKnown RBP21.96■■□□□ 1.11
KRT4-201ENST00000548097 ZNF827Q17R98 1081 aa21.95■■□□□ 1.1
KRT4-201ENST00000548097 TNNQ9UQP3 1299 aa21.95■■□□□ 1.1
KRT4-201ENST00000548097 ARXQ96QS3 562 aa21.94■■□□□ 1.1
KRT4-201ENST00000548097 CNTNAP4Q9C0A0 1308 aa21.94■■□□□ 1.1
KRT4-201ENST00000548097 PHF14O94880 888 aa21.94■■□□□ 1.1
KRT4-201ENST00000548097 COPS6Q7L5N1 327 aa21.94■■□□□ 1.1
KRT4-201ENST00000548097 XAGE3Q8WTP9 111 aa21.94■■□□□ 1.1
KRT4-201ENST00000548097 AK7Q96M32 723 aa21.94■■□□□ 1.1
KRT4-201ENST00000548097 RREB1Q92766 1687 aa21.93■■□□□ 1.1
KRT4-201ENST00000548097 FLIIQ13045 1269 aa21.93■■□□□ 1.1
KRT4-201ENST00000548097 ANO8Q9HCE9 1232 aaPredicted RBP21.93■■□□□ 1.1
KRT4-201ENST00000548097 TTLL7Q6ZT98 887 aa21.92■■□□□ 1.1
KRT4-201ENST00000548097 HYPKQ9NX55 129 aa21.92■■□□□ 1.1
KRT4-201ENST00000548097 NUP188Q5SRE5 1749 aa21.92■■□□□ 1.1
KRT4-201ENST00000548097 ERBB4Q15303 1308 aa21.92■■□□□ 1.1
KRT4-201ENST00000548097 RC3H1Q5TC82 1133 aaKnown RBP21.91■■□□□ 1.1
KRT4-201ENST00000548097 CHMP4AQ9BY43 222 aa21.91■■□□□ 1.1
KRT4-201ENST00000548097 IL6STP40189 918 aaPredicted RBP21.9■■□□□ 1.1
KRT4-201ENST00000548097 EIF5P55010 431 aaKnown RBP21.9■■□□□ 1.1
KRT4-201ENST00000548097 FKBP5Q13451 457 aaPredicted RBP21.9■■□□□ 1.1
KRT4-201ENST00000548097 AKT1S1Q96B36 256 aa21.9■■□□□ 1.1
KRT4-201ENST00000548097 TBC1D2BQ9UPU7 963 aa21.9■■□□□ 1.1
KRT4-201ENST00000548097 F6X3S4 739 aa21.9■■□□□ 1.1
KRT4-201ENST00000548097 RPS6KA4O75676 772 aa21.9■■□□□ 1.1
KRT4-201ENST00000548097 RTCBQ9Y3I0 505 aaKnown RBP21.9■■□□□ 1.1
KRT4-201ENST00000548097 CLUAP1Q96AJ1 413 aa21.89■■□□□ 1.09
KRT4-201ENST00000548097 COL15A1P39059 1388 aa21.88■■□□□ 1.09
KRT4-201ENST00000548097 ZBTB3Q9H5J0 574 aa21.88■■□□□ 1.09
KRT4-201ENST00000548097 TFCP2L1Q9NZI6 479 aa21.88■■□□□ 1.09
KRT4-201ENST00000548097 CACNA1FO60840 1977 aa21.88■■□□□ 1.09
KRT4-201ENST00000548097 UBR3Q6ZT12 1888 aa21.88■■□□□ 1.09
KRT4-201ENST00000548097 KIF16BQ96L93 1317 aa21.88■■□□□ 1.09
KRT4-201ENST00000548097 BRPF1P55201 1214 aaPredicted RBP21.87■■□□□ 1.09
KRT4-201ENST00000548097 RRP1P56182 461 aaKnown RBP21.87■■□□□ 1.09
KRT4-201ENST00000548097 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP21.87■■□□□ 1.09
KRT4-201ENST00000548097 C20orf194Q5TEA3 1177 aa21.87■■□□□ 1.09
KRT4-201ENST00000548097 DZIP3Q86Y13 1208 aaKnown RBP21.87■■□□□ 1.09
KRT4-201ENST00000548097 TUBGCP6Q96RT7 1819 aa21.87■■□□□ 1.09
KRT4-201ENST00000548097 PI4KAP2A4QPH2 592 aa21.86■■□□□ 1.09
KRT4-201ENST00000548097 TRIM27P14373 513 aa21.86■■□□□ 1.09
KRT4-201ENST00000548097 NPM2Q86SE8 214 aaKnown RBP21.86■■□□□ 1.09
KRT4-201ENST00000548097 PI4KAP1Q8N8J0 262 aa21.86■■□□□ 1.09
KRT4-201ENST00000548097 ARHGEF1Q92888 912 aaKnown RBP21.86■■□□□ 1.09
KRT4-201ENST00000548097 ZKSCAN2Q63HK3 967 aa21.85■■□□□ 1.09
KRT4-201ENST00000548097 SRP68Q9UHB9 627 aaKnown RBP21.85■■□□□ 1.09
KRT4-201ENST00000548097 ADCY9O60503 1353 aa21.85■■□□□ 1.09
KRT4-201ENST00000548097 IRX6P78412 446 aaPredicted RBP21.85■■□□□ 1.09
KRT4-201ENST00000548097 SLC15A2Q16348 729 aa21.85■■□□□ 1.09
KRT4-201ENST00000548097 ANKRD13DQ6ZTN6 518 aa21.85■■□□□ 1.09
Retrieved 100 of 20,778 RNA–protein pairs in 11.9 ms