RNA–Protein interactions for RNA: ENST00000547950.1

SCAF11-211, Transcript of SR-related CTD associated factor 11, humanhuman

TSL 2

Gene SCAF11, Length 697 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-211ENST00000547950 NFATC2IPQ8NCF5 419 aa9.08□□□□□ -0.96
SCAF11-211ENST00000547950 DOT1LQ8TEK3 1739 aa9.08□□□□□ -0.96
SCAF11-211ENST00000547950 DIAPH1O60610 1272 aaKnown RBP9.07□□□□□ -0.96
SCAF11-211ENST00000547950 SSFA2P28290 1259 aa9.07□□□□□ -0.96
SCAF11-211ENST00000547950 TRAPPC3LQ5T215 181 aa9.07□□□□□ -0.96
SCAF11-211ENST00000547950 SLC4A9Q96Q91 983 aa9.07□□□□□ -0.96
SCAF11-211ENST00000547950 MAP3K5Q99683 1374 aa9.07□□□□□ -0.96
SCAF11-211ENST00000547950 SHANK3Q9BYB0 1731 aa9.06□□□□□ -0.96
SCAF11-211ENST00000547950 IFNLR1Q8IU57 520 aaPredicted RBP9.06□□□□□ -0.96
SCAF11-211ENST00000547950 ZNF784Q8NCA9 323 aaPredicted RBP9.06□□□□□ -0.96
SCAF11-211ENST00000547950 LGR6Q9HBX8 967 aa9.06□□□□□ -0.96
SCAF11-211ENST00000547950 CIZ1Q9ULV3 898 aaPredicted RBP9.06□□□□□ -0.96
SCAF11-211ENST00000547950 RTCBQ9Y3I0 505 aaKnown RBP9.06□□□□□ -0.96
SCAF11-211ENST00000547950 U2SURPO15042 1029 aaKnown RBP9.05□□□□□ -0.96
SCAF11-211ENST00000547950 PLCG2P16885 1265 aa9.05□□□□□ -0.96
SCAF11-211ENST00000547950 AKAP4Q5JQC9 854 aa9.05□□□□□ -0.96
SCAF11-211ENST00000547950 SPOCK2Q92563 424 aa9.05□□□□□ -0.96
SCAF11-211ENST00000547950 WWC3Q9ULE0 1092 aa9.05□□□□□ -0.96
SCAF11-211ENST00000547950 CD2APQ9Y5K6 639 aa9.05□□□□□ -0.96
SCAF11-211ENST00000547950 GRIN3BO60391 1043 aa9.04□□□□□ -0.96
SCAF11-211ENST00000547950 YBX3P16989 372 aaKnown RBP eCLIP9.04□□□□□ -0.96
SCAF11-211ENST00000547950 MTHFSDQ2M296 383 aaKnown RBP9.04□□□□□ -0.96
SCAF11-211ENST00000547950 ARHGEF1Q92888 912 aaKnown RBP9.04□□□□□ -0.96
SCAF11-211ENST00000547950 FAM163AQ96GL9 167 aaPredicted RBP9.04□□□□□ -0.96
SCAF11-211ENST00000547950 KDM6AO15550 1401 aaPredicted RBP9.04□□□□□ -0.96
SCAF11-211ENST00000547950 KDRP35968 1356 aa9.03□□□□□ -0.96
SCAF11-211ENST00000547950 PLEKHG2Q9H7P9 1386 aa9.03□□□□□ -0.96
SCAF11-211ENST00000547950 RPS6KA4O75676 772 aa9.03□□□□□ -0.96
SCAF11-211ENST00000547950 MMP10P09238 476 aa9.03□□□□□ -0.96
SCAF11-211ENST00000547950 RFC4P35249 363 aa9.03□□□□□ -0.96
SCAF11-211ENST00000547950 SLC39A6Q13433 755 aa9.03□□□□□ -0.96
SCAF11-211ENST00000547950 RC3H1Q5TC82 1133 aaKnown RBP9.03□□□□□ -0.96
SCAF11-211ENST00000547950 ZNF467Q7Z7K2 595 aaPredicted RBP9.03□□□□□ -0.96
SCAF11-211ENST00000547950 NLGN1Q8N2Q7 840 aa9.03□□□□□ -0.96
SCAF11-211ENST00000547950 MAP2P11137 1827 aaKnown RBP9.03□□□□□ -0.96
SCAF11-211ENST00000547950 LY75O60449 1722 aa9.02□□□□□ -0.96
SCAF11-211ENST00000547950 POTEMA6NI47 508 aa9.02□□□□□ -0.97
SCAF11-211ENST00000547950 RNMTO43148 476 aaKnown RBP9.02□□□□□ -0.97
SCAF11-211ENST00000547950 SLC52A2Q9HAB3 445 aa9.02□□□□□ -0.97
SCAF11-211ENST00000547950 CRKLP46109 303 aaKnown RBP9.01□□□□□ -0.97
SCAF11-211ENST00000547950 POTEGQ6S5H5 508 aa9.01□□□□□ -0.97
SCAF11-211ENST00000547950 PKD1L3Q7Z443 1732 aa9.01□□□□□ -0.97
SCAF11-211ENST00000547950 DNAJC10Q8IXB1 793 aa9.01□□□□□ -0.97
SCAF11-211ENST00000547950 CFAP53Q96M91 514 aa9.01□□□□□ -0.97
SCAF11-211ENST00000547950 ANKRD26Q9UPS8 1709 aa9.01□□□□□ -0.97
SCAF11-211ENST00000547950 TOGARAM1Q9Y4F4 1720 aa9.01□□□□□ -0.97
SCAF11-211ENST00000547950 CNTNAP4Q9C0A0 1308 aa9.01□□□□□ -0.97
SCAF11-211ENST00000547950 C4BP0C0L5 1744 aa9□□□□□ -0.97
SCAF11-211ENST00000547950 GYS1P13807 737 aa9□□□□□ -0.97
SCAF11-211ENST00000547950 INTS5Q6P9B9 1019 aaKnown RBP9□□□□□ -0.97
SCAF11-211ENST00000547950 SRP68Q9UHB9 627 aaKnown RBP9□□□□□ -0.97
SCAF11-211ENST00000547950 PARP3Q9Y6F1 533 aa9□□□□□ -0.97
SCAF11-211ENST00000547950 NPC1L1Q9UHC9 1359 aa8.99□□□□□ -0.97
SCAF11-211ENST00000547950 A0A0G2JLW4 131 aa8.99□□□□□ -0.97
SCAF11-211ENST00000547950 PPP2R1AP30153 589 aa8.99□□□□□ -0.97
SCAF11-211ENST00000547950 IRX5P78411 483 aaPredicted RBP8.99□□□□□ -0.97
SCAF11-211ENST00000547950 GOLGA2Q08379 1002 aa8.99□□□□□ -0.97
SCAF11-211ENST00000547950 IL17REQ8NFR9 667 aa8.99□□□□□ -0.97
SCAF11-211ENST00000547950 CCDC87Q9NVE4 849 aa8.99□□□□□ -0.97
SCAF11-211ENST00000547950 C5P01031 1676 aa8.98□□□□□ -0.97
SCAF11-211ENST00000547950 GNAT3A8MTJ3 354 aa8.98□□□□□ -0.97
SCAF11-211ENST00000547950 ZPR1O75312 459 aa8.98□□□□□ -0.97
SCAF11-211ENST00000547950 U2AF1L5P0DN76 240 aaPredicted RBP8.98□□□□□ -0.97
SCAF11-211ENST00000547950 CHRM1P11229 460 aaPredicted RBP8.98□□□□□ -0.97
SCAF11-211ENST00000547950 CYP19A1P11511 503 aaPredicted RBP8.98□□□□□ -0.97
SCAF11-211ENST00000547950 U2AF1Q01081 240 aaKnown RBP eCLIP8.98□□□□□ -0.97
SCAF11-211ENST00000547950 TEFQ10587 303 aa8.98□□□□□ -0.97
SCAF11-211ENST00000547950 TTC5Q8N0Z6 440 aa8.98□□□□□ -0.97
SCAF11-211ENST00000547950 GAS2L2Q8NHY3 880 aa8.98□□□□□ -0.97
SCAF11-211ENST00000547950 PHACTR3Q96KR7 559 aa8.98□□□□□ -0.97
SCAF11-211ENST00000547950 OCEL1Q9H607 264 aa8.98□□□□□ -0.97
SCAF11-211ENST00000547950 NUDCQ9Y266 331 aa8.98□□□□□ -0.97
SCAF11-211ENST00000547950 DPEP1P16444 411 aa8.97□□□□□ -0.97
SCAF11-211ENST00000547950 CANXP27824 592 aaKnown RBP8.97□□□□□ -0.97
SCAF11-211ENST00000547950 PRKAR2BP31323 418 aa8.97□□□□□ -0.97
SCAF11-211ENST00000547950 TGFB2P61812 414 aa8.97□□□□□ -0.97
SCAF11-211ENST00000547950 USPL1Q5W0Q7 1092 aa8.97□□□□□ -0.97
SCAF11-211ENST00000547950 SLAIN1Q8ND83 568 aa8.97□□□□□ -0.97
SCAF11-211ENST00000547950 BCS1LQ9Y276 419 aa8.97□□□□□ -0.97
SCAF11-211ENST00000547950 QSER1Q2KHR3 1735 aa8.97□□□□□ -0.97
SCAF11-211ENST00000547950 ITGB4P16144 1822 aa8.96□□□□□ -0.97
SCAF11-211ENST00000547950 STARD3NLO95772 234 aa8.96□□□□□ -0.98
SCAF11-211ENST00000547950 PSEN1P49768 467 aa8.96□□□□□ -0.98
SCAF11-211ENST00000547950 C1QTNF8P60827 252 aa8.96□□□□□ -0.98
SCAF11-211ENST00000547950 ZNF526Q8TF50 670 aaPredicted RBP8.96□□□□□ -0.98
SCAF11-211ENST00000547950 ZNF496Q96IT1 587 aaPredicted RBP8.96□□□□□ -0.98
SCAF11-211ENST00000547950 RSPH6AQ9H0K4 717 aa8.96□□□□□ -0.98
SCAF11-211ENST00000547950 ZBTB1Q9Y2K1 713 aa8.96□□□□□ -0.98
SCAF11-211ENST00000547950 USP42Q9H9J4 1324 aaKnown RBP8.96□□□□□ -0.98
SCAF11-211ENST00000547950 TUBGCP6Q96RT7 1819 aa8.96□□□□□ -0.98
SCAF11-211ENST00000547950 GIGYF1O75420 1035 aaPredicted RBP8.95□□□□□ -0.98
SCAF11-211ENST00000547950 DDR1Q08345 913 aa8.95□□□□□ -0.98
SCAF11-211ENST00000547950 MKRN3Q13064 507 aaKnown RBP8.95□□□□□ -0.98
SCAF11-211ENST00000547950 ZNF790Q6PG37 636 aa8.95□□□□□ -0.98
SCAF11-211ENST00000547950 ARHGAP27Q6ZUM4 889 aa8.95□□□□□ -0.98
SCAF11-211ENST00000547950 VSIG10Q8N0Z9 540 aa8.95□□□□□ -0.98
SCAF11-211ENST00000547950 ZNF330Q9Y3S2 320 aaPredicted RBP8.95□□□□□ -0.98
SCAF11-211ENST00000547950 SOS1Q07889 1333 aaPredicted RBP8.95□□□□□ -0.98
SCAF11-211ENST00000547950 UTRNP46939 3433 aa8.95□□□□□ -0.98
SCAF11-211ENST00000547950 BTBD11A6QL63 1104 aa8.94□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 105.3 ms