RNA–Protein interactions for RNA: ENST00000547877.5

LETMD1-212, Transcript of LETM1 domain containing 1, humanhuman

TSL 5

Gene LETMD1, Length 2,020 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LETMD1-212ENST00000547877 SLC4A2P04920 1241 aa19.03■□□□□ 0.64
LETMD1-212ENST00000547877 CHPF2Q9P2E5 772 aa19.03■□□□□ 0.64
LETMD1-212ENST00000547877 LY75O60449 1722 aa19.03■□□□□ 0.64
LETMD1-212ENST00000547877 MRPL50Q8N5N7 158 aaKnown RBP19.03■□□□□ 0.64
LETMD1-212ENST00000547877 ZNF831Q5JPB2 1677 aa19.02■□□□□ 0.64
LETMD1-212ENST00000547877 BRPF1P55201 1214 aaPredicted RBP19.02■□□□□ 0.64
LETMD1-212ENST00000547877 DBF4Q9UBU7 674 aaPredicted RBP19.02■□□□□ 0.64
LETMD1-212ENST00000547877 TNS1Q9HBL0 1735 aaKnown RBP19.02■□□□□ 0.64
LETMD1-212ENST00000547877 CICQ96RK0 1608 aaPredicted RBP19.02■□□□□ 0.64
LETMD1-212ENST00000547877 STARD3NLO95772 234 aa19.01■□□□□ 0.63
LETMD1-212ENST00000547877 APBA3O96018 575 aa19.01■□□□□ 0.63
LETMD1-212ENST00000547877 KCNQ4P56696 695 aa19.01■□□□□ 0.63
LETMD1-212ENST00000547877 ITPK1Q13572 414 aa19.01■□□□□ 0.63
LETMD1-212ENST00000547877 FRAT1Q92837 279 aaPredicted RBP19.01■□□□□ 0.63
LETMD1-212ENST00000547877 CCNL1Q9UK58 526 aaPredicted RBP19.01■□□□□ 0.63
LETMD1-212ENST00000547877 PLIN1O60240 522 aa19■□□□□ 0.63
LETMD1-212ENST00000547877 ANXA1P04083 346 aa19■□□□□ 0.63
LETMD1-212ENST00000547877 CYP19A1P11511 503 aaPredicted RBP19■□□□□ 0.63
LETMD1-212ENST00000547877 PDIA6Q15084 440 aa19■□□□□ 0.63
LETMD1-212ENST00000547877 PROSER3Q2NL68 480 aa19■□□□□ 0.63
LETMD1-212ENST00000547877 KIF16BQ96L93 1317 aa19■□□□□ 0.63
LETMD1-212ENST00000547877 CACNA1FO60840 1977 aa19■□□□□ 0.63
LETMD1-212ENST00000547877 A1BGP04217 495 aa19■□□□□ 0.63
LETMD1-212ENST00000547877 PIP4K2AP48426 406 aaPredicted RBP19■□□□□ 0.63
LETMD1-212ENST00000547877 DDX21Q9NR30 783 aaKnown RBP eCLIP19■□□□□ 0.63
LETMD1-212ENST00000547877 NOB1Q9ULX3 412 aaKnown RBP19■□□□□ 0.63
LETMD1-212ENST00000547877 B4GALNT3Q6L9W6 998 aa18.99■□□□□ 0.63
LETMD1-212ENST00000547877 PLSCR1O15162 318 aa18.98■□□□□ 0.63
LETMD1-212ENST00000547877 MYL6BP14649 208 aa18.98■□□□□ 0.63
LETMD1-212ENST00000547877 ERBB4Q15303 1308 aa18.98■□□□□ 0.63
LETMD1-212ENST00000547877 COL5A3P25940 1745 aaPredicted RBP18.98■□□□□ 0.63
LETMD1-212ENST00000547877 NBPF26B4DH59 902 aa18.98■□□□□ 0.63
LETMD1-212ENST00000547877 CANXP27824 592 aaKnown RBP18.98■□□□□ 0.63
LETMD1-212ENST00000547877 NBPF14Q5TI25 921 aa18.98■□□□□ 0.63
LETMD1-212ENST00000547877 NBPF10Q6P3W6 841 aaKnown RBP18.98■□□□□ 0.63
LETMD1-212ENST00000547877 G2E3Q7L622 706 aa18.98■□□□□ 0.63
LETMD1-212ENST00000547877 NBPF15Q8N660 670 aa18.98■□□□□ 0.63
LETMD1-212ENST00000547877 RBM19Q9Y4C8 960 aaKnown RBP18.98■□□□□ 0.63
LETMD1-212ENST00000547877 GOLGA6L2Q8N9W4 650 aaPredicted RBP18.97■□□□□ 0.63
LETMD1-212ENST00000547877 PHAXQ9H814 394 aaKnown RBP18.97■□□□□ 0.63
LETMD1-212ENST00000547877 HYPKQ9NX55 129 aa18.97■□□□□ 0.63
LETMD1-212ENST00000547877 LINC00116Q8NCU8 138 aa18.96■□□□□ 0.63
LETMD1-212ENST00000547877 CCDC136Q96JN2 1154 aa18.96■□□□□ 0.63
LETMD1-212ENST00000547877 LRRC4BQ9NT99 713 aa18.96■□□□□ 0.63
LETMD1-212ENST00000547877 CRKLP46109 303 aaKnown RBP18.96■□□□□ 0.63
LETMD1-212ENST00000547877 FLIIQ13045 1269 aa18.96■□□□□ 0.63
LETMD1-212ENST00000547877 SLC27A3Q5K4L6 730 aa18.96■□□□□ 0.63
LETMD1-212ENST00000547877 LRP10Q7Z4F1 713 aa18.96■□□□□ 0.63
LETMD1-212ENST00000547877 IPO8O15397 1037 aaKnown RBP18.95■□□□□ 0.62
LETMD1-212ENST00000547877 ZKSCAN2Q63HK3 967 aa18.95■□□□□ 0.62
LETMD1-212ENST00000547877 PROM2Q8N271 834 aa18.95■□□□□ 0.62
LETMD1-212ENST00000547877 ZBTB1Q9Y2K1 713 aa18.95■□□□□ 0.62
LETMD1-212ENST00000547877 TAF1LQ8IZX4 1826 aa18.95■□□□□ 0.62
LETMD1-212ENST00000547877 TRIM27P14373 513 aa18.95■□□□□ 0.62
LETMD1-212ENST00000547877 TXNRD1Q16881 649 aa18.95■□□□□ 0.62
LETMD1-212ENST00000547877 INTS5Q6P9B9 1019 aaKnown RBP18.95■□□□□ 0.62
LETMD1-212ENST00000547877 ATF7IPQ6VMQ6 1270 aa18.95■□□□□ 0.62
LETMD1-212ENST00000547877 MYH14Q7Z406 1995 aaKnown RBP18.94■□□□□ 0.62
LETMD1-212ENST00000547877 PTPRCP08575 1304 aa18.94■□□□□ 0.62
LETMD1-212ENST00000547877 ARHGAP45Q92619 1136 aa18.94■□□□□ 0.62
LETMD1-212ENST00000547877 CCDC87Q9NVE4 849 aa18.94■□□□□ 0.62
LETMD1-212ENST00000547877 RGPD3A6NKT7 1758 aaPredicted RBP18.94■□□□□ 0.62
LETMD1-212ENST00000547877 RGPD4Q7Z3J3 1758 aa18.94■□□□□ 0.62
LETMD1-212ENST00000547877 SF3B2Q13435 895 aaKnown RBP18.93■□□□□ 0.62
LETMD1-212ENST00000547877 FKBP5Q13451 457 aaPredicted RBP18.93■□□□□ 0.62
LETMD1-212ENST00000547877 TNNQ9UQP3 1299 aa18.93■□□□□ 0.62
LETMD1-212ENST00000547877 RREB1Q92766 1687 aa18.92■□□□□ 0.62
LETMD1-212ENST00000547877 CNTNAP4Q9C0A0 1308 aa18.92■□□□□ 0.62
LETMD1-212ENST00000547877 AIMP1Q12904 312 aaKnown RBP18.92■□□□□ 0.62
LETMD1-212ENST00000547877 C20orf194Q5TEA3 1177 aa18.92■□□□□ 0.62
LETMD1-212ENST00000547877 COPS6Q7L5N1 327 aa18.92■□□□□ 0.62
LETMD1-212ENST00000547877 CLUAP1Q96AJ1 413 aa18.92■□□□□ 0.62
LETMD1-212ENST00000547877 ZNF330Q9Y3S2 320 aaPredicted RBP18.92■□□□□ 0.62
LETMD1-212ENST00000547877 XAGE3Q8WTP9 111 aa18.91■□□□□ 0.62
LETMD1-212ENST00000547877 C4BP0C0L5 1744 aa18.91■□□□□ 0.62
LETMD1-212ENST00000547877 EN1Q05925 392 aaPredicted RBP18.91■□□□□ 0.62
LETMD1-212ENST00000547877 IL6STP40189 918 aaPredicted RBP18.9■□□□□ 0.62
LETMD1-212ENST00000547877 RC3H1Q5TC82 1133 aaKnown RBP18.9■□□□□ 0.62
LETMD1-212ENST00000547877 API5Q9BZZ5 524 aaKnown RBP18.9■□□□□ 0.62
LETMD1-212ENST00000547877 RLBP1P12271 317 aa18.9■□□□□ 0.62
LETMD1-212ENST00000547877 CCDC125Q86Z20 511 aa18.9■□□□□ 0.62
LETMD1-212ENST00000547877 FTSJ3Q8IY81 847 aaKnown RBP18.9■□□□□ 0.62
LETMD1-212ENST00000547877 CAMKK2Q96RR4 588 aa18.9■□□□□ 0.62
LETMD1-212ENST00000547877 F6X3S4 739 aa18.89■□□□□ 0.61
LETMD1-212ENST00000547877 BAG6P46379 1132 aa18.89■□□□□ 0.61
LETMD1-212ENST00000547877 PDE3AQ14432 1141 aa18.89■□□□□ 0.61
LETMD1-212ENST00000547877 EZH2Q15910 746 aaKnown RBP18.89■□□□□ 0.61
LETMD1-212ENST00000547877 DZIP1LQ8IYY4 767 aaKnown RBP18.89■□□□□ 0.61
LETMD1-212ENST00000547877 PANK1Q8TE04 598 aa18.89■□□□□ 0.61
LETMD1-212ENST00000547877 PI4KAP2A4QPH2 592 aa18.88■□□□□ 0.61
LETMD1-212ENST00000547877 EIF5P55010 431 aaKnown RBP18.88■□□□□ 0.61
LETMD1-212ENST00000547877 DEFB132Q7Z7B7 95 aa18.88■□□□□ 0.61
LETMD1-212ENST00000547877 PI4KAP1Q8N8J0 262 aa18.88■□□□□ 0.61
LETMD1-212ENST00000547877 DDX58O95786 925 aaKnown RBP18.88■□□□□ 0.61
LETMD1-212ENST00000547877 TTLL7Q6ZT98 887 aa18.88■□□□□ 0.61
LETMD1-212ENST00000547877 NPM2Q86SE8 214 aaKnown RBP18.88■□□□□ 0.61
LETMD1-212ENST00000547877 ADCY9O60503 1353 aa18.88■□□□□ 0.61
LETMD1-212ENST00000547877 ABCC4O15439 1325 aa18.87■□□□□ 0.61
LETMD1-212ENST00000547877 GNPATO15228 680 aa18.87■□□□□ 0.61
LETMD1-212ENST00000547877 MS4A1P11836 297 aa18.87■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 67.6 ms