RNA–Protein interactions for RNA: ENST00000547654.5

SCAF11-210, Transcript of SR-related CTD associated factor 11, humanhuman

TSL 2

Gene SCAF11, Length 416 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-210ENST00000547654 C1orf216Q8TAB5 229 aa8.44□□□□□ -1.06
SCAF11-210ENST00000547654 AIDAQ96BJ3 306 aa8.44□□□□□ -1.06
SCAF11-210ENST00000547654 NIFKQ9BYG3 293 aaKnown RBP8.44□□□□□ -1.06
SCAF11-210ENST00000547654 COG6Q9Y2V7 657 aa8.44□□□□□ -1.06
SCAF11-210ENST00000547654 PCDHGC4Q9Y5F7 938 aa8.44□□□□□ -1.06
SCAF11-210ENST00000547654 NEURL1BA8MQ27 555 aa8.43□□□□□ -1.06
SCAF11-210ENST00000547654 EPXP11678 715 aa8.43□□□□□ -1.06
SCAF11-210ENST00000547654 ATP4AP20648 1035 aa8.43□□□□□ -1.06
SCAF11-210ENST00000547654 NBPF1Q3BBV0 1214 aa8.43□□□□□ -1.06
SCAF11-210ENST00000547654 GDPD2Q9HCC8 539 aa8.43□□□□□ -1.06
SCAF11-210ENST00000547654 NOP53Q9NZM5 478 aaKnown RBP8.43□□□□□ -1.06
SCAF11-210ENST00000547654 KRTAP4-8A0A0G2JLE6 195 aa8.42□□□□□ -1.06
SCAF11-210ENST00000547654 INHAP05111 366 aa8.42□□□□□ -1.06
SCAF11-210ENST00000547654 SCNN1DP51172 638 aa8.42□□□□□ -1.06
SCAF11-210ENST00000547654 VAC14Q08AM6 782 aa8.42□□□□□ -1.06
SCAF11-210ENST00000547654 ARSJQ5FYB0 599 aaPredicted RBP8.42□□□□□ -1.06
SCAF11-210ENST00000547654 NLRP8Q86W28 1048 aa8.42□□□□□ -1.06
SCAF11-210ENST00000547654 POM121Q96HA1 1249 aa8.42□□□□□ -1.06
SCAF11-210ENST00000547654 ZCCHC2Q9C0B9 1178 aaKnown RBP8.42□□□□□ -1.06
SCAF11-210ENST00000547654 SUV39H2Q9H5I1 410 aa8.42□□□□□ -1.06
SCAF11-210ENST00000547654 DCDC2BA2VCK2 349 aa8.41□□□□□ -1.06
SCAF11-210ENST00000547654 ATXN7O15265 892 aaPredicted RBP8.41□□□□□ -1.06
SCAF11-210ENST00000547654 LINC00114Q6XXX2 140 aa8.41□□□□□ -1.06
SCAF11-210ENST00000547654 DNAAF2Q9NVR5 837 aaKnown RBP8.41□□□□□ -1.06
SCAF11-210ENST00000547654 FURINP09958 794 aa8.4□□□□□ -1.06
SCAF11-210ENST00000547654 TATP17735 454 aaPredicted RBP8.4□□□□□ -1.06
SCAF11-210ENST00000547654 ADH6P28332 368 aa8.4□□□□□ -1.06
SCAF11-210ENST00000547654 ABL2P42684 1182 aa8.4□□□□□ -1.06
SCAF11-210ENST00000547654 SMTNP53814 917 aa8.4□□□□□ -1.06
SCAF11-210ENST00000547654 MAP7D1Q3KQU3 841 aa8.4□□□□□ -1.06
SCAF11-210ENST00000547654 PLPP7Q8NBV4 271 aa8.4□□□□□ -1.06
SCAF11-210ENST00000547654 BTBD6Q96KE9 485 aa8.4□□□□□ -1.06
SCAF11-210ENST00000547654 GJA3Q9Y6H8 435 aa8.4□□□□□ -1.06
SCAF11-210ENST00000547654 HOXB4P17483 251 aaPredicted RBP8.39□□□□□ -1.07
SCAF11-210ENST00000547654 DGKGP49619 791 aa8.39□□□□□ -1.07
SCAF11-210ENST00000547654 SERTAD1Q9UHV2 236 aa8.39□□□□□ -1.07
SCAF11-210ENST00000547654 A0A1W2PNR3 127 aa8.38□□□□□ -1.07
SCAF11-210ENST00000547654 KHNYNO15037 678 aaKnown RBP8.38□□□□□ -1.07
SCAF11-210ENST00000547654 CD33P20138 364 aa8.38□□□□□ -1.07
SCAF11-210ENST00000547654 CHSY3Q70JA7 882 aa8.38□□□□□ -1.07
SCAF11-210ENST00000547654 MAPTP10636 758 aaKnown RBP8.37□□□□□ -1.07
SCAF11-210ENST00000547654 SEMA3FQ13275 785 aa8.37□□□□□ -1.07
SCAF11-210ENST00000547654 WASHC4Q2M389 1173 aa8.37□□□□□ -1.07
SCAF11-210ENST00000547654 BTBD11A6QL63 1104 aa8.36□□□□□ -1.07
SCAF11-210ENST00000547654 C1QTNF9BB2RNN3 333 aa8.36□□□□□ -1.07
SCAF11-210ENST00000547654 TNP2Q05952 138 aa8.36□□□□□ -1.07
SCAF11-210ENST00000547654 FNBP4Q8N3X1 1017 aaPredicted RBP8.36□□□□□ -1.07
SCAF11-210ENST00000547654 ZDHHC3Q9NYG2 299 aa8.36□□□□□ -1.07
SCAF11-210ENST00000547654 PRR12Q9ULL5 1215 aa8.36□□□□□ -1.07
SCAF11-210ENST00000547654 SOX11P35716 441 aa8.35□□□□□ -1.07
SCAF11-210ENST00000547654 FAM182BQ5T319 152 aa8.35□□□□□ -1.07
SCAF11-210ENST00000547654 BICDL1Q6ZP65 573 aa8.35□□□□□ -1.07
SCAF11-210ENST00000547654 CD163Q86VB7 1156 aa8.35□□□□□ -1.07
SCAF11-210ENST00000547654 ADAMTS19Q8TE59 1207 aa8.35□□□□□ -1.07
SCAF11-210ENST00000547654 ALG2Q9H553 416 aa8.35□□□□□ -1.07
SCAF11-210ENST00000547654 AVENQ9NQS1 362 aaPredicted RBP8.35□□□□□ -1.07
SCAF11-210ENST00000547654 CABP1Q9NZU7 370 aa8.35□□□□□ -1.07
SCAF11-210ENST00000547654 A6NJY4 79 aa8.34□□□□□ -1.07
SCAF11-210ENST00000547654 FAM157BP0CG42 384 aa8.34□□□□□ -1.07
SCAF11-210ENST00000547654 TMEM229AB2RXF0 380 aa8.33□□□□□ -1.08
SCAF11-210ENST00000547654 CDK2AP1O14519 115 aa8.33□□□□□ -1.08
SCAF11-210ENST00000547654 CHRNA4P43681 627 aa8.33□□□□□ -1.08
SCAF11-210ENST00000547654 ZNF468Q5VIY5 522 aaPredicted RBP8.33□□□□□ -1.08
SCAF11-210ENST00000547654 FCHSD1Q86WN1 690 aa8.33□□□□□ -1.08
SCAF11-210ENST00000547654 PCBP4P57723 403 aaKnown RBP8.32□□□□□ -1.08
SCAF11-210ENST00000547654 PSME1Q06323 249 aa8.32□□□□□ -1.08
SCAF11-210ENST00000547654 MTFR1Q15390 333 aa8.32□□□□□ -1.08
SCAF11-210ENST00000547654 SLC4A9Q96Q91 983 aa8.32□□□□□ -1.08
SCAF11-210ENST00000547654 IQSEC3Q9UPP2 1182 aaPredicted RBP8.32□□□□□ -1.08
SCAF11-210ENST00000547654 USP3Q9Y6I4 520 aa8.32□□□□□ -1.08
SCAF11-210ENST00000547654 BACH1O14867 736 aa8.31□□□□□ -1.08
SCAF11-210ENST00000547654 FLIIQ13045 1269 aa8.31□□□□□ -1.08
SCAF11-210ENST00000547654 EML3Q32P44 896 aa8.31□□□□□ -1.08
SCAF11-210ENST00000547654 ZNF295-AS1Q8N0V1 137 aa8.31□□□□□ -1.08
SCAF11-210ENST00000547654 ZIC5Q96T25 663 aa8.31□□□□□ -1.08
SCAF11-210ENST00000547654 MARK1Q9P0L2 795 aa8.31□□□□□ -1.08
SCAF11-210ENST00000547654 KLF15Q9UIH9 416 aa8.31□□□□□ -1.08
SCAF11-210ENST00000547654 SAMD5Q5TGI4 173 aa8.3□□□□□ -1.08
SCAF11-210ENST00000547654 PARP3Q9Y6F1 533 aa8.3□□□□□ -1.08
SCAF11-210ENST00000547654 POM121CA8CG34 1229 aa8.29□□□□□ -1.08
SCAF11-210ENST00000547654 PIK3CDO00329 1044 aa8.29□□□□□ -1.08
SCAF11-210ENST00000547654 LAMC2Q13753 1193 aa8.29□□□□□ -1.08
SCAF11-210ENST00000547654 HCN2Q9UL51 889 aa8.29□□□□□ -1.08
SCAF11-210ENST00000547654 NOD1Q9Y239 953 aa8.29□□□□□ -1.08
SCAF11-210ENST00000547654 SPATA31C1P0DKV0 1188 aa8.28□□□□□ -1.08
SCAF11-210ENST00000547654 SKIP12755 728 aa8.28□□□□□ -1.08
SCAF11-210ENST00000547654 ALAS2P22557 587 aa8.28□□□□□ -1.08
SCAF11-210ENST00000547654 GTF2IP78347 998 aa8.28□□□□□ -1.08
SCAF11-210ENST00000547654 TRIM11Q96F44 468 aa8.28□□□□□ -1.08
SCAF11-210ENST00000547654 PLVAPQ9BX97 442 aa8.28□□□□□ -1.08
SCAF11-210ENST00000547654 PCDHGA11Q9Y5H2 935 aa8.28□□□□□ -1.08
SCAF11-210ENST00000547654 ELOA3CA0A087WX78 387 aaPredicted RBP8.27□□□□□ -1.09
SCAF11-210ENST00000547654 SPDYE3A6NKU9 549 aa8.27□□□□□ -1.09
SCAF11-210ENST00000547654 ELOA3DA6NLF2 546 aaPredicted RBP8.27□□□□□ -1.09
SCAF11-210ENST00000547654 TXLNAP40222 546 aa8.27□□□□□ -1.09
SCAF11-210ENST00000547654 DOC2BQ14184 412 aa8.27□□□□□ -1.09
SCAF11-210ENST00000547654 ELOA3BQ3SY89 546 aa8.27□□□□□ -1.09
SCAF11-210ENST00000547654 ELOA3Q8NG57 546 aa8.27□□□□□ -1.09
SCAF11-210ENST00000547654 NEUROD4Q9HD90 331 aa8.27□□□□□ -1.09
SCAF11-210ENST00000547654 STRN4Q9NRL3 753 aa8.27□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 162 ms