RNA–Protein interactions for RNA: ENST00000547063.5

TRAFD1-203, Transcript of TRAF-type zinc finger domain containing 1, humanhuman

TSL 3

Gene TRAFD1, Length 867 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAFD1-203ENST00000547063 PRAMEF22A3QJZ6 481 aa20.22■□□□□ 0.83
TRAFD1-203ENST00000547063 NEFLP07196 543 aa20.22■□□□□ 0.83
TRAFD1-203ENST00000547063 ZKSCAN2Q63HK3 967 aa20.22■□□□□ 0.83
TRAFD1-203ENST00000547063 NECTIN2Q92692 538 aa20.22■□□□□ 0.83
TRAFD1-203ENST00000547063 FRAT1Q92837 279 aaPredicted RBP20.22■□□□□ 0.83
TRAFD1-203ENST00000547063 DDX21Q9NR30 783 aaKnown RBP eCLIP20.22■□□□□ 0.83
TRAFD1-203ENST00000547063 HYPKQ9NX55 129 aa20.22■□□□□ 0.83
TRAFD1-203ENST00000547063 TCERG1O14776 1098 aaKnown RBP20.21■□□□□ 0.83
TRAFD1-203ENST00000547063 PTF1AQ7RTS3 328 aa20.21■□□□□ 0.83
TRAFD1-203ENST00000547063 DNAJC10Q8IXB1 793 aa20.21■□□□□ 0.83
TRAFD1-203ENST00000547063 CHPF2Q9P2E5 772 aa20.21■□□□□ 0.83
TRAFD1-203ENST00000547063 LY75O60449 1722 aa20.21■□□□□ 0.83
TRAFD1-203ENST00000547063 PTPRCP08575 1304 aa20.21■□□□□ 0.83
TRAFD1-203ENST00000547063 TJP1Q07157 1748 aa20.2■□□□□ 0.82
TRAFD1-203ENST00000547063 SLC4A9Q96Q91 983 aa20.19■□□□□ 0.82
TRAFD1-203ENST00000547063 API5Q9BZZ5 524 aaKnown RBP20.19■□□□□ 0.82
TRAFD1-203ENST00000547063 NOB1Q9ULX3 412 aaKnown RBP20.19■□□□□ 0.82
TRAFD1-203ENST00000547063 PLSCR1O15162 318 aa20.18■□□□□ 0.82
TRAFD1-203ENST00000547063 CYP19A1P11511 503 aaPredicted RBP20.18■□□□□ 0.82
TRAFD1-203ENST00000547063 PDE3AQ14432 1141 aa20.18■□□□□ 0.82
TRAFD1-203ENST00000547063 SLC27A3Q5K4L6 730 aa20.18■□□□□ 0.82
TRAFD1-203ENST00000547063 ATF7IPQ6VMQ6 1270 aa20.18■□□□□ 0.82
TRAFD1-203ENST00000547063 CCNL1Q9UK58 526 aaPredicted RBP20.18■□□□□ 0.82
TRAFD1-203ENST00000547063 FLIIQ13045 1269 aa20.17■□□□□ 0.82
TRAFD1-203ENST00000547063 DDX58O95786 925 aaKnown RBP20.16■□□□□ 0.82
TRAFD1-203ENST00000547063 APBA3O96018 575 aa20.16■□□□□ 0.82
TRAFD1-203ENST00000547063 SF3B2Q13435 895 aaKnown RBP20.16■□□□□ 0.82
TRAFD1-203ENST00000547063 PDIA6Q15084 440 aa20.16■□□□□ 0.82
TRAFD1-203ENST00000547063 NPM2Q86SE8 214 aaKnown RBP20.16■□□□□ 0.82
TRAFD1-203ENST00000547063 PLIN1O60240 522 aa20.15■□□□□ 0.82
TRAFD1-203ENST00000547063 FTSJ3Q8IY81 847 aaKnown RBP20.15■□□□□ 0.82
TRAFD1-203ENST00000547063 CCDC87Q9NVE4 849 aa20.15■□□□□ 0.82
TRAFD1-203ENST00000547063 COL5A3P25940 1745 aaPredicted RBP20.15■□□□□ 0.82
TRAFD1-203ENST00000547063 TNS1Q9HBL0 1735 aaKnown RBP20.15■□□□□ 0.82
TRAFD1-203ENST00000547063 RGPD3A6NKT7 1758 aaPredicted RBP20.15■□□□□ 0.82
TRAFD1-203ENST00000547063 RGPD4Q7Z3J3 1758 aa20.15■□□□□ 0.82
TRAFD1-203ENST00000547063 A1BGP04217 495 aa20.14■□□□□ 0.81
TRAFD1-203ENST00000547063 TRIM27P14373 513 aa20.14■□□□□ 0.81
TRAFD1-203ENST00000547063 MYL6BP14649 208 aa20.14■□□□□ 0.81
TRAFD1-203ENST00000547063 FKBP5Q13451 457 aaPredicted RBP20.14■□□□□ 0.81
TRAFD1-203ENST00000547063 ITPK1Q13572 414 aa20.14■□□□□ 0.81
TRAFD1-203ENST00000547063 RC3H1Q5TC82 1133 aaKnown RBP20.14■□□□□ 0.81
TRAFD1-203ENST00000547063 DZIP1LQ8IYY4 767 aaKnown RBP20.14■□□□□ 0.81
TRAFD1-203ENST00000547063 CNTNAP4Q9C0A0 1308 aa20.13■□□□□ 0.81
TRAFD1-203ENST00000547063 CRKLP46109 303 aaKnown RBP20.13■□□□□ 0.81
TRAFD1-203ENST00000547063 CCDC125Q86Z20 511 aa20.13■□□□□ 0.81
TRAFD1-203ENST00000547063 NBPF26B4DH59 902 aa20.12■□□□□ 0.81
TRAFD1-203ENST00000547063 IL6STP40189 918 aaPredicted RBP20.12■□□□□ 0.81
TRAFD1-203ENST00000547063 PROSER3Q2NL68 480 aa20.12■□□□□ 0.81
TRAFD1-203ENST00000547063 NBPF14Q5TI25 921 aa20.12■□□□□ 0.81
TRAFD1-203ENST00000547063 NBPF10Q6P3W6 841 aaKnown RBP20.12■□□□□ 0.81
TRAFD1-203ENST00000547063 G2E3Q7L622 706 aa20.12■□□□□ 0.81
TRAFD1-203ENST00000547063 NBPF15Q8N660 670 aa20.12■□□□□ 0.81
TRAFD1-203ENST00000547063 PHAXQ9H814 394 aaKnown RBP20.12■□□□□ 0.81
TRAFD1-203ENST00000547063 RREB1Q92766 1687 aa20.12■□□□□ 0.81
TRAFD1-203ENST00000547063 TAF1LQ8IZX4 1826 aa20.11■□□□□ 0.81
TRAFD1-203ENST00000547063 ANXA1P04083 346 aa20.11■□□□□ 0.81
TRAFD1-203ENST00000547063 TXNRD1Q16881 649 aa20.1■□□□□ 0.81
TRAFD1-203ENST00000547063 COPS6Q7L5N1 327 aa20.1■□□□□ 0.81
TRAFD1-203ENST00000547063 LRP10Q7Z4F1 713 aa20.1■□□□□ 0.81
TRAFD1-203ENST00000547063 LINC00116Q8NCU8 138 aa20.1■□□□□ 0.81
TRAFD1-203ENST00000547063 XAGE3Q8WTP9 111 aa20.1■□□□□ 0.81
TRAFD1-203ENST00000547063 ABCC4O15439 1325 aa20.09■□□□□ 0.81
TRAFD1-203ENST00000547063 BAG6P46379 1132 aa20.09■□□□□ 0.81
TRAFD1-203ENST00000547063 AIMP1Q12904 312 aaKnown RBP20.09■□□□□ 0.81
TRAFD1-203ENST00000547063 INTS5Q6P9B9 1019 aaKnown RBP20.09■□□□□ 0.81
TRAFD1-203ENST00000547063 KSR2Q6VAB6 950 aa20.09■□□□□ 0.81
TRAFD1-203ENST00000547063 CLUAP1Q96AJ1 413 aa20.09■□□□□ 0.81
TRAFD1-203ENST00000547063 CHMP4BQ9H444 224 aaKnown RBP20.09■□□□□ 0.81
TRAFD1-203ENST00000547063 ZBTB1Q9Y2K1 713 aa20.09■□□□□ 0.81
TRAFD1-203ENST00000547063 PXDNLA1KZ92 1463 aa20.08■□□□□ 0.81
TRAFD1-203ENST00000547063 A0A087WZG4 1122 aa20.08■□□□□ 0.81
TRAFD1-203ENST00000547063 PIP4K2AP48426 406 aaPredicted RBP20.08■□□□□ 0.81
TRAFD1-203ENST00000547063 ERICH6BQ5W0A0 696 aa20.08■□□□□ 0.81
TRAFD1-203ENST00000547063 ANKRD13DQ6ZTN6 518 aa20.08■□□□□ 0.81
TRAFD1-203ENST00000547063 CCT4P50991 539 aaKnown RBP20.07■□□□□ 0.8
TRAFD1-203ENST00000547063 KIF6Q6ZMV9 814 aa20.07■□□□□ 0.8
TRAFD1-203ENST00000547063 RIC3Q7Z5B4 369 aa20.07■□□□□ 0.8
TRAFD1-203ENST00000547063 PLBD2Q8NHP8 589 aa20.07■□□□□ 0.8
TRAFD1-203ENST00000547063 ZNF330Q9Y3S2 320 aaPredicted RBP20.07■□□□□ 0.8
TRAFD1-203ENST00000547063 C4BP0C0L5 1744 aa20.07■□□□□ 0.8
TRAFD1-203ENST00000547063 MYH14Q7Z406 1995 aaKnown RBP20.06■□□□□ 0.8
TRAFD1-203ENST00000547063 PI4KAP2A4QPH2 592 aa20.06■□□□□ 0.8
TRAFD1-203ENST00000547063 EIF5P55010 431 aaKnown RBP20.06■□□□□ 0.8
TRAFD1-203ENST00000547063 KCNQ4P56696 695 aa20.06■□□□□ 0.8
TRAFD1-203ENST00000547063 C20orf194Q5TEA3 1177 aa20.06■□□□□ 0.8
TRAFD1-203ENST00000547063 PI4KAP1Q8N8J0 262 aa20.06■□□□□ 0.8
TRAFD1-203ENST00000547063 PANK1Q8TE04 598 aa20.06■□□□□ 0.8
TRAFD1-203ENST00000547063 DNAAF4Q8WXU2 420 aa20.06■□□□□ 0.8
TRAFD1-203ENST00000547063 LRRC4BQ9NT99 713 aa20.06■□□□□ 0.8
TRAFD1-203ENST00000547063 RPS6KA4O75676 772 aa20.05■□□□□ 0.8
TRAFD1-203ENST00000547063 NEXNQ0ZGT2 675 aa20.05■□□□□ 0.8
TRAFD1-203ENST00000547063 AAMPQ13685 434 aa20.05■□□□□ 0.8
TRAFD1-203ENST00000547063 MVPQ14764 893 aaKnown RBP20.05■□□□□ 0.8
TRAFD1-203ENST00000547063 INTS3Q68E01 1043 aaKnown RBP20.05■□□□□ 0.8
TRAFD1-203ENST00000547063 AK7Q96M32 723 aa20.05■□□□□ 0.8
TRAFD1-203ENST00000547063 DDX19BQ9UMR2 479 aa20.05■□□□□ 0.8
TRAFD1-203ENST00000547063 RLBP1P12271 317 aa20.04■□□□□ 0.8
TRAFD1-203ENST00000547063 FKBP8Q14318 412 aa20.04■□□□□ 0.8
TRAFD1-203ENST00000547063 SLC4A10Q6U841 1118 aa20.04■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms