RNA–Protein interactions for RNA: ENST00000546697.1

SSH1-204, Transcript of slingshot protein phosphatase 1, humanhuman

TSL 3

Gene SSH1, Length 583 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSH1-204ENST00000546697 C10orf71Q711Q0 1435 aa20.29■□□□□ 0.84
SSH1-204ENST00000546697 DCAF8L1A6NGE4 600 aa20.29■□□□□ 0.84
SSH1-204ENST00000546697 KCNQ3O43525 872 aa20.29■□□□□ 0.84
SSH1-204ENST00000546697 MMP10P09238 476 aa20.29■□□□□ 0.84
SSH1-204ENST00000546697 DCTN1Q14203 1278 aa20.29■□□□□ 0.84
SSH1-204ENST00000546697 NLGN2Q8NFZ4 835 aa20.29■□□□□ 0.84
SSH1-204ENST00000546697 PNISRQ8TF01 805 aaKnown RBP20.29■□□□□ 0.84
SSH1-204ENST00000546697 NARFQ9UHQ1 456 aa20.29■□□□□ 0.84
SSH1-204ENST00000546697 MAPK8IP3Q9UPT6 1336 aa20.28■□□□□ 0.84
SSH1-204ENST00000546697 KIAA1551Q9HCM1 1747 aa20.28■□□□□ 0.84
SSH1-204ENST00000546697 BABAM1Q9NWV8 329 aa20.28■□□□□ 0.84
SSH1-204ENST00000546697 TM4SF1P30408 202 aa20.27■□□□□ 0.84
SSH1-204ENST00000546697 IL6STP40189 918 aaPredicted RBP20.27■□□□□ 0.84
SSH1-204ENST00000546697 TMPOP42166 694 aaKnown RBP20.26■□□□□ 0.83
SSH1-204ENST00000546697 NRXN2Q9P2S2 1712 aa20.26■□□□□ 0.83
SSH1-204ENST00000546697 RGL2O15211 777 aa20.25■□□□□ 0.83
SSH1-204ENST00000546697 SNRPA1P09661 255 aaKnown RBP20.25■□□□□ 0.83
SSH1-204ENST00000546697 FKBP8Q14318 412 aa20.25■□□□□ 0.83
SSH1-204ENST00000546697 BCL2L12Q9HB09 334 aa20.25■□□□□ 0.83
SSH1-204ENST00000546697 SRP68Q9UHB9 627 aaKnown RBP20.25■□□□□ 0.83
SSH1-204ENST00000546697 SCN7AQ01118 1682 aa20.25■□□□□ 0.83
SSH1-204ENST00000546697 LAMB4A4D0S4 1761 aa20.24■□□□□ 0.83
SSH1-204ENST00000546697 A0A087WZG4 1122 aa20.24■□□□□ 0.83
SSH1-204ENST00000546697 RUNDC1Q96C34 613 aa20.24■□□□□ 0.83
SSH1-204ENST00000546697 ADAMTS8Q9UP79 889 aa20.24■□□□□ 0.83
SSH1-204ENST00000546697 TGFB2P61812 414 aa20.23■□□□□ 0.83
SSH1-204ENST00000546697 LMOD3Q0VAK6 560 aa20.23■□□□□ 0.83
SSH1-204ENST00000546697 USP16Q9Y5T5 823 aa20.23■□□□□ 0.83
SSH1-204ENST00000546697 PXDNLA1KZ92 1463 aa20.23■□□□□ 0.83
SSH1-204ENST00000546697 ZPR1O75312 459 aa20.22■□□□□ 0.83
SSH1-204ENST00000546697 RIPK4P57078 832 aa20.22■□□□□ 0.83
SSH1-204ENST00000546697 DDR1Q08345 913 aa20.22■□□□□ 0.83
SSH1-204ENST00000546697 USPL1Q5W0Q7 1092 aa20.22■□□□□ 0.83
SSH1-204ENST00000546697 CHD4Q14839 1912 aa20.21■□□□□ 0.83
SSH1-204ENST00000546697 POLRMTO00411 1230 aaKnown RBP20.21■□□□□ 0.83
SSH1-204ENST00000546697 EIF4A1P60842 406 aaKnown RBP20.21■□□□□ 0.83
SSH1-204ENST00000546697 WDR43Q15061 677 aaKnown RBP eCLIP20.21■□□□□ 0.83
SSH1-204ENST00000546697 GIGYF1O75420 1035 aaPredicted RBP20.2■□□□□ 0.82
SSH1-204ENST00000546697 CANXP27824 592 aaKnown RBP20.2■□□□□ 0.82
SSH1-204ENST00000546697 PARP3Q9Y6F1 533 aa20.2■□□□□ 0.82
SSH1-204ENST00000546697 BCORQ6W2J9 1755 aa20.2■□□□□ 0.82
SSH1-204ENST00000546697 A1BGP04217 495 aa20.19■□□□□ 0.82
SSH1-204ENST00000546697 YBX3P16989 372 aaKnown RBP eCLIP20.19■□□□□ 0.82
SSH1-204ENST00000546697 TRIM35Q9UPQ4 493 aa20.19■□□□□ 0.82
SSH1-204ENST00000546697 BRCA1P38398 1863 aaKnown RBP20.19■□□□□ 0.82
SSH1-204ENST00000546697 PRAMEF22A3QJZ6 481 aa20.18■□□□□ 0.82
SSH1-204ENST00000546697 GRIN3BO60391 1043 aa20.18■□□□□ 0.82
SSH1-204ENST00000546697 NFIXQ14938 502 aa20.18■□□□□ 0.82
SSH1-204ENST00000546697 KLHL34Q8N239 644 aa20.18■□□□□ 0.82
SSH1-204ENST00000546697 THUMPD2Q9BTF0 503 aaKnown RBP20.18■□□□□ 0.82
SSH1-204ENST00000546697 NBPF26B4DH59 902 aa20.17■□□□□ 0.82
SSH1-204ENST00000546697 GPR162Q16538 588 aa20.17■□□□□ 0.82
SSH1-204ENST00000546697 NBPF10Q6P3W6 841 aaKnown RBP20.17■□□□□ 0.82
SSH1-204ENST00000546697 NBPF15Q8N660 670 aa20.17■□□□□ 0.82
SSH1-204ENST00000546697 AFDNP55196 1824 aaKnown RBP20.16■□□□□ 0.82
SSH1-204ENST00000546697 CHL1O00533 1208 aa20.16■□□□□ 0.82
SSH1-204ENST00000546697 CAMTA2O94983 1202 aa20.16■□□□□ 0.82
SSH1-204ENST00000546697 CLEC4GQ6UXB4 293 aa20.16■□□□□ 0.82
SSH1-204ENST00000546697 MIS18AQ9NYP9 233 aa20.16■□□□□ 0.82
SSH1-204ENST00000546697 ERBB4Q15303 1308 aa20.16■□□□□ 0.82
SSH1-204ENST00000546697 YY1P25490 414 aa20.15■□□□□ 0.82
SSH1-204ENST00000546697 NCBP3Q53F19 620 aaKnown RBP20.15■□□□□ 0.82
SSH1-204ENST00000546697 KCNA3P22001 575 aa20.14■□□□□ 0.81
SSH1-204ENST00000546697 CCDC146Q8IYE0 955 aa20.14■□□□□ 0.81
SSH1-204ENST00000546697 TSPYL4Q9UJ04 414 aa20.12■□□□□ 0.81
SSH1-204ENST00000546697 N4BP2Q86UW6 1770 aaPredicted RBP20.12■□□□□ 0.81
SSH1-204ENST00000546697 CCDC184Q52MB2 194 aa20.11■□□□□ 0.81
SSH1-204ENST00000546697 LRP10Q7Z4F1 713 aa20.11■□□□□ 0.81
SSH1-204ENST00000546697 DZIP3Q86Y13 1208 aaKnown RBP20.11■□□□□ 0.81
SSH1-204ENST00000546697 TBC1D2BQ9UPU7 963 aa20.11■□□□□ 0.81
SSH1-204ENST00000546697 DLEC1Q9Y238 1755 aa20.11■□□□□ 0.81
SSH1-204ENST00000546697 CARMIL3Q8ND23 1372 aa20.1■□□□□ 0.81
SSH1-204ENST00000546697 SERPINB2P05120 415 aa20.1■□□□□ 0.81
SSH1-204ENST00000546697 ZNF853P0CG23 659 aa20.1■□□□□ 0.81
SSH1-204ENST00000546697 TBC1D9BQ66K14 1250 aa20.1■□□□□ 0.81
SSH1-204ENST00000546697 RRP7AQ9Y3A4 280 aaKnown RBP20.1■□□□□ 0.81
SSH1-204ENST00000546697 ARFGEF1Q9Y6D6 1849 aa20.1■□□□□ 0.81
SSH1-204ENST00000546697 HOXB7P09629 217 aa20.09■□□□□ 0.81
SSH1-204ENST00000546697 DPEP1P16444 411 aa20.09■□□□□ 0.81
SSH1-204ENST00000546697 CFAP44Q96MT7 982 aa20.09■□□□□ 0.81
SSH1-204ENST00000546697 ERVV-1B6SEH8 477 aa20.08■□□□□ 0.81
SSH1-204ENST00000546697 ANP32CO43423 234 aa20.08■□□□□ 0.81
SSH1-204ENST00000546697 CCDC27Q2M243 656 aa20.08■□□□□ 0.81
SSH1-204ENST00000546697 PDZRN3Q9UPQ7 1066 aa20.08■□□□□ 0.81
SSH1-204ENST00000546697 ADCY9O60503 1353 aa20.08■□□□□ 0.8
SSH1-204ENST00000546697 A0A0G2JLW4 131 aa20.07■□□□□ 0.8
SSH1-204ENST00000546697 APAF1O14727 1248 aa20.07■□□□□ 0.8
SSH1-204ENST00000546697 PDIA6Q15084 440 aa20.07■□□□□ 0.8
SSH1-204ENST00000546697 NPM2Q86SE8 214 aaKnown RBP20.07■□□□□ 0.8
SSH1-204ENST00000546697 ANKRD31Q8N7Z5 1873 aa20.06■□□□□ 0.8
SSH1-204ENST00000546697 ATP10DQ9P241 1426 aa20.06■□□□□ 0.8
SSH1-204ENST00000546697 ZNF652Q9Y2D9 606 aa20.06■□□□□ 0.8
SSH1-204ENST00000546697 PIP4K2AP48426 406 aaPredicted RBP20.05■□□□□ 0.8
SSH1-204ENST00000546697 NEUROD2Q15784 382 aa20.05■□□□□ 0.8
SSH1-204ENST00000546697 BRIP1Q9BX63 1249 aa20.05■□□□□ 0.8
SSH1-204ENST00000546697 PIM2Q9P1W9 311 aa20.05■□□□□ 0.8
SSH1-204ENST00000546697 CALD1Q05682 793 aaKnown RBP20.04■□□□□ 0.8
SSH1-204ENST00000546697 PRR5LQ6MZQ0 368 aa20.04■□□□□ 0.8
SSH1-204ENST00000546697 SETDB2Q96T68 719 aa20.04■□□□□ 0.8
SSH1-204ENST00000546697 IFT57Q9NWB7 429 aa20.04■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 46.4 ms