RNA–Protein interactions for RNA: ENST00000546498.1

PKP2-203, Transcript of plakophilin 2, humanhuman

TSL 2

Gene PKP2, Length 589 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP2-203ENST00000546498 USP16Q9Y5T5 823 aa17.59■□□□□ 0.41
PKP2-203ENST00000546498 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP17.58■□□□□ 0.4
PKP2-203ENST00000546498 PRAMEF22A3QJZ6 481 aa17.58■□□□□ 0.4
PKP2-203ENST00000546498 RPS6KA4O75676 772 aa17.58■□□□□ 0.4
PKP2-203ENST00000546498 ADRA2BP18089 450 aa17.58■□□□□ 0.4
PKP2-203ENST00000546498 TSR2Q969E8 191 aaKnown RBP17.58■□□□□ 0.4
PKP2-203ENST00000546498 TJP1Q07157 1748 aa17.58■□□□□ 0.4
PKP2-203ENST00000546498 CICQ96RK0 1608 aaPredicted RBP17.58■□□□□ 0.4
PKP2-203ENST00000546498 PNPLA7Q6ZV29 1317 aa17.57■□□□□ 0.4
PKP2-203ENST00000546498 ZNF521Q96K83 1311 aa17.57■□□□□ 0.4
PKP2-203ENST00000546498 TAF1LQ8IZX4 1826 aa17.57■□□□□ 0.4
PKP2-203ENST00000546498 E9PSI1 815 aa17.57■□□□□ 0.4
PKP2-203ENST00000546498 HOXB7P09629 217 aa17.57■□□□□ 0.4
PKP2-203ENST00000546498 CANXP27824 592 aaKnown RBP17.57■□□□□ 0.4
PKP2-203ENST00000546498 TRAPPC3LQ5T215 181 aa17.57■□□□□ 0.4
PKP2-203ENST00000546498 INTS5Q6P9B9 1019 aaKnown RBP17.57■□□□□ 0.4
PKP2-203ENST00000546498 CHMP4AQ9BY43 222 aa17.57■□□□□ 0.4
PKP2-203ENST00000546498 ZBTB1Q9Y2K1 713 aa17.57■□□□□ 0.4
PKP2-203ENST00000546498 EIF2S2P20042 333 aaKnown RBP17.56■□□□□ 0.4
PKP2-203ENST00000546498 ZNF330Q9Y3S2 320 aaPredicted RBP17.56■□□□□ 0.4
PKP2-203ENST00000546498 FANCIQ9NVI1 1328 aa17.55■□□□□ 0.4
PKP2-203ENST00000546498 A1BGP04217 495 aa17.55■□□□□ 0.4
PKP2-203ENST00000546498 RFC4P35249 363 aa17.55■□□□□ 0.4
PKP2-203ENST00000546498 DUSP27Q5VZP5 1158 aa17.55■□□□□ 0.4
PKP2-203ENST00000546498 COL5A3P25940 1745 aaPredicted RBP17.55■□□□□ 0.4
PKP2-203ENST00000546498 SOS1Q07889 1333 aaPredicted RBP17.54■□□□□ 0.4
PKP2-203ENST00000546498 A0A087WZG4 1122 aa17.54■□□□□ 0.4
PKP2-203ENST00000546498 IL6STP40189 918 aaPredicted RBP17.54■□□□□ 0.4
PKP2-203ENST00000546498 KRT24Q2M2I5 525 aa17.54■□□□□ 0.4
PKP2-203ENST00000546498 HDGFL1Q5TGJ6 251 aa17.54■□□□□ 0.4
PKP2-203ENST00000546498 COL23A1Q86Y22 540 aaPredicted RBP17.54■□□□□ 0.4
PKP2-203ENST00000546498 SLC16A10Q8TF71 515 aa17.54■□□□□ 0.4
PKP2-203ENST00000546498 ERBB4Q15303 1308 aa17.53■□□□□ 0.4
PKP2-203ENST00000546498 ELL2O00472 640 aaPredicted RBP17.53■□□□□ 0.4
PKP2-203ENST00000546498 ZPR1O75312 459 aa17.52■□□□□ 0.4
PKP2-203ENST00000546498 NECTIN2Q92692 538 aa17.52■□□□□ 0.4
PKP2-203ENST00000546498 ARHGEF1Q92888 912 aaKnown RBP17.52■□□□□ 0.4
PKP2-203ENST00000546498 ARXQ96QS3 562 aa17.52■□□□□ 0.4
PKP2-203ENST00000546498 SPINK5Q9NQ38 1064 aaPredicted RBP17.52■□□□□ 0.4
PKP2-203ENST00000546498 COL15A1P39059 1388 aa17.52■□□□□ 0.39
PKP2-203ENST00000546498 ZBTB7AO95365 584 aa17.51■□□□□ 0.39
PKP2-203ENST00000546498 PIP4K2AP48426 406 aaPredicted RBP17.51■□□□□ 0.39
PKP2-203ENST00000546498 EIF5P55010 431 aaKnown RBP17.51■□□□□ 0.39
PKP2-203ENST00000546498 TWISTNBQ3B726 338 aaPredicted RBP17.51■□□□□ 0.39
PKP2-203ENST00000546498 SMIM5Q71RC9 77 aa17.51■□□□□ 0.39
PKP2-203ENST00000546498 AMIGO3Q86WK7 504 aa17.51■□□□□ 0.39
PKP2-203ENST00000546498 C8orf58Q8NAV2 365 aa17.51■□□□□ 0.39
PKP2-203ENST00000546498 MTFR1LQ9H019 292 aa17.51■□□□□ 0.39
PKP2-203ENST00000546498 MYL6BP14649 208 aa17.5■□□□□ 0.39
PKP2-203ENST00000546498 EXOSC9Q06265 439 aaKnown RBP17.5■□□□□ 0.39
PKP2-203ENST00000546498 SLFN5Q08AF3 891 aa17.5■□□□□ 0.39
PKP2-203ENST00000546498 PDGFDQ9GZP0 370 aaPredicted RBP17.5■□□□□ 0.39
PKP2-203ENST00000546498 QSER1Q2KHR3 1735 aa17.5■□□□□ 0.39
PKP2-203ENST00000546498 ZBED9Q6R2W3 1325 aa17.49■□□□□ 0.39
PKP2-203ENST00000546498 LAMB4A4D0S4 1761 aa17.49■□□□□ 0.39
PKP2-203ENST00000546498 NBPF26B4DH59 902 aa17.49■□□□□ 0.39
PKP2-203ENST00000546498 CCDC30Q5VVM6 783 aa17.49■□□□□ 0.39
PKP2-203ENST00000546498 NBPF10Q6P3W6 841 aaKnown RBP17.49■□□□□ 0.39
PKP2-203ENST00000546498 NBPF15Q8N660 670 aa17.49■□□□□ 0.39
PKP2-203ENST00000546498 SPON1Q9HCB6 807 aa17.49■□□□□ 0.39
PKP2-203ENST00000546498 UBR3Q6ZT12 1888 aa17.49■□□□□ 0.39
PKP2-203ENST00000546498 MYH14Q7Z406 1995 aaKnown RBP17.48■□□□□ 0.39
PKP2-203ENST00000546498 TSPYL6Q8N831 410 aa17.48■□□□□ 0.39
PKP2-203ENST00000546498 CDCA7LQ96GN5 454 aa17.48■□□□□ 0.39
PKP2-203ENST00000546498 DBF4Q9UBU7 674 aaPredicted RBP17.48■□□□□ 0.39
PKP2-203ENST00000546498 USP42Q9H9J4 1324 aaKnown RBP17.47■□□□□ 0.39
PKP2-203ENST00000546498 POLD1P28340 1107 aa17.47■□□□□ 0.39
PKP2-203ENST00000546498 KIF6Q6ZMV9 814 aa17.47■□□□□ 0.39
PKP2-203ENST00000546498 DZIP3Q86Y13 1208 aaKnown RBP17.47■□□□□ 0.39
PKP2-203ENST00000546498 STK31Q9BXU1 1019 aa17.47■□□□□ 0.39
PKP2-203ENST00000546498 DDX21Q9NR30 783 aaKnown RBP eCLIP17.47■□□□□ 0.39
PKP2-203ENST00000546498 CHPF2Q9P2E5 772 aa17.47■□□□□ 0.39
PKP2-203ENST00000546498 NARFQ9UHQ1 456 aa17.47■□□□□ 0.39
PKP2-203ENST00000546498 ATF5Q9Y2D1 282 aaPredicted RBP17.47■□□□□ 0.39
PKP2-203ENST00000546498 TUBGCP6Q96RT7 1819 aa17.47■□□□□ 0.39
PKP2-203ENST00000546498 USPL1Q5W0Q7 1092 aa17.46■□□□□ 0.39
PKP2-203ENST00000546498 MSL1Q68DK7 614 aa17.46■□□□□ 0.39
PKP2-203ENST00000546498 NLGN1Q8N2Q7 840 aa17.46■□□□□ 0.39
PKP2-203ENST00000546498 SRP68Q9UHB9 627 aaKnown RBP17.46■□□□□ 0.39
PKP2-203ENST00000546498 TBC1D2BQ9UPU7 963 aa17.46■□□□□ 0.39
PKP2-203ENST00000546498 HYPKQ9NX55 129 aa17.45■□□□□ 0.38
PKP2-203ENST00000546498 ZNF652Q9Y2D9 606 aa17.45■□□□□ 0.38
PKP2-203ENST00000546498 CASZ1Q86V15 1759 aa17.45■□□□□ 0.38
PKP2-203ENST00000546498 ANXA1P04083 346 aa17.44■□□□□ 0.38
PKP2-203ENST00000546498 GYS1P13807 737 aa17.44■□□□□ 0.38
PKP2-203ENST00000546498 PDIA6Q15084 440 aa17.44■□□□□ 0.38
PKP2-203ENST00000546498 VAMP4O75379 141 aa17.43■□□□□ 0.38
PKP2-203ENST00000546498 AIMP1Q12904 312 aaKnown RBP17.43■□□□□ 0.38
PKP2-203ENST00000546498 PROSER3Q2NL68 480 aa17.43■□□□□ 0.38
PKP2-203ENST00000546498 TRMT2AQ8IZ69 625 aaKnown RBP17.43■□□□□ 0.38
PKP2-203ENST00000546498 PPP1R1BQ9UD71 204 aaPredicted RBP17.43■□□□□ 0.38
PKP2-203ENST00000546498 CAMTA2O94983 1202 aa17.42■□□□□ 0.38
PKP2-203ENST00000546498 FKBP8Q14318 412 aa17.41■□□□□ 0.38
PKP2-203ENST00000546498 COPS6Q7L5N1 327 aa17.41■□□□□ 0.38
PKP2-203ENST00000546498 XAGE3Q8WTP9 111 aa17.41■□□□□ 0.38
PKP2-203ENST00000546498 YTHDC1Q96MU7 727 aaKnown RBP17.41■□□□□ 0.38
PKP2-203ENST00000546498 MAP3K15Q6ZN16 1313 aa17.41■□□□□ 0.38
PKP2-203ENST00000546498 ERVV-1B6SEH8 477 aa17.4■□□□□ 0.38
PKP2-203ENST00000546498 TCERG1O14776 1098 aaKnown RBP17.4■□□□□ 0.38
PKP2-203ENST00000546498 RGL2O15211 777 aa17.4■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms