RNA–Protein interactions for RNA: ENST00000546378.1

HOXC11-202, Transcript of homeobox C11, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXC11, Length 3,261 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC11-202ENST00000546378 SIPA1L2Q9P2F8 1722 aaPredicted RBP17.69■□□□□ 0.42
HOXC11-202ENST00000546378 GOLGA6L4A6NEF3 574 aa17.68■□□□□ 0.42
HOXC11-202ENST00000546378 MX1P20591 662 aa17.68■□□□□ 0.42
HOXC11-202ENST00000546378 ZC3H6P61129 1189 aaKnown RBP17.68■□□□□ 0.42
HOXC11-202ENST00000546378 AIMP1Q12904 312 aaKnown RBP17.68■□□□□ 0.42
HOXC11-202ENST00000546378 LRRCC1Q9C099 1032 aa17.68■□□□□ 0.42
HOXC11-202ENST00000546378 EIF2AK3Q9NZJ5 1116 aaKnown RBP17.68■□□□□ 0.42
HOXC11-202ENST00000546378 PTMSP20962 102 aa17.67■□□□□ 0.42
HOXC11-202ENST00000546378 SYTL4Q96C24 671 aaPredicted RBP17.67■□□□□ 0.42
HOXC11-202ENST00000546378 SETD1AO15047 1707 aaKnown RBP17.67■□□□□ 0.42
HOXC11-202ENST00000546378 PPP1R9BQ96SB3 815 aa17.67■□□□□ 0.42
HOXC11-202ENST00000546378 NOL7Q9UMY1 257 aaKnown RBP17.67■□□□□ 0.42
HOXC11-202ENST00000546378 SMC3Q9UQE7 1217 aa17.67■□□□□ 0.42
HOXC11-202ENST00000546378 CASTP20810 708 aaKnown RBP17.66■□□□□ 0.42
HOXC11-202ENST00000546378 C19orf44Q9H6X5 657 aa17.66■□□□□ 0.42
HOXC11-202ENST00000546378 DNM1Q05193 864 aaKnown RBP17.66■□□□□ 0.42
HOXC11-202ENST00000546378 PPP4R3BQ5MIZ7 849 aa17.66■□□□□ 0.42
HOXC11-202ENST00000546378 CABLES1Q8TDN4 633 aa17.66■□□□□ 0.42
HOXC11-202ENST00000546378 GNAI2P04899 355 aa17.65■□□□□ 0.42
HOXC11-202ENST00000546378 KRT28Q7Z3Y7 464 aa17.65■□□□□ 0.42
HOXC11-202ENST00000546378 PHAXQ9H814 394 aaKnown RBP17.65■□□□□ 0.42
HOXC11-202ENST00000546378 NDUFB9Q9Y6M9 179 aa17.65■□□□□ 0.42
HOXC11-202ENST00000546378 C16orf45Q96MC5 204 aaPredicted RBP17.65■□□□□ 0.42
HOXC11-202ENST00000546378 ISY1Q9ULR0 285 aaKnown RBP17.65■□□□□ 0.42
HOXC11-202ENST00000546378 SRGAP3O43295 1099 aa17.64■□□□□ 0.42
HOXC11-202ENST00000546378 FGD1P98174 961 aa17.64■□□□□ 0.42
HOXC11-202ENST00000546378 LMOD3Q0VAK6 560 aa17.64■□□□□ 0.42
HOXC11-202ENST00000546378 PTCH1Q13635 1447 aa17.64■□□□□ 0.41
HOXC11-202ENST00000546378 TMEM94Q12767 1356 aa17.64■□□□□ 0.41
HOXC11-202ENST00000546378 SYAP1Q96A49 352 aaPredicted RBP17.64■□□□□ 0.41
HOXC11-202ENST00000546378 ESYT1Q9BSJ8 1104 aa17.64■□□□□ 0.41
HOXC11-202ENST00000546378 SRCIN1Q9C0H9 1055 aa17.64■□□□□ 0.41
HOXC11-202ENST00000546378 PRPF40BQ6NWY9 871 aaKnown RBP17.64■□□□□ 0.41
HOXC11-202ENST00000546378 ERCC4Q92889 916 aaPredicted RBP17.64■□□□□ 0.41
HOXC11-202ENST00000546378 ZNF445P59923 1031 aa17.63■□□□□ 0.41
HOXC11-202ENST00000546378 PIK3R4Q99570 1358 aa17.63■□□□□ 0.41
HOXC11-202ENST00000546378 TTC21AQ8NDW8 1320 aa17.63■□□□□ 0.41
HOXC11-202ENST00000546378 UBTFL1P0CB47 393 aaPredicted RBP17.63■□□□□ 0.41
HOXC11-202ENST00000546378 NAA30Q147X3 362 aaPredicted RBP17.63■□□□□ 0.41
HOXC11-202ENST00000546378 DDX11Q96FC9 970 aa17.63■□□□□ 0.41
HOXC11-202ENST00000546378 JAKMIP1Q96N16 626 aaKnown RBP17.63■□□□□ 0.41
HOXC11-202ENST00000546378 STK11IPQ8N1F8 1099 aa17.62■□□□□ 0.41
HOXC11-202ENST00000546378 CWC22Q9HCG8 908 aaKnown RBP17.62■□□□□ 0.41
HOXC11-202ENST00000546378 ADAMTSL3P82987 1691 aa17.62■□□□□ 0.41
HOXC11-202ENST00000546378 RPAP2Q8IXW5 612 aaPredicted RBP17.62■□□□□ 0.41
HOXC11-202ENST00000546378 PA2G4Q9UQ80 394 aaKnown RBP17.62■□□□□ 0.41
HOXC11-202ENST00000546378 ABCC4O15439 1325 aa17.62■□□□□ 0.41
HOXC11-202ENST00000546378 IQSEC2Q5JU85 1478 aa17.62■□□□□ 0.41
HOXC11-202ENST00000546378 ZNF335Q9H4Z2 1342 aaPredicted RBP17.61■□□□□ 0.41
HOXC11-202ENST00000546378 HAP1P54257 671 aaPredicted RBP17.61■□□□□ 0.41
HOXC11-202ENST00000546378 TRERF1Q96PN7 1200 aa17.61■□□□□ 0.41
HOXC11-202ENST00000546378 LRRC2Q9BYS8 371 aa17.61■□□□□ 0.41
HOXC11-202ENST00000546378 DIAPH3Q9NSV4 1193 aa17.61■□□□□ 0.41
HOXC11-202ENST00000546378 PIP4K2AP48426 406 aaPredicted RBP17.61■□□□□ 0.41
HOXC11-202ENST00000546378 NOLC1Q14978 699 aaKnown RBP eCLIP17.61■□□□□ 0.41
HOXC11-202ENST00000546378 MTHFSDQ2M296 383 aaKnown RBP17.61■□□□□ 0.41
HOXC11-202ENST00000546378 IL16Q14005 1332 aa17.61■□□□□ 0.41
HOXC11-202ENST00000546378 DIP2AQ14689 1571 aa17.6■□□□□ 0.41
HOXC11-202ENST00000546378 EYA1Q99502 592 aa17.6■□□□□ 0.41
HOXC11-202ENST00000546378 LARGE1O95461 756 aa17.6■□□□□ 0.41
HOXC11-202ENST00000546378 SASS6Q6UVJ0 657 aa17.6■□□□□ 0.41
HOXC11-202ENST00000546378 RASEFQ8IZ41 740 aa17.6■□□□□ 0.41
HOXC11-202ENST00000546378 CDC42BPGQ6DT37 1551 aa17.6■□□□□ 0.41
HOXC11-202ENST00000546378 MBD3O95983 291 aa17.6■□□□□ 0.41
HOXC11-202ENST00000546378 U2AF2P26368 475 aaKnown RBP eCLIP17.6■□□□□ 0.41
HOXC11-202ENST00000546378 LRRC59Q96AG4 307 aaKnown RBP17.6■□□□□ 0.41
HOXC11-202ENST00000546378 CHMLP26374 656 aa17.59■□□□□ 0.41
HOXC11-202ENST00000546378 AK2P54819 239 aa17.59■□□□□ 0.41
HOXC11-202ENST00000546378 LRMPQ12912 555 aa17.59■□□□□ 0.41
HOXC11-202ENST00000546378 FLIIQ13045 1269 aa17.59■□□□□ 0.41
HOXC11-202ENST00000546378 LUZP1Q86V48 1076 aa17.59■□□□□ 0.41
HOXC11-202ENST00000546378 FMNL2Q96PY5 1086 aa17.59■□□□□ 0.41
HOXC11-202ENST00000546378 CHAF1AQ13111 956 aaPredicted RBP17.59■□□□□ 0.41
HOXC11-202ENST00000546378 PNPLA6Q8IY17 1366 aa17.58■□□□□ 0.41
HOXC11-202ENST00000546378 PPP1R42Q7Z4L9 355 aa17.58■□□□□ 0.41
HOXC11-202ENST00000546378 CCDC8Q9H0W5 538 aaPredicted RBP17.58■□□□□ 0.41
HOXC11-202ENST00000546378 HSP90B1P14625 803 aaKnown RBP17.58■□□□□ 0.4
HOXC11-202ENST00000546378 HDGFL1Q5TGJ6 251 aa17.58■□□□□ 0.4
HOXC11-202ENST00000546378 BICD2Q8TD16 824 aa17.58■□□□□ 0.4
HOXC11-202ENST00000546378 HOXC9P31274 260 aa17.57■□□□□ 0.4
HOXC11-202ENST00000546378 TRIM5Q9C035 493 aa17.57■□□□□ 0.4
HOXC11-202ENST00000546378 TRMT1Q9NXH9 659 aaKnown RBP17.57■□□□□ 0.4
HOXC11-202ENST00000546378 PYCARDQ9ULZ3 195 aa17.57■□□□□ 0.4
HOXC11-202ENST00000546378 RTL1A6NKG5 1358 aa17.57■□□□□ 0.4
HOXC11-202ENST00000546378 PTGS1P23219 599 aa17.57■□□□□ 0.4
HOXC11-202ENST00000546378 GJB2P29033 226 aa17.57■□□□□ 0.4
HOXC11-202ENST00000546378 CSPP1Q1MSJ5 1256 aa17.57■□□□□ 0.4
HOXC11-202ENST00000546378 KLHDC4Q8TBB5 520 aa17.57■□□□□ 0.4
HOXC11-202ENST00000546378 GCP02774 474 aa17.57■□□□□ 0.4
HOXC11-202ENST00000546378 SYT1P21579 422 aa17.57■□□□□ 0.4
HOXC11-202ENST00000546378 GUCY1B3Q02153 619 aa17.57■□□□□ 0.4
HOXC11-202ENST00000546378 COL9A3Q14050 684 aaPredicted RBP17.57■□□□□ 0.4
HOXC11-202ENST00000546378 CHRNA2Q15822 529 aa17.57■□□□□ 0.4
HOXC11-202ENST00000546378 CSB-PGBD3P0DP91 1061 aa17.56■□□□□ 0.4
HOXC11-202ENST00000546378 TAF7Q15545 349 aaPredicted RBP17.56■□□□□ 0.4
HOXC11-202ENST00000546378 FILIP1Q7Z7B0 1213 aa17.56■□□□□ 0.4
HOXC11-202ENST00000546378 ARHGAP45Q92619 1136 aa17.56■□□□□ 0.4
HOXC11-202ENST00000546378 AATKQ6ZMQ8 1374 aa17.56■□□□□ 0.4
HOXC11-202ENST00000546378 EDC3Q96F86 508 aaKnown RBP17.55■□□□□ 0.4
HOXC11-202ENST00000546378 NRBP1Q9UHY1 535 aa17.55■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 12 ms