RNA–Protein interactions for RNA: ENST00000546337.1

SCRIB-208, Transcript of scribbled planar cell polarity protein, humanhuman

TSL 3

Gene SCRIB, Length 516 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCRIB-208ENST00000546337 SGIP1Q9BQI5 828 aa20.52■□□□□ 0.88
SCRIB-208ENST00000546337 RFC4P35249 363 aa20.51■□□□□ 0.87
SCRIB-208ENST00000546337 PTGER2P43116 358 aa20.51■□□□□ 0.87
SCRIB-208ENST00000546337 NLGN1Q8N2Q7 840 aa20.51■□□□□ 0.87
SCRIB-208ENST00000546337 MIS18AQ9NYP9 233 aa20.51■□□□□ 0.87
SCRIB-208ENST00000546337 ATF5Q9Y2D1 282 aaPredicted RBP20.51■□□□□ 0.87
SCRIB-208ENST00000546337 COL5A3P25940 1745 aaPredicted RBP20.5■□□□□ 0.87
SCRIB-208ENST00000546337 GIGYF1O75420 1035 aaPredicted RBP20.5■□□□□ 0.87
SCRIB-208ENST00000546337 IL6STP40189 918 aaPredicted RBP20.5■□□□□ 0.87
SCRIB-208ENST00000546337 GNAI1P63096 354 aa20.5■□□□□ 0.87
SCRIB-208ENST00000546337 FAM9BQ8IZU0 186 aa20.5■□□□□ 0.87
SCRIB-208ENST00000546337 IFT57Q9NWB7 429 aa20.5■□□□□ 0.87
SCRIB-208ENST00000546337 SOS1Q07889 1333 aaPredicted RBP20.5■□□□□ 0.87
SCRIB-208ENST00000546337 PHF14O94880 888 aa20.49■□□□□ 0.87
SCRIB-208ENST00000546337 ZNF853P0CG23 659 aa20.49■□□□□ 0.87
SCRIB-208ENST00000546337 EIF5P55010 431 aaKnown RBP20.49■□□□□ 0.87
SCRIB-208ENST00000546337 USP16Q9Y5T5 823 aa20.49■□□□□ 0.87
SCRIB-208ENST00000546337 UBR3Q6ZT12 1888 aa20.49■□□□□ 0.87
SCRIB-208ENST00000546337 IL16Q14005 1332 aa20.49■□□□□ 0.87
SCRIB-208ENST00000546337 TJP1Q07157 1748 aa20.48■□□□□ 0.87
SCRIB-208ENST00000546337 NPM2Q86SE8 214 aaKnown RBP20.48■□□□□ 0.87
SCRIB-208ENST00000546337 AMIGO3Q86WK7 504 aa20.48■□□□□ 0.87
SCRIB-208ENST00000546337 CHMP4AQ9BY43 222 aa20.48■□□□□ 0.87
SCRIB-208ENST00000546337 PPP1R1BQ9UD71 204 aaPredicted RBP20.48■□□□□ 0.87
SCRIB-208ENST00000546337 WWC1Q8IX03 1113 aa20.47■□□□□ 0.87
SCRIB-208ENST00000546337 ZBTB1Q9Y2K1 713 aa20.47■□□□□ 0.87
SCRIB-208ENST00000546337 ERBB4Q15303 1308 aa20.47■□□□□ 0.87
SCRIB-208ENST00000546337 RGL2O15211 777 aa20.46■□□□□ 0.87
SCRIB-208ENST00000546337 HOXB7P09629 217 aa20.46■□□□□ 0.87
SCRIB-208ENST00000546337 WDR63Q8IWG1 891 aa20.46■□□□□ 0.87
SCRIB-208ENST00000546337 ARXQ96QS3 562 aa20.46■□□□□ 0.87
SCRIB-208ENST00000546337 NARFQ9UHQ1 456 aa20.46■□□□□ 0.87
SCRIB-208ENST00000546337 MYH14Q7Z406 1995 aaKnown RBP20.46■□□□□ 0.87
SCRIB-208ENST00000546337 ZPR1O75312 459 aa20.45■□□□□ 0.86
SCRIB-208ENST00000546337 TUBGCP6Q96RT7 1819 aa20.44■□□□□ 0.86
SCRIB-208ENST00000546337 A1BGP04217 495 aa20.44■□□□□ 0.86
SCRIB-208ENST00000546337 GYS1P13807 737 aa20.44■□□□□ 0.86
SCRIB-208ENST00000546337 CANXP27824 592 aaKnown RBP20.44■□□□□ 0.86
SCRIB-208ENST00000546337 USP42Q9H9J4 1324 aaKnown RBP20.44■□□□□ 0.86
SCRIB-208ENST00000546337 COL24A1Q17RW2 1714 aa20.44■□□□□ 0.86
SCRIB-208ENST00000546337 KDM3BQ7LBC6 1761 aa20.44■□□□□ 0.86
SCRIB-208ENST00000546337 COL15A1P39059 1388 aa20.43■□□□□ 0.86
SCRIB-208ENST00000546337 LAS1LQ9Y4W2 734 aaKnown RBP20.42■□□□□ 0.86
SCRIB-208ENST00000546337 SMIM5Q71RC9 77 aa20.41■□□□□ 0.86
SCRIB-208ENST00000546337 PRAMEF22A3QJZ6 481 aa20.4■□□□□ 0.86
SCRIB-208ENST00000546337 MBIPQ9NS73 344 aa20.4■□□□□ 0.86
SCRIB-208ENST00000546337 SRCAPQ6ZRS2 3230 aa20.39■□□□□ 0.85
SCRIB-208ENST00000546337 CLEC4GQ6UXB4 293 aa20.39■□□□□ 0.85
SCRIB-208ENST00000546337 NBPF26B4DH59 902 aa20.38■□□□□ 0.85
SCRIB-208ENST00000546337 TM4SF1P30408 202 aa20.38■□□□□ 0.85
SCRIB-208ENST00000546337 NBPF10Q6P3W6 841 aaKnown RBP20.38■□□□□ 0.85
SCRIB-208ENST00000546337 MIER1Q8N108 512 aa20.38■□□□□ 0.85
SCRIB-208ENST00000546337 NBPF15Q8N660 670 aa20.38■□□□□ 0.85
SCRIB-208ENST00000546337 CD2APQ9Y5K6 639 aa20.38■□□□□ 0.85
SCRIB-208ENST00000546337 USPL1Q5W0Q7 1092 aa20.37■□□□□ 0.85
SCRIB-208ENST00000546337 MSL1Q68DK7 614 aa20.37■□□□□ 0.85
SCRIB-208ENST00000546337 MMP10P09238 476 aa20.36■□□□□ 0.85
SCRIB-208ENST00000546337 DZIP3Q86Y13 1208 aaKnown RBP20.36■□□□□ 0.85
SCRIB-208ENST00000546337 SYT17Q9BSW7 474 aa20.36■□□□□ 0.85
SCRIB-208ENST00000546337 SRP68Q9UHB9 627 aaKnown RBP20.36■□□□□ 0.85
SCRIB-208ENST00000546337 PARP3Q9Y6F1 533 aa20.36■□□□□ 0.85
SCRIB-208ENST00000546337 ERVV-1B6SEH8 477 aa20.35■□□□□ 0.85
SCRIB-208ENST00000546337 ZNF652Q9Y2D9 606 aa20.35■□□□□ 0.85
SCRIB-208ENST00000546337 CAMTA2O94983 1202 aa20.34■□□□□ 0.85
SCRIB-208ENST00000546337 FKBP8Q14318 412 aa20.34■□□□□ 0.85
SCRIB-208ENST00000546337 DUSP27Q5VZP5 1158 aa20.34■□□□□ 0.85
SCRIB-208ENST00000546337 FHDC1Q9C0D6 1143 aaPredicted RBP20.34■□□□□ 0.85
SCRIB-208ENST00000546337 MYH16Q9H6N6 1097 aa20.34■□□□□ 0.85
SCRIB-208ENST00000546337 BCL2L12Q9HB09 334 aa20.34■□□□□ 0.85
SCRIB-208ENST00000546337 DDX21Q9NR30 783 aaKnown RBP eCLIP20.34■□□□□ 0.85
SCRIB-208ENST00000546337 TBC1D2BQ9UPU7 963 aa20.34■□□□□ 0.85
SCRIB-208ENST00000546337 EIF2S2P20042 333 aaKnown RBP20.33■□□□□ 0.85
SCRIB-208ENST00000546337 PDIA6Q15084 440 aa20.33■□□□□ 0.85
SCRIB-208ENST00000546337 DBF4Q9UBU7 674 aaPredicted RBP20.33■□□□□ 0.85
SCRIB-208ENST00000546337 ZNF330Q9Y3S2 320 aaPredicted RBP20.33■□□□□ 0.85
SCRIB-208ENST00000546337 ZNF521Q96K83 1311 aa20.32■□□□□ 0.84
SCRIB-208ENST00000546337 HDGFL1Q5TGJ6 251 aa20.32■□□□□ 0.84
SCRIB-208ENST00000546337 GOLGA2Q08379 1002 aa20.31■□□□□ 0.84
SCRIB-208ENST00000546337 LAMB4A4D0S4 1761 aa20.31■□□□□ 0.84
SCRIB-208ENST00000546337 DCAF8L1A6NGE4 600 aa20.3■□□□□ 0.84
SCRIB-208ENST00000546337 NFIXQ14938 502 aa20.3■□□□□ 0.84
SCRIB-208ENST00000546337 LRP10Q7Z4F1 713 aa20.3■□□□□ 0.84
SCRIB-208ENST00000546337 HYPKQ9NX55 129 aa20.3■□□□□ 0.84
SCRIB-208ENST00000546337 SALL2Q9Y467 1007 aaPredicted RBP20.3■□□□□ 0.84
SCRIB-208ENST00000546337 POLRMTO00411 1230 aaKnown RBP20.29■□□□□ 0.84
SCRIB-208ENST00000546337 TGFB2P61812 414 aa20.29■□□□□ 0.84
SCRIB-208ENST00000546337 KRT24Q2M2I5 525 aa20.29■□□□□ 0.84
SCRIB-208ENST00000546337 CCDC30Q5VVM6 783 aa20.29■□□□□ 0.84
SCRIB-208ENST00000546337 KIF6Q6ZMV9 814 aa20.29■□□□□ 0.84
SCRIB-208ENST00000546337 C4AP0C0L4 1744 aa20.29■□□□□ 0.84
SCRIB-208ENST00000546337 MAP3K15Q6ZN16 1313 aa20.28■□□□□ 0.84
SCRIB-208ENST00000546337 MYL6BP14649 208 aa20.28■□□□□ 0.84
SCRIB-208ENST00000546337 PIP4K2AP48426 406 aaPredicted RBP20.28■□□□□ 0.84
SCRIB-208ENST00000546337 C8orf58Q8NAV2 365 aa20.28■□□□□ 0.84
SCRIB-208ENST00000546337 SETDB2Q96T68 719 aa20.28■□□□□ 0.84
SCRIB-208ENST00000546337 E9PSI1 815 aa20.27■□□□□ 0.84
SCRIB-208ENST00000546337 SERPINB2P05120 415 aa20.27■□□□□ 0.84
SCRIB-208ENST00000546337 DDR1Q08345 913 aa20.27■□□□□ 0.84
SCRIB-208ENST00000546337 GIGYF2Q6Y7W6 1299 aaKnown RBP20.26■□□□□ 0.83
SCRIB-208ENST00000546337 TSR2Q969E8 191 aaKnown RBP20.26■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 12 ms