RNA–Protein interactions for RNA: ENST00000546279.5

LMO3-233, Transcript of LIM domain only 3, humanhuman

TSL 4

Gene LMO3, Length 590 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMO3-233ENST00000546279 THUMPD2Q9BTF0 503 aaKnown RBP14.05□□□□□ -0.16
LMO3-233ENST00000546279 CD2APQ9Y5K6 639 aa14.05□□□□□ -0.16
LMO3-233ENST00000546279 DSG3P32926 999 aa14.04□□□□□ -0.16
LMO3-233ENST00000546279 NFATC2IPQ8NCF5 419 aa14.04□□□□□ -0.16
LMO3-233ENST00000546279 SLC4A9Q96Q91 983 aa14.03□□□□□ -0.16
LMO3-233ENST00000546279 ATG3Q9NT62 314 aa14.03□□□□□ -0.16
LMO3-233ENST00000546279 LAMB4A4D0S4 1761 aa14.03□□□□□ -0.16
LMO3-233ENST00000546279 ADCY9O60503 1353 aa14.02□□□□□ -0.17
LMO3-233ENST00000546279 HEG1Q9ULI3 1381 aa14.02□□□□□ -0.17
LMO3-233ENST00000546279 ZNF853P0CG23 659 aa14.02□□□□□ -0.17
LMO3-233ENST00000546279 ZNF526Q8TF50 670 aaPredicted RBP14.02□□□□□ -0.17
LMO3-233ENST00000546279 ASAP1Q9ULH1 1129 aa14.02□□□□□ -0.17
LMO3-233ENST00000546279 NEUROD2Q15784 382 aa14.01□□□□□ -0.17
LMO3-233ENST00000546279 WWC1Q8IX03 1113 aa14.01□□□□□ -0.17
LMO3-233ENST00000546279 FLAD1Q8NFF5 587 aa14.01□□□□□ -0.17
LMO3-233ENST00000546279 TMOD3Q9NYL9 352 aa14.01□□□□□ -0.17
LMO3-233ENST00000546279 UBR3Q6ZT12 1888 aa14.01□□□□□ -0.17
LMO3-233ENST00000546279 PALLDQ8WX93 1383 aa14□□□□□ -0.17
LMO3-233ENST00000546279 KCNQ3O43525 872 aa14□□□□□ -0.17
LMO3-233ENST00000546279 CABP4P57796 275 aa14□□□□□ -0.17
LMO3-233ENST00000546279 MKRN4PQ13434 485 aaPredicted RBP14□□□□□ -0.17
LMO3-233ENST00000546279 SYTL4Q96C24 671 aaPredicted RBP14□□□□□ -0.17
LMO3-233ENST00000546279 NEFMP07197 916 aa13.99□□□□□ -0.17
LMO3-233ENST00000546279 SLC39A6Q13433 755 aa13.99□□□□□ -0.17
LMO3-233ENST00000546279 COL23A1Q86Y22 540 aaPredicted RBP13.99□□□□□ -0.17
LMO3-233ENST00000546279 CCNL1Q9UK58 526 aaPredicted RBP13.99□□□□□ -0.17
LMO3-233ENST00000546279 C4BP0C0L5 1744 aa13.98□□□□□ -0.17
LMO3-233ENST00000546279 CHL1O00533 1208 aa13.98□□□□□ -0.17
LMO3-233ENST00000546279 LMOD3Q0VAK6 560 aa13.98□□□□□ -0.17
LMO3-233ENST00000546279 TAF7Q15545 349 aaPredicted RBP13.98□□□□□ -0.17
LMO3-233ENST00000546279 NGEFQ8N5V2 710 aa13.98□□□□□ -0.17
LMO3-233ENST00000546279 RTF1Q92541 710 aaKnown RBP13.98□□□□□ -0.17
LMO3-233ENST00000546279 KIF3CO14782 793 aa13.97□□□□□ -0.17
LMO3-233ENST00000546279 KCNQ4P56696 695 aa13.97□□□□□ -0.17
LMO3-233ENST00000546279 TEFQ10587 303 aa13.97□□□□□ -0.17
LMO3-233ENST00000546279 ZNF790Q6PG37 636 aa13.97□□□□□ -0.17
LMO3-233ENST00000546279 IL16Q14005 1332 aa13.96□□□□□ -0.17
LMO3-233ENST00000546279 ITPK1Q13572 414 aa13.96□□□□□ -0.17
LMO3-233ENST00000546279 MSL1Q68DK7 614 aa13.96□□□□□ -0.17
LMO3-233ENST00000546279 DNAJC5GQ8N7S2 189 aa13.96□□□□□ -0.17
LMO3-233ENST00000546279 BABAM1Q9NWV8 329 aa13.96□□□□□ -0.17
LMO3-233ENST00000546279 MIS18AQ9NYP9 233 aa13.96□□□□□ -0.17
LMO3-233ENST00000546279 TOMM70O94826 608 aa13.95□□□□□ -0.18
LMO3-233ENST00000546279 ZNF496Q96IT1 587 aaPredicted RBP13.95□□□□□ -0.18
LMO3-233ENST00000546279 CFAP44Q96MT7 982 aa13.95□□□□□ -0.18
LMO3-233ENST00000546279 BTBD11A6QL63 1104 aa13.94□□□□□ -0.18
LMO3-233ENST00000546279 C4AP0C0L4 1744 aa13.94□□□□□ -0.18
LMO3-233ENST00000546279 EIF4A1P60842 406 aaKnown RBP13.94□□□□□ -0.18
LMO3-233ENST00000546279 WDR63Q8IWG1 891 aa13.94□□□□□ -0.18
LMO3-233ENST00000546279 TRMT2AQ8IZ69 625 aaKnown RBP13.94□□□□□ -0.18
LMO3-233ENST00000546279 SMARCC1Q92922 1105 aaPredicted RBP13.94□□□□□ -0.18
LMO3-233ENST00000546279 IFT57Q9NWB7 429 aa13.94□□□□□ -0.18
LMO3-233ENST00000546279 LOC102724428A0A0B4J2F2 783 aa13.93□□□□□ -0.18
LMO3-233ENST00000546279 SIK1P57059 783 aa13.93□□□□□ -0.18
LMO3-233ENST00000546279 MBIPQ9NS73 344 aa13.93□□□□□ -0.18
LMO3-233ENST00000546279 SALL2Q9Y467 1007 aaPredicted RBP13.93□□□□□ -0.18
LMO3-233ENST00000546279 CACNA1FO60840 1977 aa13.92□□□□□ -0.18
LMO3-233ENST00000546279 PRAMEF22A3QJZ6 481 aa13.92□□□□□ -0.18
LMO3-233ENST00000546279 PTCD1O75127 700 aaKnown RBP13.91□□□□□ -0.18
LMO3-233ENST00000546279 KRT24Q2M2I5 525 aa13.91□□□□□ -0.18
LMO3-233ENST00000546279 AMIGO3Q86WK7 504 aa13.91□□□□□ -0.18
LMO3-233ENST00000546279 VSIG10Q8N0Z9 540 aa13.91□□□□□ -0.18
LMO3-233ENST00000546279 LINC00116Q8NCU8 138 aa13.91□□□□□ -0.18
LMO3-233ENST00000546279 GNAI1P63096 354 aa13.9□□□□□ -0.18
LMO3-233ENST00000546279 CDCA7LQ96GN5 454 aa13.9□□□□□ -0.18
LMO3-233ENST00000546279 ZBED9Q6R2W3 1325 aa13.9□□□□□ -0.19
LMO3-233ENST00000546279 FANCIQ9NVI1 1328 aa13.9□□□□□ -0.19
LMO3-233ENST00000546279 HNRNPUQ00839 825 aaKnown RBP eCLIP13.89□□□□□ -0.19
LMO3-233ENST00000546279 SLFN5Q08AF3 891 aa13.89□□□□□ -0.19
LMO3-233ENST00000546279 DNAJC10Q8IXB1 793 aa13.89□□□□□ -0.19
LMO3-233ENST00000546279 TSR2Q969E8 191 aaKnown RBP13.89□□□□□ -0.19
LMO3-233ENST00000546279 TSPYL4Q9UJ04 414 aa13.89□□□□□ -0.19
LMO3-233ENST00000546279 BCORQ6W2J9 1755 aa13.88□□□□□ -0.19
LMO3-233ENST00000546279 CYP19A1P11511 503 aaPredicted RBP13.88□□□□□ -0.19
LMO3-233ENST00000546279 PRELPP51888 382 aa13.88□□□□□ -0.19
LMO3-233ENST00000546279 CALD1Q05682 793 aaKnown RBP13.88□□□□□ -0.19
LMO3-233ENST00000546279 COL13A1Q5TAT6 717 aaPredicted RBP13.88□□□□□ -0.19
LMO3-233ENST00000546279 TNS4Q8IZW8 715 aa13.88□□□□□ -0.19
LMO3-233ENST00000546279 JMYQ8N9B5 988 aa13.88□□□□□ -0.19
LMO3-233ENST00000546279 KLRG1Q96E93 195 aa13.88□□□□□ -0.19
LMO3-233ENST00000546279 FMNL2Q96PY5 1086 aa13.88□□□□□ -0.19
LMO3-233ENST00000546279 RBM42Q9BTD8 480 aaKnown RBP13.88□□□□□ -0.19
LMO3-233ENST00000546279 ATP6V1AP38606 617 aa13.87□□□□□ -0.19
LMO3-233ENST00000546279 INTS5Q6P9B9 1019 aaKnown RBP13.87□□□□□ -0.19
LMO3-233ENST00000546279 LRP10Q7Z4F1 713 aa13.87□□□□□ -0.19
LMO3-233ENST00000546279 C16orf71Q8IYS4 520 aaPredicted RBP13.87□□□□□ -0.19
LMO3-233ENST00000546279 TTC5Q8N0Z6 440 aa13.87□□□□□ -0.19
LMO3-233ENST00000546279 C8orf58Q8NAV2 365 aa13.87□□□□□ -0.19
LMO3-233ENST00000546279 RBM46Q8TBY0 533 aaKnown RBP13.87□□□□□ -0.19
LMO3-233ENST00000546279 AK7Q96M32 723 aa13.87□□□□□ -0.19
LMO3-233ENST00000546279 USP16Q9Y5T5 823 aa13.87□□□□□ -0.19
LMO3-233ENST00000546279 CNTNAP4Q9C0A0 1308 aa13.87□□□□□ -0.19
LMO3-233ENST00000546279 SCN7AQ01118 1682 aa13.86□□□□□ -0.19
LMO3-233ENST00000546279 GOLGA2Q08379 1002 aa13.86□□□□□ -0.19
LMO3-233ENST00000546279 RC3H1Q5TC82 1133 aaKnown RBP13.86□□□□□ -0.19
LMO3-233ENST00000546279 DUSP27Q5VZP5 1158 aa13.86□□□□□ -0.19
LMO3-233ENST00000546279 TSPYL6Q8N831 410 aa13.86□□□□□ -0.19
LMO3-233ENST00000546279 ZBTB12Q9Y330 459 aaPredicted RBP13.86□□□□□ -0.19
LMO3-233ENST00000546279 NBPF26B4DH59 902 aa13.85□□□□□ -0.19
LMO3-233ENST00000546279 SNRPA1P09661 255 aaKnown RBP13.85□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms