RNA–Protein interactions for RNA: ENST00000545920.1

SNHG1-225, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 2

Gene SNHG1, Length 625 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-225ENST00000545920 SSH1Q8WYL5 1049 aa8.05□□□□□ -1.12
SNHG1-225ENST00000545920 ARID3AQ99856 593 aa8.05□□□□□ -1.12
SNHG1-225ENST00000545920 ADAM33Q9BZ11 813 aa8.05□□□□□ -1.12
SNHG1-225ENST00000545920 IFT57Q9NWB7 429 aa8.05□□□□□ -1.12
SNHG1-225ENST00000545920 ADGRG1Q9Y653 693 aa8.05□□□□□ -1.12
SNHG1-225ENST00000545920 AATKQ6ZMQ8 1374 aa8.05□□□□□ -1.12
SNHG1-225ENST00000545920 PTPRMP28827 1452 aa8.05□□□□□ -1.12
SNHG1-225ENST00000545920 YTHDC2Q9H6S0 1430 aaKnown RBP8.04□□□□□ -1.12
SNHG1-225ENST00000545920 YEATS2Q9ULM3 1422 aa8.04□□□□□ -1.12
SNHG1-225ENST00000545920 GOLGA6L22H0YM25 854 aa8.04□□□□□ -1.12
SNHG1-225ENST00000545920 ITGBL1O95965 494 aaPredicted RBP8.04□□□□□ -1.12
SNHG1-225ENST00000545920 CHD1LQ86WJ1 897 aa8.04□□□□□ -1.12
SNHG1-225ENST00000545920 FNBP4Q8N3X1 1017 aaPredicted RBP8.04□□□□□ -1.12
SNHG1-225ENST00000545920 PROCA1Q8NCQ7 364 aaPredicted RBP8.04□□□□□ -1.12
SNHG1-225ENST00000545920 NLRP7Q8WX94 980 aa8.04□□□□□ -1.12
SNHG1-225ENST00000545920 SIRT1Q96EB6 747 aa8.04□□□□□ -1.12
SNHG1-225ENST00000545920 API5Q9BZZ5 524 aaKnown RBP8.04□□□□□ -1.12
SNHG1-225ENST00000545920 SLKQ9H2G2 1235 aaPredicted RBP8.04□□□□□ -1.12
SNHG1-225ENST00000545920 POGKQ9P215 609 aa8.04□□□□□ -1.12
SNHG1-225ENST00000545920 RRP7AQ9Y3A4 280 aaKnown RBP8.04□□□□□ -1.12
SNHG1-225ENST00000545920 FAM135BQ49AJ0 1406 aa8.03□□□□□ -1.12
SNHG1-225ENST00000545920 ARHGEF40Q8TER5 1519 aa8.03□□□□□ -1.12
SNHG1-225ENST00000545920 FYB1O15117 783 aa8.03□□□□□ -1.12
SNHG1-225ENST00000545920 RIPK4P57078 832 aa8.03□□□□□ -1.12
SNHG1-225ENST00000545920 NFE2L2Q16236 605 aa8.03□□□□□ -1.12
SNHG1-225ENST00000545920 C6orf132Q5T0Z8 1188 aa8.03□□□□□ -1.12
SNHG1-225ENST00000545920 NOB1Q9ULX3 412 aaKnown RBP8.03□□□□□ -1.12
SNHG1-225ENST00000545920 CPSF1Q10570 1443 aaKnown RBP8.03□□□□□ -1.12
SNHG1-225ENST00000545920 DIP2CQ9Y2E4 1556 aa8.02□□□□□ -1.13
SNHG1-225ENST00000545920 CD163L1Q9NR16 1453 aa8.02□□□□□ -1.13
SNHG1-225ENST00000545920 U2SURPO15042 1029 aaKnown RBP8.02□□□□□ -1.13
SNHG1-225ENST00000545920 SRPK2P78362 688 aaKnown RBP8.02□□□□□ -1.13
SNHG1-225ENST00000545920 MYSM1Q5VVJ2 828 aa8.02□□□□□ -1.13
SNHG1-225ENST00000545920 TMEM132EQ6IEE7 984 aa8.02□□□□□ -1.13
SNHG1-225ENST00000545920 GGT6Q6P531 493 aa8.02□□□□□ -1.13
SNHG1-225ENST00000545920 TMEM57Q8N5G2 664 aa8.02□□□□□ -1.13
SNHG1-225ENST00000545920 RABGEF1Q9UJ41 708 aa8.02□□□□□ -1.13
SNHG1-225ENST00000545920 ABCC4O15439 1325 aa8.02□□□□□ -1.13
SNHG1-225ENST00000545920 CDK12Q9NYV4 1490 aaPredicted RBP8.01□□□□□ -1.13
SNHG1-225ENST00000545920 PPP1R3GB7ZBB8 358 aa8.01□□□□□ -1.13
SNHG1-225ENST00000545920 ZNF853P0CG23 659 aa8.01□□□□□ -1.13
SNHG1-225ENST00000545920 TNNT2P45379 298 aaPredicted RBP8.01□□□□□ -1.13
SNHG1-225ENST00000545920 MFAP1P55081 439 aaKnown RBP8.01□□□□□ -1.13
SNHG1-225ENST00000545920 RAB3GAP1Q15042 981 aa8.01□□□□□ -1.13
SNHG1-225ENST00000545920 PADI6Q6TGC4 694 aa8.01□□□□□ -1.13
SNHG1-225ENST00000545920 PROSER2Q86WR7 435 aaPredicted RBP8.01□□□□□ -1.13
SNHG1-225ENST00000545920 CCDC82Q8N4S0 544 aa8.01□□□□□ -1.13
SNHG1-225ENST00000545920 BANK1Q8NDB2 785 aa8.01□□□□□ -1.13
SNHG1-225ENST00000545920 ANKK1Q8NFD2 765 aa8.01□□□□□ -1.13
SNHG1-225ENST00000545920 CWC22Q9HCG8 908 aaKnown RBP8.01□□□□□ -1.13
SNHG1-225ENST00000545920 EDC4Q6P2E9 1401 aaKnown RBP8.01□□□□□ -1.13
SNHG1-225ENST00000545920 TMEM131LA2VDJ0 1609 aa8□□□□□ -1.13
SNHG1-225ENST00000545920 AGLP35573 1532 aa8□□□□□ -1.13
SNHG1-225ENST00000545920 SPDYE5A6NIY4 337 aa8□□□□□ -1.13
SNHG1-225ENST00000545920 K7ELQ4 463 aaPredicted RBP8□□□□□ -1.13
SNHG1-225ENST00000545920 ZBTB7BO15156 539 aaPredicted RBP8□□□□□ -1.13
SNHG1-225ENST00000545920 CDC45O75419 566 aa8□□□□□ -1.13
SNHG1-225ENST00000545920 HSP90AB1P08238 724 aaKnown RBP8□□□□□ -1.13
SNHG1-225ENST00000545920 XRCC6P12956 609 aaKnown RBP eCLIP8□□□□□ -1.13
SNHG1-225ENST00000545920 NUCB2P80303 420 aa8□□□□□ -1.13
SNHG1-225ENST00000545920 IDI1Q13907 227 aa8□□□□□ -1.13
SNHG1-225ENST00000545920 RABEP1Q15276 862 aa8□□□□□ -1.13
SNHG1-225ENST00000545920 DIXDC1Q155Q3 683 aa8□□□□□ -1.13
SNHG1-225ENST00000545920 HS1BP3Q53T59 392 aa8□□□□□ -1.13
SNHG1-225ENST00000545920 BCL2L13Q9BXK5 485 aa8□□□□□ -1.13
SNHG1-225ENST00000545920 GLIPR1L2Q4G1C9 344 aa7.99□□□□□ -1.13
SNHG1-225ENST00000545920 CASC1Q6TDU7 716 aa7.99□□□□□ -1.13
SNHG1-225ENST00000545920 NYAP1Q6ZVC0 841 aa7.99□□□□□ -1.13
SNHG1-225ENST00000545920 ABCF1Q8NE71 845 aaKnown RBP eCLIP7.99□□□□□ -1.13
SNHG1-225ENST00000545920 ANP32BQ92688 251 aaKnown RBP7.99□□□□□ -1.13
SNHG1-225ENST00000545920 TSR2Q969E8 191 aaKnown RBP7.99□□□□□ -1.13
SNHG1-225ENST00000545920 GRPEL1Q9HAV7 217 aa7.99□□□□□ -1.13
SNHG1-225ENST00000545920 POLR3EQ9NVU0 708 aa7.99□□□□□ -1.13
SNHG1-225ENST00000545920 EPB41L2O43491 1005 aaKnown RBP7.98□□□□□ -1.13
SNHG1-225ENST00000545920 VAMP4O75379 141 aa7.98□□□□□ -1.13
SNHG1-225ENST00000545920 CLK2P49760 499 aaKnown RBP7.98□□□□□ -1.13
SNHG1-225ENST00000545920 HDGFP51858 240 aaKnown RBP7.98□□□□□ -1.13
SNHG1-225ENST00000545920 TERF1P54274 439 aa7.98□□□□□ -1.13
SNHG1-225ENST00000545920 CCDC173Q0VFZ6 552 aa7.98□□□□□ -1.13
SNHG1-225ENST00000545920 TUSC1Q2TAM9 212 aa7.98□□□□□ -1.13
SNHG1-225ENST00000545920 PPP2R2DQ66LE6 453 aa7.98□□□□□ -1.13
SNHG1-225ENST00000545920 LAPTM4BQ86VI4 370 aa7.98□□□□□ -1.13
SNHG1-225ENST00000545920 RPAP2Q8IXW5 612 aaPredicted RBP7.98□□□□□ -1.13
SNHG1-225ENST00000545920 GGNBP2Q9H3C7 697 aa7.98□□□□□ -1.13
SNHG1-225ENST00000545920 TNNQ9UQP3 1299 aa7.98□□□□□ -1.13
SNHG1-225ENST00000545920 ALKQ9UM73 1620 aa7.98□□□□□ -1.13
SNHG1-225ENST00000545920 SOS1Q07889 1333 aaPredicted RBP7.98□□□□□ -1.13
SNHG1-225ENST00000545920 LRRC7Q96NW7 1537 aa7.98□□□□□ -1.13
SNHG1-225ENST00000545920 SIGLEC1Q9BZZ2 1709 aa7.98□□□□□ -1.13
SNHG1-225ENST00000545920 KIAA0232Q92628 1395 aa7.97□□□□□ -1.13
SNHG1-225ENST00000545920 KIF20BQ96Q89 1820 aa7.97□□□□□ -1.13
SNHG1-225ENST00000545920 PRSS12P56730 875 aa7.97□□□□□ -1.13
SNHG1-225ENST00000545920 KLHL40Q2TBA0 621 aa7.97□□□□□ -1.13
SNHG1-225ENST00000545920 INTS3Q68E01 1043 aaKnown RBP7.97□□□□□ -1.13
SNHG1-225ENST00000545920 UBE2Q2Q8WVN8 375 aa7.97□□□□□ -1.13
SNHG1-225ENST00000545920 POM121Q96HA1 1249 aa7.97□□□□□ -1.13
SNHG1-225ENST00000545920 PRAM1Q96QH2 718 aa7.97□□□□□ -1.13
SNHG1-225ENST00000545920 CDK19Q9BWU1 502 aa7.97□□□□□ -1.13
SNHG1-225ENST00000545920 POLKQ9UBT6 870 aa7.97□□□□□ -1.13
SNHG1-225ENST00000545920 PREX1Q8TCU6 1659 aa7.97□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 10.5 ms