RNA–Protein interactions for RNA: ENST00000545658.1

LRP6-207, Transcript of LDL receptor related protein 6, humanhuman

TSL 3

Gene LRP6, Length 435 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRP6-207ENST00000545658 CDC14CA4D256 554 aa6.67□□□□□ -1.34
LRP6-207ENST00000545658 SCTRP47872 440 aa6.67□□□□□ -1.34
LRP6-207ENST00000545658 CC2D2BQ6DHV5 1058 aa6.67□□□□□ -1.34
LRP6-207ENST00000545658 PRICKLE2Q7Z3G6 844 aa6.67□□□□□ -1.34
LRP6-207ENST00000545658 VWA5B2Q8N398 1253 aa6.67□□□□□ -1.34
LRP6-207ENST00000545658 ZNF592Q92610 1267 aa6.67□□□□□ -1.34
LRP6-207ENST00000545658 ESF1Q9H501 851 aaKnown RBP6.67□□□□□ -1.34
LRP6-207ENST00000545658 PLCH2O75038 1416 aa6.67□□□□□ -1.34
LRP6-207ENST00000545658 NPATQ14207 1427 aa6.67□□□□□ -1.34
LRP6-207ENST00000545658 TCOF1Q13428 1488 aaKnown RBP6.66□□□□□ -1.34
LRP6-207ENST00000545658 RHOQP17081 205 aa6.66□□□□□ -1.34
LRP6-207ENST00000545658 ITGA6P23229 1130 aa6.66□□□□□ -1.34
LRP6-207ENST00000545658 ERVK-9P63128 1117 aa6.66□□□□□ -1.34
LRP6-207ENST00000545658 LYSMD3Q7Z3D4 306 aa6.66□□□□□ -1.34
LRP6-207ENST00000545658 CCDC125Q86Z20 511 aa6.66□□□□□ -1.34
LRP6-207ENST00000545658 CNTNAP3BQ96NU0 1288 aa6.66□□□□□ -1.34
LRP6-207ENST00000545658 CNTNAP3Q9BZ76 1288 aa6.66□□□□□ -1.34
LRP6-207ENST00000545658 CNTLNQ9NXG0 1405 aa6.66□□□□□ -1.34
LRP6-207ENST00000545658 ZNF518AQ6AHZ1 1483 aa6.66□□□□□ -1.34
LRP6-207ENST00000545658 AGLP35573 1532 aa6.66□□□□□ -1.34
LRP6-207ENST00000545658 REREQ9P2R6 1566 aa6.65□□□□□ -1.34
LRP6-207ENST00000545658 SENP3-EIF4A1A0A087X0R7 540 aa6.65□□□□□ -1.34
LRP6-207ENST00000545658 A0A1W2PRU2 124 aa6.65□□□□□ -1.34
LRP6-207ENST00000545658 KRT76Q01546 638 aa6.65□□□□□ -1.34
LRP6-207ENST00000545658 NANOS1Q8WY41 292 aaKnown RBP6.65□□□□□ -1.34
LRP6-207ENST00000545658 COL25A1Q9BXS0 654 aaPredicted RBP6.65□□□□□ -1.34
LRP6-207ENST00000545658 PRM3Q9NNZ6 103 aa6.65□□□□□ -1.34
LRP6-207ENST00000545658 PTPRKQ15262 1439 aa6.65□□□□□ -1.35
LRP6-207ENST00000545658 CPS1P31327 1500 aa6.65□□□□□ -1.35
LRP6-207ENST00000545658 KDM5CP41229 1560 aa6.65□□□□□ -1.35
LRP6-207ENST00000545658 DIP2CQ9Y2E4 1556 aa6.65□□□□□ -1.35
LRP6-207ENST00000545658 RNF144AP50876 292 aaPredicted RBP6.64□□□□□ -1.35
LRP6-207ENST00000545658 EFCAB2Q5VUJ9 269 aa6.64□□□□□ -1.35
LRP6-207ENST00000545658 SV2AQ7L0J3 742 aa6.64□□□□□ -1.35
LRP6-207ENST00000545658 AFAP1Q8N556 730 aa6.64□□□□□ -1.35
LRP6-207ENST00000545658 NLRP3Q96P20 1036 aa6.64□□□□□ -1.35
LRP6-207ENST00000545658 CEP126Q9P2H0 1117 aa6.64□□□□□ -1.35
LRP6-207ENST00000545658 PRXQ9BXM0 1461 aa6.64□□□□□ -1.35
LRP6-207ENST00000545658 SAMD9Q5K651 1589 aa6.64□□□□□ -1.35
LRP6-207ENST00000545658 ALKQ9UM73 1620 aa6.64□□□□□ -1.35
LRP6-207ENST00000545658 POTEAQ6S8J7 498 aa6.63□□□□□ -1.35
LRP6-207ENST00000545658 CYP2U1Q7Z449 544 aa6.63□□□□□ -1.35
LRP6-207ENST00000545658 SHANK2Q9UPX8 1470 aa6.62□□□□□ -1.35
LRP6-207ENST00000545658 ZMYM3Q14202 1370 aa6.62□□□□□ -1.35
LRP6-207ENST00000545658 ABL2P42684 1182 aa6.62□□□□□ -1.35
LRP6-207ENST00000545658 IRF5Q13568 498 aa6.62□□□□□ -1.35
LRP6-207ENST00000545658 SLC27A3Q5K4L6 730 aa6.62□□□□□ -1.35
LRP6-207ENST00000545658 RNFT1Q5M7Z0 435 aa6.62□□□□□ -1.35
LRP6-207ENST00000545658 CCDC85AQ96PX6 553 aaPredicted RBP6.62□□□□□ -1.35
LRP6-207ENST00000545658 CDCA7Q9BWT1 371 aaPredicted RBP6.62□□□□□ -1.35
LRP6-207ENST00000545658 OSBPL3Q9H4L5 887 aa6.62□□□□□ -1.35
LRP6-207ENST00000545658 GDPD2Q9HCC8 539 aa6.62□□□□□ -1.35
LRP6-207ENST00000545658 ARHGEF10LQ9HCE6 1279 aa6.62□□□□□ -1.35
LRP6-207ENST00000545658 RAB6BQ9NRW1 208 aa6.62□□□□□ -1.35
LRP6-207ENST00000545658 CUEDC1Q9NWM3 386 aaPredicted RBP6.62□□□□□ -1.35
LRP6-207ENST00000545658 ZNF142P52746 1687 aaPredicted RBP6.61□□□□□ -1.35
LRP6-207ENST00000545658 ABCA6Q8N139 1617 aa6.61□□□□□ -1.35
LRP6-207ENST00000545658 CEP170BQ9Y4F5 1589 aaPredicted RBP6.61□□□□□ -1.35
LRP6-207ENST00000545658 MLH3Q9UHC1 1453 aa6.61□□□□□ -1.35
LRP6-207ENST00000545658 EIF4G2P78344 907 aaKnown RBP eCLIP6.61□□□□□ -1.35
LRP6-207ENST00000545658 VAC14Q08AM6 782 aa6.61□□□□□ -1.35
LRP6-207ENST00000545658 POU4F2Q12837 409 aa6.61□□□□□ -1.35
LRP6-207ENST00000545658 MYO3AQ8NEV4 1616 aa6.61□□□□□ -1.35
LRP6-207ENST00000545658 SRCAPQ6ZRS2 3230 aa6.61□□□□□ -1.35
LRP6-207ENST00000545658 TRAK2O60296 914 aa6.6□□□□□ -1.35
LRP6-207ENST00000545658 MYCP01106 439 aaPredicted RBP6.6□□□□□ -1.35
LRP6-207ENST00000545658 GPC1P35052 558 aa6.6□□□□□ -1.35
LRP6-207ENST00000545658 CLN3Q13286 438 aa6.6□□□□□ -1.35
LRP6-207ENST00000545658 TSGA10IPQ3SY00 556 aa6.6□□□□□ -1.35
LRP6-207ENST00000545658 RIPOR1Q6ZS17 1223 aa6.6□□□□□ -1.35
LRP6-207ENST00000545658 MROH2AA6NES4 1674 aa6.6□□□□□ -1.35
LRP6-207ENST00000545658 SLFNL1Q499Z3 407 aa6.59□□□□□ -1.35
LRP6-207ENST00000545658 GAS2L1Q99501 681 aaPredicted RBP6.59□□□□□ -1.35
LRP6-207ENST00000545658 DOLKQ9UPQ8 538 aa6.59□□□□□ -1.35
LRP6-207ENST00000545658 RNF135Q8IUD6 432 aa6.58□□□□□ -1.36
LRP6-207ENST00000545658 GRIP2Q9C0E4 1043 aa6.58□□□□□ -1.36
LRP6-207ENST00000545658 CDK13Q14004 1512 aaKnown RBP6.58□□□□□ -1.36
LRP6-207ENST00000545658 VWDEQ8N2E2 1590 aa6.57□□□□□ -1.36
LRP6-207ENST00000545658 NEURL4Q96JN8 1562 aa6.57□□□□□ -1.36
LRP6-207ENST00000545658 ARHGAP5Q13017 1502 aa6.57□□□□□ -1.36
LRP6-207ENST00000545658 SETD1AO15047 1707 aaKnown RBP6.57□□□□□ -1.36
LRP6-207ENST00000545658 SUPT6HQ7KZ85 1726 aaKnown RBP6.57□□□□□ -1.36
LRP6-207ENST00000545658 MYO5CQ9NQX4 1742 aa6.57□□□□□ -1.36
LRP6-207ENST00000545658 GNRH1P01148 92 aa6.57□□□□□ -1.36
LRP6-207ENST00000545658 IL2RAP01589 272 aa6.57□□□□□ -1.36
LRP6-207ENST00000545658 MCM6Q14566 821 aa6.57□□□□□ -1.36
LRP6-207ENST00000545658 OXLD1Q5BKU9 147 aa6.57□□□□□ -1.36
LRP6-207ENST00000545658 NBPF10Q6P3W6 841 aaKnown RBP6.57□□□□□ -1.36
LRP6-207ENST00000545658 NBPF15Q8N660 670 aa6.57□□□□□ -1.36
LRP6-207ENST00000545658 CNKSR1Q969H4 720 aa6.57□□□□□ -1.36
LRP6-207ENST00000545658 A2ML1A8K2U0 1454 aa6.57□□□□□ -1.36
LRP6-207ENST00000545658 GPR25O00155 361 aa6.56□□□□□ -1.36
LRP6-207ENST00000545658 CENPCQ03188 943 aa6.56□□□□□ -1.36
LRP6-207ENST00000545658 DBN1Q16643 649 aa6.56□□□□□ -1.36
LRP6-207ENST00000545658 TRIM22Q8IYM9 498 aa6.56□□□□□ -1.36
LRP6-207ENST00000545658 PHTF2Q8N3S3 785 aa6.56□□□□□ -1.36
LRP6-207ENST00000545658 WHAMMQ8TF30 809 aa6.56□□□□□ -1.36
LRP6-207ENST00000545658 ZNF837Q96EG3 531 aaPredicted RBP6.56□□□□□ -1.36
LRP6-207ENST00000545658 ESYT1Q9BSJ8 1104 aa6.56□□□□□ -1.36
LRP6-207ENST00000545658 TIMMDC1Q9NPL8 285 aa6.56□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms