RNA–Protein interactions for RNA: ENST00000545368.5

CDCA3-210, Transcript of cell division cycle associated 3, humanhuman

TSL 3

Gene CDCA3, Length 619 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDCA3-210ENST00000545368 NUP188Q5SRE5 1749 aa16.74■□□□□ 0.27
CDCA3-210ENST00000545368 EIF2S2P20042 333 aaKnown RBP16.74■□□□□ 0.27
CDCA3-210ENST00000545368 KCNQ4P56696 695 aa16.74■□□□□ 0.27
CDCA3-210ENST00000545368 USP16Q9Y5T5 823 aa16.74■□□□□ 0.27
CDCA3-210ENST00000545368 CCDC30Q5VVM6 783 aa16.73■□□□□ 0.27
CDCA3-210ENST00000545368 LRRC4BQ9NT99 713 aa16.73■□□□□ 0.27
CDCA3-210ENST00000545368 ERBB4Q15303 1308 aa16.72■□□□□ 0.27
CDCA3-210ENST00000545368 CNTNAP4Q9C0A0 1308 aa16.72■□□□□ 0.27
CDCA3-210ENST00000545368 VAMP4O75379 141 aa16.72■□□□□ 0.27
CDCA3-210ENST00000545368 CYP19A1P11511 503 aaPredicted RBP16.72■□□□□ 0.27
CDCA3-210ENST00000545368 PROM2Q8N271 834 aa16.72■□□□□ 0.27
CDCA3-210ENST00000545368 LINC00116Q8NCU8 138 aa16.72■□□□□ 0.27
CDCA3-210ENST00000545368 ZNF428Q96B54 188 aa16.72■□□□□ 0.27
CDCA3-210ENST00000545368 CRKLP46109 303 aaKnown RBP16.71■□□□□ 0.27
CDCA3-210ENST00000545368 NECTIN2Q92692 538 aa16.71■□□□□ 0.27
CDCA3-210ENST00000545368 AK7Q96M32 723 aa16.71■□□□□ 0.27
CDCA3-210ENST00000545368 STK31Q9BXU1 1019 aa16.71■□□□□ 0.27
CDCA3-210ENST00000545368 CCDC87Q9NVE4 849 aa16.71■□□□□ 0.27
CDCA3-210ENST00000545368 CACNA1FO60840 1977 aa16.69■□□□□ 0.26
CDCA3-210ENST00000545368 RC3H1Q5TC82 1133 aaKnown RBP16.69■□□□□ 0.26
CDCA3-210ENST00000545368 DBF4Q9UBU7 674 aaPredicted RBP16.69■□□□□ 0.26
CDCA3-210ENST00000545368 MYH14Q7Z406 1995 aaKnown RBP16.69■□□□□ 0.26
CDCA3-210ENST00000545368 A1BGP04217 495 aa16.68■□□□□ 0.26
CDCA3-210ENST00000545368 CANXP27824 592 aaKnown RBP16.68■□□□□ 0.26
CDCA3-210ENST00000545368 NPM2Q86SE8 214 aaKnown RBP16.68■□□□□ 0.26
CDCA3-210ENST00000545368 CHPF2Q9P2E5 772 aa16.68■□□□□ 0.26
CDCA3-210ENST00000545368 ZBTB1Q9Y2K1 713 aa16.68■□□□□ 0.26
CDCA3-210ENST00000545368 GNPATO15228 680 aa16.67■□□□□ 0.26
CDCA3-210ENST00000545368 ALDH1L2Q3SY69 923 aa16.67■□□□□ 0.26
CDCA3-210ENST00000545368 NBPF14Q5TI25 921 aa16.67■□□□□ 0.26
CDCA3-210ENST00000545368 DDX21Q9NR30 783 aaKnown RBP eCLIP16.67■□□□□ 0.26
CDCA3-210ENST00000545368 STK32BQ9NY57 414 aa16.67■□□□□ 0.26
CDCA3-210ENST00000545368 UBR3Q6ZT12 1888 aa16.67■□□□□ 0.26
CDCA3-210ENST00000545368 TCERG1O14776 1098 aaKnown RBP16.66■□□□□ 0.26
CDCA3-210ENST00000545368 MYL6BP14649 208 aa16.66■□□□□ 0.26
CDCA3-210ENST00000545368 PIP4K2AP48426 406 aaPredicted RBP16.66■□□□□ 0.26
CDCA3-210ENST00000545368 INTS5Q6P9B9 1019 aaKnown RBP16.66■□□□□ 0.26
CDCA3-210ENST00000545368 SMC4Q9NTJ3 1288 aa16.66■□□□□ 0.26
CDCA3-210ENST00000545368 HYPKQ9NX55 129 aa16.66■□□□□ 0.26
CDCA3-210ENST00000545368 RTCBQ9Y3I0 505 aaKnown RBP16.66■□□□□ 0.26
CDCA3-210ENST00000545368 ZNF330Q9Y3S2 320 aaPredicted RBP16.66■□□□□ 0.26
CDCA3-210ENST00000545368 RPS6KA4O75676 772 aa16.65■□□□□ 0.26
CDCA3-210ENST00000545368 IL6STP40189 918 aaPredicted RBP16.65■□□□□ 0.26
CDCA3-210ENST00000545368 RARSP54136 660 aaKnown RBP16.65■□□□□ 0.26
CDCA3-210ENST00000545368 AKT1S1Q96B36 256 aa16.65■□□□□ 0.26
CDCA3-210ENST00000545368 TUBGCP6Q96RT7 1819 aa16.65■□□□□ 0.26
CDCA3-210ENST00000545368 QSER1Q2KHR3 1735 aa16.65■□□□□ 0.26
CDCA3-210ENST00000545368 NBPF26B4DH59 902 aa16.64■□□□□ 0.25
CDCA3-210ENST00000545368 SLC4A2P04920 1241 aa16.64■□□□□ 0.25
CDCA3-210ENST00000545368 PDIA6Q15084 440 aa16.64■□□□□ 0.25
CDCA3-210ENST00000545368 ZNF827Q17R98 1081 aa16.64■□□□□ 0.25
CDCA3-210ENST00000545368 NBPF10Q6P3W6 841 aaKnown RBP16.64■□□□□ 0.25
CDCA3-210ENST00000545368 NBPF15Q8N660 670 aa16.64■□□□□ 0.25
CDCA3-210ENST00000545368 SSH1Q8WYL5 1049 aa16.64■□□□□ 0.25
CDCA3-210ENST00000545368 BCL2L13Q9BXK5 485 aa16.64■□□□□ 0.25
CDCA3-210ENST00000545368 TFCP2L1Q9NZI6 479 aa16.64■□□□□ 0.25
CDCA3-210ENST00000545368 RCAN3Q9UKA8 241 aa16.64■□□□□ 0.25
CDCA3-210ENST00000545368 COL15A1P39059 1388 aa16.64■□□□□ 0.25
CDCA3-210ENST00000545368 A0A087WZG4 1122 aa16.63■□□□□ 0.25
CDCA3-210ENST00000545368 ANXA1P04083 346 aa16.63■□□□□ 0.25
CDCA3-210ENST00000545368 ADRA2BP18089 450 aa16.63■□□□□ 0.25
CDCA3-210ENST00000545368 SSFA2P28290 1259 aa16.63■□□□□ 0.25
CDCA3-210ENST00000545368 SLC15A2Q16348 729 aa16.63■□□□□ 0.25
CDCA3-210ENST00000545368 PROSER3Q2NL68 480 aa16.63■□□□□ 0.25
CDCA3-210ENST00000545368 ANO8Q9HCE9 1232 aaPredicted RBP16.63■□□□□ 0.25
CDCA3-210ENST00000545368 SOCS7O14512 581 aa16.62■□□□□ 0.25
CDCA3-210ENST00000545368 PHF14O94880 888 aa16.62■□□□□ 0.25
CDCA3-210ENST00000545368 CENPBP07199 599 aaPredicted RBP16.62■□□□□ 0.25
CDCA3-210ENST00000545368 EIF5P55010 431 aaKnown RBP16.62■□□□□ 0.25
CDCA3-210ENST00000545368 KIF16BQ96L93 1317 aa16.62■□□□□ 0.25
CDCA3-210ENST00000545368 C4AP0C0L4 1744 aa16.62■□□□□ 0.25
CDCA3-210ENST00000545368 TRAPPC3LQ5T215 181 aa16.61■□□□□ 0.25
CDCA3-210ENST00000545368 KIF6Q6ZMV9 814 aa16.61■□□□□ 0.25
CDCA3-210ENST00000545368 MRPL50Q8N5N7 158 aaKnown RBP16.61■□□□□ 0.25
CDCA3-210ENST00000545368 FLAD1Q8NFF5 587 aa16.61■□□□□ 0.25
CDCA3-210ENST00000545368 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP16.6■□□□□ 0.25
CDCA3-210ENST00000545368 DDX58O95786 925 aaKnown RBP16.6■□□□□ 0.25
CDCA3-210ENST00000545368 AIMP1Q12904 312 aaKnown RBP16.6■□□□□ 0.25
CDCA3-210ENST00000545368 FLIIQ13045 1269 aa16.6■□□□□ 0.25
CDCA3-210ENST00000545368 LRP10Q7Z4F1 713 aa16.6■□□□□ 0.25
CDCA3-210ENST00000545368 DZIP3Q86Y13 1208 aaKnown RBP16.6■□□□□ 0.25
CDCA3-210ENST00000545368 XAGE3Q8WTP9 111 aa16.6■□□□□ 0.25
CDCA3-210ENST00000545368 ARXQ96QS3 562 aa16.6■□□□□ 0.25
CDCA3-210ENST00000545368 PHAXQ9H814 394 aaKnown RBP16.6■□□□□ 0.25
CDCA3-210ENST00000545368 SCN7AQ01118 1682 aa16.59■□□□□ 0.25
CDCA3-210ENST00000545368 BCORQ6W2J9 1755 aa16.59■□□□□ 0.25
CDCA3-210ENST00000545368 BCAR3O75815 825 aa16.59■□□□□ 0.25
CDCA3-210ENST00000545368 BRPF1P55201 1214 aaPredicted RBP16.59■□□□□ 0.25
CDCA3-210ENST00000545368 COPS6Q7L5N1 327 aa16.59■□□□□ 0.25
CDCA3-210ENST00000545368 MSH5O43196 834 aa16.58■□□□□ 0.24
CDCA3-210ENST00000545368 RFC4P35249 363 aa16.58■□□□□ 0.24
CDCA3-210ENST00000545368 FKBP5Q13451 457 aaPredicted RBP16.58■□□□□ 0.24
CDCA3-210ENST00000545368 PTPRCP08575 1304 aa16.58■□□□□ 0.24
CDCA3-210ENST00000545368 ARFGEF2Q9Y6D5 1785 aa16.57■□□□□ 0.24
CDCA3-210ENST00000545368 PNPLA7Q6ZV29 1317 aa16.57■□□□□ 0.24
CDCA3-210ENST00000545368 IPO8O15397 1037 aaKnown RBP16.57■□□□□ 0.24
CDCA3-210ENST00000545368 ZPR1O75312 459 aa16.57■□□□□ 0.24
CDCA3-210ENST00000545368 G2E3Q7L622 706 aa16.57■□□□□ 0.24
CDCA3-210ENST00000545368 AMIGO3Q86WK7 504 aa16.57■□□□□ 0.24
CDCA3-210ENST00000545368 ARHGEF1Q92888 912 aaKnown RBP16.57■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms