RNA–Protein interactions for RNA: ENST00000545284.1

COPA-207, Transcript of coatomer protein complex subunit alpha, humanhuman

TSL 2

Gene COPA, Length 879 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPA-207ENST00000545284 RASSF10A6NK89 507 aa10.16□□□□□ -0.78
COPA-207ENST00000545284 CABP4P57796 275 aa10.16□□□□□ -0.78
COPA-207ENST00000545284 CDCA8Q53HL2 280 aa10.16□□□□□ -0.78
COPA-207ENST00000545284 L3MBTL3Q96JM7 780 aaPredicted RBP10.16□□□□□ -0.78
COPA-207ENST00000545284 SIN3AQ96ST3 1273 aa10.16□□□□□ -0.78
COPA-207ENST00000545284 SRP68Q9UHB9 627 aaKnown RBP10.16□□□□□ -0.78
COPA-207ENST00000545284 EMILIN1Q9Y6C2 1016 aa10.16□□□□□ -0.78
COPA-207ENST00000545284 SBF1O95248 1867 aa10.15□□□□□ -0.78
COPA-207ENST00000545284 ST20-MTHFSA0A0A6YYL1 179 aa10.15□□□□□ -0.78
COPA-207ENST00000545284 ITGBL1O95965 494 aaPredicted RBP10.15□□□□□ -0.78
COPA-207ENST00000545284 HSPA8P11142 646 aaKnown RBP10.15□□□□□ -0.78
COPA-207ENST00000545284 NEUROD1Q13562 356 aa10.15□□□□□ -0.78
COPA-207ENST00000545284 DEFB115Q30KQ5 88 aa10.15□□□□□ -0.78
COPA-207ENST00000545284 PLEKHO1Q53GL0 409 aaPredicted RBP10.15□□□□□ -0.78
COPA-207ENST00000545284 SOGA3Q5TF21 947 aa10.15□□□□□ -0.78
COPA-207ENST00000545284 NARFQ9UHQ1 456 aa10.15□□□□□ -0.78
COPA-207ENST00000545284 SERPINB2P05120 415 aa10.14□□□□□ -0.79
COPA-207ENST00000545284 NFIXQ14938 502 aa10.14□□□□□ -0.79
COPA-207ENST00000545284 INTS5Q6P9B9 1019 aaKnown RBP10.14□□□□□ -0.79
COPA-207ENST00000545284 C2CD5Q86YS7 1000 aa10.14□□□□□ -0.79
COPA-207ENST00000545284 PPM1GO15355 546 aaPredicted RBP10.13□□□□□ -0.79
COPA-207ENST00000545284 PTCD1O75127 700 aaKnown RBP10.13□□□□□ -0.79
COPA-207ENST00000545284 PDE6BP35913 854 aa10.13□□□□□ -0.79
COPA-207ENST00000545284 USPL1Q5W0Q7 1092 aa10.13□□□□□ -0.79
COPA-207ENST00000545284 PNMA8AQ86V59 439 aaPredicted RBP10.13□□□□□ -0.79
COPA-207ENST00000545284 BEGAINQ9BUH8 593 aa10.13□□□□□ -0.79
COPA-207ENST00000545284 BRIP1Q9BX63 1249 aa10.13□□□□□ -0.79
COPA-207ENST00000545284 TAOK3Q9H2K8 898 aa10.13□□□□□ -0.79
COPA-207ENST00000545284 SOS1Q07889 1333 aaPredicted RBP10.12□□□□□ -0.79
COPA-207ENST00000545284 WDR33Q9C0J8 1336 aaKnown RBP10.12□□□□□ -0.79
COPA-207ENST00000545284 CCDC85CA6NKD9 419 aa10.12□□□□□ -0.79
COPA-207ENST00000545284 POTEIP0CG38 1075 aa10.12□□□□□ -0.79
COPA-207ENST00000545284 POTEJP0CG39 1038 aa10.12□□□□□ -0.79
COPA-207ENST00000545284 MTHFSP49914 203 aa10.12□□□□□ -0.79
COPA-207ENST00000545284 TAF1DQ9H5J8 278 aaPredicted RBP10.12□□□□□ -0.79
COPA-207ENST00000545284 CA12O43570 354 aa10.11□□□□□ -0.79
COPA-207ENST00000545284 DDNO94850 711 aaPredicted RBP10.11□□□□□ -0.79
COPA-207ENST00000545284 ECE1P42892 770 aa10.11□□□□□ -0.79
COPA-207ENST00000545284 NFATC2IPQ8NCF5 419 aa10.11□□□□□ -0.79
COPA-207ENST00000545284 CNKSR1Q969H4 720 aa10.11□□□□□ -0.79
COPA-207ENST00000545284 COL5A3P25940 1745 aaPredicted RBP10.1□□□□□ -0.79
COPA-207ENST00000545284 C1orf141Q5JVX7 400 aa10.1□□□□□ -0.79
COPA-207ENST00000545284 VSIG10Q8N0Z9 540 aa10.1□□□□□ -0.79
COPA-207ENST00000545284 POLKQ9UBT6 870 aa10.1□□□□□ -0.79
COPA-207ENST00000545284 C21orf2O43822 256 aa10.09□□□□□ -0.79
COPA-207ENST00000545284 CYP19A1P11511 503 aaPredicted RBP10.09□□□□□ -0.79
COPA-207ENST00000545284 MAP2K2P36507 400 aa10.09□□□□□ -0.79
COPA-207ENST00000545284 EIF4A2Q14240 407 aaKnown RBP10.09□□□□□ -0.79
COPA-207ENST00000545284 ZNF530Q6P9A1 599 aaPredicted RBP10.09□□□□□ -0.79
COPA-207ENST00000545284 ZNF622Q969S3 477 aaKnown RBP eCLIP10.09□□□□□ -0.791e-7■□□□□ 9.8
COPA-207ENST00000545284 HACL1Q9UJ83 578 aa10.09□□□□□ -0.79
COPA-207ENST00000545284 A0A087WZG4 1122 aa10.08□□□□□ -0.8
COPA-207ENST00000545284 STYK1Q6J9G0 422 aa10.08□□□□□ -0.8
COPA-207ENST00000545284 CNTROBQ8N137 903 aa10.08□□□□□ -0.8
COPA-207ENST00000545284 CARD14Q9BXL6 1004 aa10.08□□□□□ -0.8
COPA-207ENST00000545284 BCL2L12Q9HB09 334 aa10.08□□□□□ -0.8
COPA-207ENST00000545284 COL15A1P39059 1388 aa10.08□□□□□ -0.8
COPA-207ENST00000545284 MYH14Q7Z406 1995 aaKnown RBP10.07□□□□□ -0.8
COPA-207ENST00000545284 EPHX2P34913 555 aa10.07□□□□□ -0.8
COPA-207ENST00000545284 DNAJC10Q8IXB1 793 aa10.07□□□□□ -0.8
COPA-207ENST00000545284 GPR101Q96P66 508 aaPredicted RBP10.07□□□□□ -0.8
COPA-207ENST00000545284 CLEC11AQ9Y240 323 aa10.07□□□□□ -0.8
COPA-207ENST00000545284 NRXN2Q9P2S2 1712 aa10.07□□□□□ -0.8
COPA-207ENST00000545284 EAPPQ56P03 285 aaPredicted RBP10.06□□□□□ -0.8
COPA-207ENST00000545284 MASTLQ96GX5 879 aa10.06□□□□□ -0.8
COPA-207ENST00000545284 DDX21Q9NR30 783 aaKnown RBP eCLIP10.06□□□□□ -0.8
COPA-207ENST00000545284 ABT1Q9ULW3 272 aaKnown RBP10.06□□□□□ -0.8
COPA-207ENST00000545284 TIAM2Q8IVF5 1701 aa10.05□□□□□ -0.8
COPA-207ENST00000545284 STARD3NLO95772 234 aa10.05□□□□□ -0.8
COPA-207ENST00000545284 CAPNS2Q96L46 248 aa10.05□□□□□ -0.8
COPA-207ENST00000545284 SLC52A2Q9HAB3 445 aa10.05□□□□□ -0.8
COPA-207ENST00000545284 ZBTB1Q9Y2K1 713 aa10.05□□□□□ -0.8
COPA-207ENST00000545284 CARMIL3Q8ND23 1372 aa10.04□□□□□ -0.8
COPA-207ENST00000545284 ADAMTS7Q9UKP4 1686 aa10.04□□□□□ -0.8
COPA-207ENST00000545284 FZD9O00144 591 aa10.04□□□□□ -0.8
COPA-207ENST00000545284 SRGNP10124 158 aa10.04□□□□□ -0.8
COPA-207ENST00000545284 EIF5P55010 431 aaKnown RBP10.04□□□□□ -0.8
COPA-207ENST00000545284 CCDC93Q567U6 631 aa10.04□□□□□ -0.8
COPA-207ENST00000545284 AKAP4Q5JQC9 854 aa10.04□□□□□ -0.8
COPA-207ENST00000545284 PRR5LQ6MZQ0 368 aa10.04□□□□□ -0.8
COPA-207ENST00000545284 PRPF40BQ6NWY9 871 aaKnown RBP10.04□□□□□ -0.8
COPA-207ENST00000545284 RTKN2Q8IZC4 609 aa10.04□□□□□ -0.8
COPA-207ENST00000545284 GPC2Q8N158 579 aa10.04□□□□□ -0.8
COPA-207ENST00000545284 C7orf43Q8WVR3 580 aa10.04□□□□□ -0.8
COPA-207ENST00000545284 HHIPL1Q96JK4 782 aa10.04□□□□□ -0.8
COPA-207ENST00000545284 TEX13AQ9BXU3 409 aaPredicted RBP10.04□□□□□ -0.8
COPA-207ENST00000545284 MCOLN1Q9GZU1 580 aa10.04□□□□□ -0.8
COPA-207ENST00000545284 SCN4AP35499 1836 aa10.04□□□□□ -0.8
COPA-207ENST00000545284 DLEC1Q9Y238 1755 aa10.03□□□□□ -0.8
COPA-207ENST00000545284 VIRMAQ69YN4 1812 aaKnown RBP10.03□□□□□ -0.8
COPA-207ENST00000545284 ST5P78524 1137 aa10.03□□□□□ -0.8
COPA-207ENST00000545284 FKBP4Q02790 459 aaKnown RBP eCLIP10.03□□□□□ -0.8
COPA-207ENST00000545284 MAP1SQ66K74 1059 aaPredicted RBP10.03□□□□□ -0.8
COPA-207ENST00000545284 SETDB2Q96T68 719 aa10.03□□□□□ -0.8
COPA-207ENST00000545284 ZNF219Q9P2Y4 722 aaPredicted RBP10.03□□□□□ -0.8
COPA-207ENST00000545284 ANKRD26Q9UPS8 1709 aa10.03□□□□□ -0.8
COPA-207ENST00000545284 KLRG2A4D1S0 409 aaPredicted RBP10.02□□□□□ -0.81
COPA-207ENST00000545284 PRPF38BQ5VTL8 546 aaKnown RBP10.02□□□□□ -0.81
COPA-207ENST00000545284 BICDL1Q6ZP65 573 aa10.02□□□□□ -0.81
COPA-207ENST00000545284 CNBD1Q8NA66 436 aa10.02□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 43.4 ms