RNA–Protein interactions for RNA: ENST00000545224.5

SRRM4-203, Transcript of serine/arginine repetitive matrix 4, humanhuman

TSL 4

Gene SRRM4, Length 461 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRRM4-203ENST00000545224 TJP1Q07157 1748 aa14.79□□□□□ -0.04
SRRM4-203ENST00000545224 SLC27A3Q5K4L6 730 aa14.79□□□□□ -0.04
SRRM4-203ENST00000545224 DUSP27Q5VZP5 1158 aa14.79□□□□□ -0.04
SRRM4-203ENST00000545224 FMNL2Q96PY5 1086 aa14.79□□□□□ -0.04
SRRM4-203ENST00000545224 E9PSI1 815 aa14.78□□□□□ -0.04
SRRM4-203ENST00000545224 TTC5Q8N0Z6 440 aa14.78□□□□□ -0.04
SRRM4-203ENST00000545224 C8orf58Q8NAV2 365 aa14.78□□□□□ -0.04
SRRM4-203ENST00000545224 RBM42Q9BTD8 480 aaKnown RBP14.78□□□□□ -0.04
SRRM4-203ENST00000545224 USP16Q9Y5T5 823 aa14.78□□□□□ -0.04
SRRM4-203ENST00000545224 ATP6V1AP38606 617 aa14.77□□□□□ -0.05
SRRM4-203ENST00000545224 DNAJC10Q8IXB1 793 aa14.77□□□□□ -0.05
SRRM4-203ENST00000545224 TSPYL6Q8N831 410 aa14.77□□□□□ -0.05
SRRM4-203ENST00000545224 LINC00116Q8NCU8 138 aa14.77□□□□□ -0.05
SRRM4-203ENST00000545224 CCNL1Q9UK58 526 aaPredicted RBP14.77□□□□□ -0.05
SRRM4-203ENST00000545224 TAF1LQ8IZX4 1826 aa14.77□□□□□ -0.05
SRRM4-203ENST00000545224 COL5A3P25940 1745 aaPredicted RBP14.76□□□□□ -0.05
SRRM4-203ENST00000545224 SNRPA1P09661 255 aaKnown RBP14.76□□□□□ -0.05
SRRM4-203ENST00000545224 CYP19A1P11511 503 aaPredicted RBP14.76□□□□□ -0.05
SRRM4-203ENST00000545224 GPR162Q16538 588 aa14.76□□□□□ -0.05
SRRM4-203ENST00000545224 C5P01031 1676 aa14.76□□□□□ -0.05
SRRM4-203ENST00000545224 MYH14Q7Z406 1995 aaKnown RBP14.75□□□□□ -0.05
SRRM4-203ENST00000545224 EXOSC9Q06265 439 aaKnown RBP14.75□□□□□ -0.05
SRRM4-203ENST00000545224 SLC16A10Q8TF71 515 aa14.75□□□□□ -0.05
SRRM4-203ENST00000545224 MYH16Q9H6N6 1097 aa14.75□□□□□ -0.05
SRRM4-203ENST00000545224 VAMP4O75379 141 aa14.74□□□□□ -0.05
SRRM4-203ENST00000545224 HOXB7P09629 217 aa14.74□□□□□ -0.05
SRRM4-203ENST00000545224 INTS5Q6P9B9 1019 aaKnown RBP14.74□□□□□ -0.05
SRRM4-203ENST00000545224 AKT1S1Q96B36 256 aa14.74□□□□□ -0.05
SRRM4-203ENST00000545224 TEX13AQ9BXU3 409 aaPredicted RBP14.74□□□□□ -0.05
SRRM4-203ENST00000545224 QSER1Q2KHR3 1735 aa14.74□□□□□ -0.05
SRRM4-203ENST00000545224 RC3H1Q5TC82 1133 aaKnown RBP14.73□□□□□ -0.05
SRRM4-203ENST00000545224 SOS1Q07889 1333 aaPredicted RBP14.72□□□□□ -0.05
SRRM4-203ENST00000545224 CNTNAP4Q9C0A0 1308 aa14.72□□□□□ -0.05
SRRM4-203ENST00000545224 PDIA6Q15084 440 aa14.72□□□□□ -0.05
SRRM4-203ENST00000545224 LRP10Q7Z4F1 713 aa14.72□□□□□ -0.05
SRRM4-203ENST00000545224 AMIGO3Q86WK7 504 aa14.72□□□□□ -0.05
SRRM4-203ENST00000545224 YTHDC1Q96MU7 727 aaKnown RBP14.72□□□□□ -0.05
SRRM4-203ENST00000545224 C4BP0C0L5 1744 aa14.72□□□□□ -0.05
SRRM4-203ENST00000545224 COL24A1Q17RW2 1714 aa14.72□□□□□ -0.05
SRRM4-203ENST00000545224 LAMB4A4D0S4 1761 aa14.71□□□□□ -0.05
SRRM4-203ENST00000545224 NBPF26B4DH59 902 aa14.71□□□□□ -0.05
SRRM4-203ENST00000545224 ELL2O00472 640 aaPredicted RBP14.71□□□□□ -0.05
SRRM4-203ENST00000545224 A1BGP04217 495 aa14.71□□□□□ -0.05
SRRM4-203ENST00000545224 POLD1P28340 1107 aa14.71□□□□□ -0.05
SRRM4-203ENST00000545224 CRKLP46109 303 aaKnown RBP14.71□□□□□ -0.05
SRRM4-203ENST00000545224 ZNF827Q17R98 1081 aa14.71□□□□□ -0.05
SRRM4-203ENST00000545224 TWISTNBQ3B726 338 aaPredicted RBP14.71□□□□□ -0.05
SRRM4-203ENST00000545224 IFFO2Q5TF58 517 aa14.71□□□□□ -0.05
SRRM4-203ENST00000545224 NBPF10Q6P3W6 841 aaKnown RBP14.71□□□□□ -0.05
SRRM4-203ENST00000545224 NBPF15Q8N660 670 aa14.71□□□□□ -0.05
SRRM4-203ENST00000545224 STARD3NLO95772 234 aa14.69□□□□□ -0.06
SRRM4-203ENST00000545224 ZBTB1Q9Y2K1 713 aa14.69□□□□□ -0.06
SRRM4-203ENST00000545224 UBR3Q6ZT12 1888 aa14.68□□□□□ -0.06
SRRM4-203ENST00000545224 RPS6KA4O75676 772 aa14.68□□□□□ -0.06
SRRM4-203ENST00000545224 EIF5P55010 431 aaKnown RBP14.68□□□□□ -0.06
SRRM4-203ENST00000545224 CCDC87Q9NVE4 849 aa14.68□□□□□ -0.06
SRRM4-203ENST00000545224 ERBB4Q15303 1308 aa14.67□□□□□ -0.06
SRRM4-203ENST00000545224 GRIN3BO60391 1043 aa14.67□□□□□ -0.06
SRRM4-203ENST00000545224 EIF2S2P20042 333 aaKnown RBP14.67□□□□□ -0.06
SRRM4-203ENST00000545224 HMGB2P26583 209 aaKnown RBP14.67□□□□□ -0.06
SRRM4-203ENST00000545224 PIP4K2AP48426 406 aaPredicted RBP14.67□□□□□ -0.06
SRRM4-203ENST00000545224 PROSER3Q2NL68 480 aa14.67□□□□□ -0.06
SRRM4-203ENST00000545224 SMIM5Q71RC9 77 aa14.67□□□□□ -0.06
SRRM4-203ENST00000545224 TUBGCP6Q96RT7 1819 aa14.66□□□□□ -0.06
SRRM4-203ENST00000545224 CT47B1P0C2W7 299 aaPredicted RBP14.66□□□□□ -0.06
SRRM4-203ENST00000545224 IL6STP40189 918 aaPredicted RBP14.66□□□□□ -0.06
SRRM4-203ENST00000545224 HDGFL1Q5TGJ6 251 aa14.66□□□□□ -0.06
SRRM4-203ENST00000545224 PELP1Q8IZL8 1130 aaKnown RBP14.66□□□□□ -0.06
SRRM4-203ENST00000545224 KLHL34Q8N239 644 aa14.66□□□□□ -0.06
SRRM4-203ENST00000545224 DDX21Q9NR30 783 aaKnown RBP eCLIP14.66□□□□□ -0.06
SRRM4-203ENST00000545224 ANXA1P04083 346 aa14.65□□□□□ -0.06
SRRM4-203ENST00000545224 NECTIN2Q92692 538 aa14.65□□□□□ -0.06
SRRM4-203ENST00000545224 TFCP2L1Q9NZI6 479 aa14.65□□□□□ -0.06
SRRM4-203ENST00000545224 CHPF2Q9P2E5 772 aa14.65□□□□□ -0.06
SRRM4-203ENST00000545224 PNPLA7Q6ZV29 1317 aa14.65□□□□□ -0.06
SRRM4-203ENST00000545224 GNPATO15228 680 aa14.64□□□□□ -0.07
SRRM4-203ENST00000545224 CANXP27824 592 aaKnown RBP14.64□□□□□ -0.07
SRRM4-203ENST00000545224 CCDC30Q5VVM6 783 aa14.64□□□□□ -0.07
SRRM4-203ENST00000545224 ZNF428Q96B54 188 aa14.64□□□□□ -0.07
SRRM4-203ENST00000545224 SSFA2P28290 1259 aa14.63□□□□□ -0.07
SRRM4-203ENST00000545224 BRPF1P55201 1214 aaPredicted RBP14.63□□□□□ -0.07
SRRM4-203ENST00000545224 COL23A1Q86Y22 540 aaPredicted RBP14.63□□□□□ -0.07
SRRM4-203ENST00000545224 ARHGEF1Q92888 912 aaKnown RBP14.63□□□□□ -0.07
SRRM4-203ENST00000545224 AK7Q96M32 723 aa14.63□□□□□ -0.07
SRRM4-203ENST00000545224 DBF4Q9UBU7 674 aaPredicted RBP14.63□□□□□ -0.07
SRRM4-203ENST00000545224 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP14.62□□□□□ -0.07
SRRM4-203ENST00000545224 TCERG1O14776 1098 aaKnown RBP14.62□□□□□ -0.07
SRRM4-203ENST00000545224 ADRA2BP18089 450 aa14.62□□□□□ -0.07
SRRM4-203ENST00000545224 RARSP54136 660 aaKnown RBP14.62□□□□□ -0.07
SRRM4-203ENST00000545224 ALDH1L2Q3SY69 923 aa14.62□□□□□ -0.07
SRRM4-203ENST00000545224 G2E3Q7L622 706 aa14.62□□□□□ -0.07
SRRM4-203ENST00000545224 MRPL50Q8N5N7 158 aaKnown RBP14.62□□□□□ -0.07
SRRM4-203ENST00000545224 SSH1Q8WYL5 1049 aa14.62□□□□□ -0.07
SRRM4-203ENST00000545224 PHAXQ9H814 394 aaKnown RBP14.62□□□□□ -0.07
SRRM4-203ENST00000545224 RTCBQ9Y3I0 505 aaKnown RBP14.62□□□□□ -0.07
SRRM4-203ENST00000545224 COL15A1P39059 1388 aa14.61□□□□□ -0.07
SRRM4-203ENST00000545224 SLC4A2P04920 1241 aa14.61□□□□□ -0.07
SRRM4-203ENST00000545224 MYL6BP14649 208 aa14.61□□□□□ -0.07
SRRM4-203ENST00000545224 TTLL7Q6ZT98 887 aa14.61□□□□□ -0.07
SRRM4-203ENST00000545224 CHMP4AQ9BY43 222 aa14.61□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms