RNA–Protein interactions for RNA: ENST00000544989.1

HDAC4-216, Transcript of histone deacetylase 4, humanhuman

TSL 5

Gene HDAC4, Length 342 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-216ENST00000544989 TAF7Q15545 349 aaPredicted RBP15.59■□□□□ 0.09
HDAC4-216ENST00000544989 MCM10Q7L590 875 aa15.59■□□□□ 0.09
HDAC4-216ENST00000544989 ZNF496Q96IT1 587 aaPredicted RBP15.59■□□□□ 0.09
HDAC4-216ENST00000544989 A0A087WZG4 1122 aa15.58■□□□□ 0.08
HDAC4-216ENST00000544989 NPM2Q86SE8 214 aaKnown RBP15.58■□□□□ 0.08
HDAC4-216ENST00000544989 SOS1Q07889 1333 aaPredicted RBP15.58■□□□□ 0.08
HDAC4-216ENST00000544989 MMP10P09238 476 aa15.57■□□□□ 0.08
HDAC4-216ENST00000544989 GYS1P13807 737 aa15.57■□□□□ 0.08
HDAC4-216ENST00000544989 SMIM5Q71RC9 77 aa15.57■□□□□ 0.08
HDAC4-216ENST00000544989 USP42Q9H9J4 1324 aaKnown RBP15.57■□□□□ 0.08
HDAC4-216ENST00000544989 SNRPA1P09661 255 aaKnown RBP15.56■□□□□ 0.08
HDAC4-216ENST00000544989 GPR162Q16538 588 aa15.56■□□□□ 0.08
HDAC4-216ENST00000544989 PARP3Q9Y6F1 533 aa15.56■□□□□ 0.08
HDAC4-216ENST00000544989 COL15A1P39059 1388 aa15.55■□□□□ 0.08
HDAC4-216ENST00000544989 GIGYF1O75420 1035 aaPredicted RBP15.55■□□□□ 0.08
HDAC4-216ENST00000544989 ZBTB1Q9Y2K1 713 aa15.55■□□□□ 0.08
HDAC4-216ENST00000544989 IL6STP40189 918 aaPredicted RBP15.54■□□□□ 0.08
HDAC4-216ENST00000544989 RIPK4P57078 832 aa15.54■□□□□ 0.08
HDAC4-216ENST00000544989 DCTN1Q14203 1278 aa15.54■□□□□ 0.08
HDAC4-216ENST00000544989 RUNDC1Q96C34 613 aa15.54■□□□□ 0.08
HDAC4-216ENST00000544989 BABAM1Q9NWV8 329 aa15.54■□□□□ 0.08
HDAC4-216ENST00000544989 NARFQ9UHQ1 456 aa15.54■□□□□ 0.08
HDAC4-216ENST00000544989 GRIN3BO60391 1043 aa15.53■□□□□ 0.08
HDAC4-216ENST00000544989 CANXP27824 592 aaKnown RBP15.53■□□□□ 0.08
HDAC4-216ENST00000544989 EIF5P55010 431 aaKnown RBP15.53■□□□□ 0.08
HDAC4-216ENST00000544989 NLGN2Q8NFZ4 835 aa15.53■□□□□ 0.08
HDAC4-216ENST00000544989 C4AP0C0L4 1744 aa15.52■□□□□ 0.08
HDAC4-216ENST00000544989 TMPOP42166 694 aaKnown RBP15.52■□□□□ 0.08
HDAC4-216ENST00000544989 TGFB2P61812 414 aa15.52■□□□□ 0.08
HDAC4-216ENST00000544989 KCNQ3O43525 872 aa15.51■□□□□ 0.07
HDAC4-216ENST00000544989 USPL1Q5W0Q7 1092 aa15.51■□□□□ 0.07
HDAC4-216ENST00000544989 SRP68Q9UHB9 627 aaKnown RBP15.51■□□□□ 0.07
HDAC4-216ENST00000544989 DLG5Q8TDM6 1919 aa15.51■□□□□ 0.07
HDAC4-216ENST00000544989 ANP32CO43423 234 aa15.5■□□□□ 0.07
HDAC4-216ENST00000544989 FKBP8Q14318 412 aa15.5■□□□□ 0.07
HDAC4-216ENST00000544989 PELP1Q8IZL8 1130 aaKnown RBP15.5■□□□□ 0.07
HDAC4-216ENST00000544989 ADAMTS8Q9UP79 889 aa15.5■□□□□ 0.07
HDAC4-216ENST00000544989 C10orf71Q711Q0 1435 aa15.49■□□□□ 0.07
HDAC4-216ENST00000544989 RGL2O15211 777 aa15.48■□□□□ 0.07
HDAC4-216ENST00000544989 A1BGP04217 495 aa15.48■□□□□ 0.07
HDAC4-216ENST00000544989 TM4SF1P30408 202 aa15.48■□□□□ 0.07
HDAC4-216ENST00000544989 TSPYL4Q9UJ04 414 aa15.48■□□□□ 0.07
HDAC4-216ENST00000544989 USP16Q9Y5T5 823 aa15.48■□□□□ 0.07
HDAC4-216ENST00000544989 POLRMTO00411 1230 aaKnown RBP15.47■□□□□ 0.07
HDAC4-216ENST00000544989 EIF4A1P60842 406 aaKnown RBP15.47■□□□□ 0.07
HDAC4-216ENST00000544989 CCDC146Q8IYE0 955 aa15.47■□□□□ 0.07
HDAC4-216ENST00000544989 MIS18AQ9NYP9 233 aa15.47■□□□□ 0.07
HDAC4-216ENST00000544989 ZNF330Q9Y3S2 320 aaPredicted RBP15.47■□□□□ 0.07
HDAC4-216ENST00000544989 KIF13BQ9NQT8 1826 aa15.46■□□□□ 0.07
HDAC4-216ENST00000544989 CALD1Q05682 793 aaKnown RBP15.46■□□□□ 0.07
HDAC4-216ENST00000544989 THUMPD2Q9BTF0 503 aaKnown RBP15.46■□□□□ 0.07
HDAC4-216ENST00000544989 ZNF652Q9Y2D9 606 aa15.46■□□□□ 0.07
HDAC4-216ENST00000544989 KDM3BQ7LBC6 1761 aa15.45■□□□□ 0.06
HDAC4-216ENST00000544989 DDR1Q08345 913 aa15.45■□□□□ 0.06
HDAC4-216ENST00000544989 NFIXQ14938 502 aa15.45■□□□□ 0.06
HDAC4-216ENST00000544989 NEUROD2Q15784 382 aa15.45■□□□□ 0.06
HDAC4-216ENST00000544989 CLEC4GQ6UXB4 293 aa15.45■□□□□ 0.06
HDAC4-216ENST00000544989 DZIP3Q86Y13 1208 aaKnown RBP15.45■□□□□ 0.06
HDAC4-216ENST00000544989 ERBB4Q15303 1308 aa15.44■□□□□ 0.06
HDAC4-216ENST00000544989 BCL2L12Q9HB09 334 aa15.44■□□□□ 0.06
HDAC4-216ENST00000544989 PDZRN3Q9UPQ7 1066 aa15.44■□□□□ 0.06
HDAC4-216ENST00000544989 TBC1D2BQ9UPU7 963 aa15.44■□□□□ 0.06
HDAC4-216ENST00000544989 PXDNLA1KZ92 1463 aa15.44■□□□□ 0.06
HDAC4-216ENST00000544989 PRAMEF22A3QJZ6 481 aa15.43■□□□□ 0.06
HDAC4-216ENST00000544989 CAMTA2O94983 1202 aa15.43■□□□□ 0.06
HDAC4-216ENST00000544989 SERPINB2P05120 415 aa15.43■□□□□ 0.06
HDAC4-216ENST00000544989 YBX3P16989 372 aaKnown RBP eCLIP15.43■□□□□ 0.06
HDAC4-216ENST00000544989 RRP7AQ9Y3A4 280 aaKnown RBP15.43■□□□□ 0.06
HDAC4-216ENST00000544989 CARMIL3Q8ND23 1372 aa15.43■□□□□ 0.06
HDAC4-216ENST00000544989 ADCY9O60503 1353 aa15.42■□□□□ 0.06
HDAC4-216ENST00000544989 SETDB2Q96T68 719 aa15.42■□□□□ 0.06
HDAC4-216ENST00000544989 TRIM35Q9UPQ4 493 aa15.42■□□□□ 0.06
HDAC4-216ENST00000544989 PCNTO95613 3336 aa15.42■□□□□ 0.06
HDAC4-216ENST00000544989 LAMB4A4D0S4 1761 aa15.41■□□□□ 0.06
HDAC4-216ENST00000544989 SCN7AQ01118 1682 aa15.41■□□□□ 0.06
HDAC4-216ENST00000544989 CHL1O00533 1208 aa15.41■□□□□ 0.06
HDAC4-216ENST00000544989 PIM2Q9P1W9 311 aa15.41■□□□□ 0.06
HDAC4-216ENST00000544989 A0A0G2JLW4 131 aa15.4■□□□□ 0.06
HDAC4-216ENST00000544989 NBPF26B4DH59 902 aa15.4■□□□□ 0.06
HDAC4-216ENST00000544989 APAF1O14727 1248 aa15.4■□□□□ 0.06
HDAC4-216ENST00000544989 HOXB7P09629 217 aa15.4■□□□□ 0.06
HDAC4-216ENST00000544989 DPEP1P16444 411 aa15.4■□□□□ 0.06
HDAC4-216ENST00000544989 HSPA6P17066 643 aa15.4■□□□□ 0.06
HDAC4-216ENST00000544989 TBC1D9BQ66K14 1250 aa15.4■□□□□ 0.06
HDAC4-216ENST00000544989 NBPF10Q6P3W6 841 aaKnown RBP15.4■□□□□ 0.06
HDAC4-216ENST00000544989 BICDL1Q6ZP65 573 aa15.4■□□□□ 0.06
HDAC4-216ENST00000544989 NBPF15Q8N660 670 aa15.4■□□□□ 0.06
HDAC4-216ENST00000544989 CFAP44Q96MT7 982 aa15.4■□□□□ 0.06
HDAC4-216ENST00000544989 MRS2Q9HD23 443 aa15.4■□□□□ 0.06
HDAC4-216ENST00000544989 ERVV-1B6SEH8 477 aa15.39■□□□□ 0.05
HDAC4-216ENST00000544989 NPHP1O15259 732 aa15.39■□□□□ 0.05
HDAC4-216ENST00000544989 NCBP3Q53F19 620 aaKnown RBP15.39■□□□□ 0.05
HDAC4-216ENST00000544989 KIF6Q6ZMV9 814 aa15.39■□□□□ 0.05
HDAC4-216ENST00000544989 CHMP4AQ9BY43 222 aa15.39■□□□□ 0.05
HDAC4-216ENST00000544989 ATP10DQ9P241 1426 aa15.39■□□□□ 0.05
HDAC4-216ENST00000544989 NRXN2Q9P2S2 1712 aa15.38■□□□□ 0.05
HDAC4-216ENST00000544989 PDE6BP35913 854 aa15.38■□□□□ 0.05
HDAC4-216ENST00000544989 PIP4K2AP48426 406 aaPredicted RBP15.38■□□□□ 0.05
HDAC4-216ENST00000544989 ST5P78524 1137 aa15.38■□□□□ 0.05
HDAC4-216ENST00000544989 DALRD3Q5D0E6 543 aaKnown RBP15.38■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms