RNA–Protein interactions for RNA: ENST00000544800.1

CIT-215, Transcript of citron rho-interacting serine/threonine kinase, humanhuman

TSL 4

Gene CIT, Length 564 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIT-215ENST00000544800 PKN2Q16513 984 aaKnown RBP10.21□□□□□ -0.77
CIT-215ENST00000544800 MPRIPQ6WCQ1 1025 aa10.21□□□□□ -0.77
CIT-215ENST00000544800 TTLL6Q8N841 843 aa10.21□□□□□ -0.77
CIT-215ENST00000544800 HACL1Q9UJ83 578 aa10.21□□□□□ -0.77
CIT-215ENST00000544800 ADGRB1O14514 1584 aa10.2□□□□□ -0.78
CIT-215ENST00000544800 EPHX2P34913 555 aa10.2□□□□□ -0.78
CIT-215ENST00000544800 CST9Q5W186 159 aa10.2□□□□□ -0.78
CIT-215ENST00000544800 ARHGEF1Q92888 912 aaKnown RBP10.2□□□□□ -0.78
CIT-215ENST00000544800 HHIPL1Q96JK4 782 aa10.2□□□□□ -0.78
CIT-215ENST00000544800 CABP2Q9NPB3 220 aa10.2□□□□□ -0.78
CIT-215ENST00000544800 SAGE1Q9NXZ1 904 aa10.2□□□□□ -0.78
CIT-215ENST00000544800 RTCBQ9Y3I0 505 aaKnown RBP10.2□□□□□ -0.78
CIT-215ENST00000544800 LOC102724428A0A0B4J2F2 783 aa10.19□□□□□ -0.78
CIT-215ENST00000544800 RFC4P35249 363 aa10.19□□□□□ -0.78
CIT-215ENST00000544800 SIK1P57059 783 aa10.19□□□□□ -0.78
CIT-215ENST00000544800 AKAP4Q5JQC9 854 aa10.19□□□□□ -0.78
CIT-215ENST00000544800 MKI67P46013 3256 aaKnown RBP10.18□□□□□ -0.78
CIT-215ENST00000544800 ITGAEP38570 1179 aa10.18□□□□□ -0.78
CIT-215ENST00000544800 SAPCD2Q86UD0 394 aa10.18□□□□□ -0.78
CIT-215ENST00000544800 SCN4AP35499 1836 aa10.18□□□□□ -0.78
CIT-215ENST00000544800 NOGQ13253 232 aa10.17□□□□□ -0.78
CIT-215ENST00000544800 CABP1Q9NZU7 370 aa10.17□□□□□ -0.78
CIT-215ENST00000544800 NFAT5O94916 1531 aa10.17□□□□□ -0.78
CIT-215ENST00000544800 CCDC88AQ3V6T2 1871 aa10.17□□□□□ -0.78
CIT-215ENST00000544800 CEP290O15078 2479 aa10.16□□□□□ -0.78
CIT-215ENST00000544800 SRPK2P78362 688 aaKnown RBP10.16□□□□□ -0.78
CIT-215ENST00000544800 FMR1Q06787 632 aaKnown RBP eCLIP10.16□□□□□ -0.78
CIT-215ENST00000544800 TTC21BQ7Z4L5 1316 aa10.15□□□□□ -0.78
CIT-215ENST00000544800 LTBP3Q9NS15 1303 aa10.15□□□□□ -0.78
CIT-215ENST00000544800 COL9A1P20849 921 aa10.15□□□□□ -0.78
CIT-215ENST00000544800 ATP6V1AP38606 617 aa10.15□□□□□ -0.78
CIT-215ENST00000544800 DDR1Q08345 913 aa10.15□□□□□ -0.78
CIT-215ENST00000544800 ITPK1Q13572 414 aa10.15□□□□□ -0.78
CIT-215ENST00000544800 OTUD5Q96G74 571 aa10.15□□□□□ -0.78
CIT-215ENST00000544800 ADAMTSL1Q8N6G6 1762 aa10.14□□□□□ -0.79
CIT-215ENST00000544800 CACNA1AO00555 2505 aa10.14□□□□□ -0.79
CIT-215ENST00000544800 TTC21AQ8NDW8 1320 aa10.13□□□□□ -0.79
CIT-215ENST00000544800 TRPA1O75762 1119 aa10.13□□□□□ -0.79
CIT-215ENST00000544800 PLA2G5P39877 138 aa10.13□□□□□ -0.79
CIT-215ENST00000544800 PIGBQ92521 554 aa10.13□□□□□ -0.79
CIT-215ENST00000544800 TAOK3Q9H2K8 898 aa10.13□□□□□ -0.79
CIT-215ENST00000544800 INSRP06213 1382 aa10.13□□□□□ -0.79
CIT-215ENST00000544800 CGNL1Q0VF96 1302 aa10.12□□□□□ -0.79
CIT-215ENST00000544800 POLRMTO00411 1230 aaKnown RBP10.12□□□□□ -0.79
CIT-215ENST00000544800 RPS6KA4O75676 772 aa10.12□□□□□ -0.79
CIT-215ENST00000544800 RC3H1Q5TC82 1133 aaKnown RBP10.12□□□□□ -0.79
CIT-215ENST00000544800 ZIC5Q96T25 663 aa10.12□□□□□ -0.79
CIT-215ENST00000544800 RNF186Q9NXI6 227 aa10.12□□□□□ -0.79
CIT-215ENST00000544800 DICER1Q9UPY3 1922 aaKnown RBP10.11□□□□□ -0.79
CIT-215ENST00000544800 UNC80Q8N2C7 3258 aa10.11□□□□□ -0.79
CIT-215ENST00000544800 H0YIN7 160 aa10.11□□□□□ -0.79
CIT-215ENST00000544800 TRAF5O00463 557 aa10.11□□□□□ -0.79
CIT-215ENST00000544800 C21orf2O43822 256 aa10.11□□□□□ -0.79
CIT-215ENST00000544800 PRR29P0C7W0 189 aa10.11□□□□□ -0.79
CIT-215ENST00000544800 FKBP8Q14318 412 aa10.11□□□□□ -0.79
CIT-215ENST00000544800 FAM122AQ96E09 287 aa10.11□□□□□ -0.79
CIT-215ENST00000544800 SMG6Q86US8 1419 aaKnown RBP10.1□□□□□ -0.79
CIT-215ENST00000544800 TM4SF1P30408 202 aa10.1□□□□□ -0.79
CIT-215ENST00000544800 FBXO46Q6PJ61 603 aaPredicted RBP10.1□□□□□ -0.79
CIT-215ENST00000544800 C2CD5Q86YS7 1000 aa10.1□□□□□ -0.79
CIT-215ENST00000544800 HDAC9Q9UKV0 1011 aa10.1□□□□□ -0.79
CIT-215ENST00000544800 RANBP2P49792 3224 aaKnown RBP10.1□□□□□ -0.79
CIT-215ENST00000544800 RNF123Q5XPI4 1314 aa10.09□□□□□ -0.79
CIT-215ENST00000544800 CELF2O95319 508 aaKnown RBP10.09□□□□□ -0.79
CIT-215ENST00000544800 BICDL1Q6ZP65 573 aa10.09□□□□□ -0.79
CIT-215ENST00000544800 IP6K1Q92551 441 aa10.09□□□□□ -0.79
CIT-215ENST00000544800 LTV1Q96GA3 475 aaPredicted RBP10.09□□□□□ -0.79
CIT-215ENST00000544800 H0YGN5 161 aa10.08□□□□□ -0.8
CIT-215ENST00000544800 INTS3Q68E01 1043 aaKnown RBP10.08□□□□□ -0.8
CIT-215ENST00000544800 ANKRD13DQ6ZTN6 518 aa10.08□□□□□ -0.8
CIT-215ENST00000544800 RBM27Q9P2N5 1060 aaKnown RBP10.08□□□□□ -0.8
CIT-215ENST00000544800 PCDH11XQ9BZA7 1347 aa10.07□□□□□ -0.8
CIT-215ENST00000544800 PCDH11YQ9BZA8 1340 aa10.07□□□□□ -0.8
CIT-215ENST00000544800 USP31Q70CQ4 1352 aa10.07□□□□□ -0.8
CIT-215ENST00000544800 POTEFA5A3E0 1075 aa10.07□□□□□ -0.8
CIT-215ENST00000544800 SRP68Q9UHB9 627 aaKnown RBP10.07□□□□□ -0.8
CIT-215ENST00000544800 MAP3K19Q56UN5 1328 aa10.07□□□□□ -0.8
CIT-215ENST00000544800 ZNF541Q9H0D2 1346 aa10.07□□□□□ -0.8
CIT-215ENST00000544800 MAP2P11137 1827 aaKnown RBP10.06□□□□□ -0.8
CIT-215ENST00000544800 C19orf67A6NJJ6 358 aa10.06□□□□□ -0.8
CIT-215ENST00000544800 GPC2Q8N158 579 aa10.06□□□□□ -0.8
CIT-215ENST00000544800 SYNE4Q8N205 404 aa10.06□□□□□ -0.8
CIT-215ENST00000544800 RAPGEF4Q8WZA2 1011 aa10.06□□□□□ -0.8
CIT-215ENST00000544800 SNX27Q96L92 541 aa10.06□□□□□ -0.8
CIT-215ENST00000544800 ASAP1Q9ULH1 1129 aa10.06□□□□□ -0.8
CIT-215ENST00000544800 CNTNAP4Q9C0A0 1308 aa10.06□□□□□ -0.8
CIT-215ENST00000544800 USP42Q9H9J4 1324 aaKnown RBP10.06□□□□□ -0.8
CIT-215ENST00000544800 CD163L1Q9NR16 1453 aa10.05□□□□□ -0.8
CIT-215ENST00000544800 KIF23Q02241 960 aaPredicted RBP10.05□□□□□ -0.8
CIT-215ENST00000544800 SOGA3Q5TF21 947 aa10.05□□□□□ -0.8
CIT-215ENST00000544800 PHF6Q8IWS0 365 aaKnown RBP eCLIP10.05□□□□□ -0.8
CIT-215ENST00000544800 ZNF622Q969S3 477 aaKnown RBP eCLIP10.05□□□□□ -0.8
CIT-215ENST00000544800 STXBP5LQ9Y2K9 1186 aa10.05□□□□□ -0.8
CIT-215ENST00000544800 TRPM7Q96QT4 1865 aa10.04□□□□□ -0.8
CIT-215ENST00000544800 CYP27B1O15528 508 aa10.04□□□□□ -0.8
CIT-215ENST00000544800 TATP17735 454 aaPredicted RBP10.04□□□□□ -0.8
CIT-215ENST00000544800 USP50Q70EL3 339 aaPredicted RBP10.04□□□□□ -0.8
CIT-215ENST00000544800 CCDC102AQ96A19 550 aa10.04□□□□□ -0.8
CIT-215ENST00000544800 PDZRN3Q9UPQ7 1066 aa10.04□□□□□ -0.8
CIT-215ENST00000544800 VCANP13611 3396 aa10.04□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms