RNA–Protein interactions for RNA: ENST00000544610.1

CDCA3-209, Transcript of cell division cycle associated 3, humanhuman

TSL 3

Gene CDCA3, Length 624 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDCA3-209ENST00000544610 TMOD3Q9NYL9 352 aa8.88□□□□□ -0.99
CDCA3-209ENST00000544610 CIZ1Q9ULV3 898 aaPredicted RBP8.88□□□□□ -0.99
CDCA3-209ENST00000544610 KNSTRNQ9Y448 316 aa8.88□□□□□ -0.99
CDCA3-209ENST00000544610 KDRP35968 1356 aa8.87□□□□□ -0.99
CDCA3-209ENST00000544610 ITPK1Q13572 414 aa8.87□□□□□ -0.99
CDCA3-209ENST00000544610 IFNL2Q8IZJ0 200 aa8.87□□□□□ -0.99
CDCA3-209ENST00000544610 PRKRIP1Q9H875 184 aaPredicted RBP8.87□□□□□ -0.99
CDCA3-209ENST00000544610 POLKQ9UBT6 870 aa8.87□□□□□ -0.99
CDCA3-209ENST00000544610 ASAP1Q9ULH1 1129 aa8.87□□□□□ -0.99
CDCA3-209ENST00000544610 ZNF831Q5JPB2 1677 aa8.87□□□□□ -0.99
CDCA3-209ENST00000544610 GNPATO15228 680 aa8.86□□□□□ -0.99
CDCA3-209ENST00000544610 POTEJP0CG39 1038 aa8.86□□□□□ -0.99
CDCA3-209ENST00000544610 ATP6V1AP38606 617 aa8.86□□□□□ -0.99
CDCA3-209ENST00000544610 EIF4A2Q14240 407 aaKnown RBP8.86□□□□□ -0.99
CDCA3-209ENST00000544610 GPBP1L1Q9HC44 474 aaPredicted RBP8.86□□□□□ -0.99
CDCA3-209ENST00000544610 ATG3Q9NT62 314 aa8.86□□□□□ -0.99
CDCA3-209ENST00000544610 KIAA1551Q9HCM1 1747 aa8.85□□□□□ -0.99
CDCA3-209ENST00000544610 PXDNLA1KZ92 1463 aa8.85□□□□□ -0.99
CDCA3-209ENST00000544610 MMRN1Q13201 1228 aa8.85□□□□□ -0.99
CDCA3-209ENST00000544610 METRNQ9UJH8 293 aa8.85□□□□□ -0.99
CDCA3-209ENST00000544610 KIF13BQ9NQT8 1826 aa8.84□□□□□ -0.99
CDCA3-209ENST00000544610 COL5A3P25940 1745 aaPredicted RBP8.84□□□□□ -0.99
CDCA3-209ENST00000544610 C10orf71Q711Q0 1435 aa8.84□□□□□ -0.99
CDCA3-209ENST00000544610 WWC3Q9ULE0 1092 aa8.84□□□□□ -0.99
CDCA3-209ENST00000544610 KDM6AO15550 1401 aaPredicted RBP8.83□□□□□ -1
CDCA3-209ENST00000544610 ERVV-2B6SEH9 535 aa8.83□□□□□ -1
CDCA3-209ENST00000544610 MMP10P09238 476 aa8.83□□□□□ -1
CDCA3-209ENST00000544610 C7P10643 843 aa8.83□□□□□ -1
CDCA3-209ENST00000544610 HSPA6P17066 643 aa8.83□□□□□ -1
CDCA3-209ENST00000544610 ZNF526Q8TF50 670 aaPredicted RBP8.83□□□□□ -1
CDCA3-209ENST00000544610 DCAF5Q96JK2 942 aa8.83□□□□□ -1
CDCA3-209ENST00000544610 SLC4A9Q96Q91 983 aa8.83□□□□□ -1
CDCA3-209ENST00000544610 C4AP0C0L4 1744 aa8.83□□□□□ -1
CDCA3-209ENST00000544610 MYBBP1AQ9BQG0 1328 aaKnown RBP8.82□□□□□ -1
CDCA3-209ENST00000544610 CNTNAP4Q9C0A0 1308 aa8.82□□□□□ -1
CDCA3-209ENST00000544610 HSP90AB1P08238 724 aaKnown RBP8.82□□□□□ -1
CDCA3-209ENST00000544610 TNNT2P45379 298 aaPredicted RBP8.82□□□□□ -1
CDCA3-209ENST00000544610 TGFB2P61812 414 aa8.82□□□□□ -1
CDCA3-209ENST00000544610 TRAPPC3LQ5T215 181 aa8.82□□□□□ -1
CDCA3-209ENST00000544610 RC3H1Q5TC82 1133 aaKnown RBP8.82□□□□□ -1
CDCA3-209ENST00000544610 IFFO2Q5TF58 517 aa8.82□□□□□ -1
CDCA3-209ENST00000544610 NLGN1Q8N2Q7 840 aa8.82□□□□□ -1
CDCA3-209ENST00000544610 POLR3GLQ9BT43 218 aa8.82□□□□□ -1
CDCA3-209ENST00000544610 RTCBQ9Y3I0 505 aaKnown RBP8.82□□□□□ -1
CDCA3-209ENST00000544610 KIF3CO14782 793 aa8.81□□□□□ -1
CDCA3-209ENST00000544610 GYS1P13807 737 aa8.81□□□□□ -1
CDCA3-209ENST00000544610 SLC39A7Q92504 469 aa8.81□□□□□ -1
CDCA3-209ENST00000544610 ARHGEF1Q92888 912 aaKnown RBP8.81□□□□□ -1
CDCA3-209ENST00000544610 AMOTQ4VCS5 1084 aa8.8□□□□□ -1
CDCA3-209ENST00000544610 PLEKHO1Q53GL0 409 aaPredicted RBP8.8□□□□□ -1
CDCA3-209ENST00000544610 ZNF530Q6P9A1 599 aaPredicted RBP8.8□□□□□ -1
CDCA3-209ENST00000544610 ZBTB47Q9UFB7 747 aaPredicted RBP8.8□□□□□ -1
CDCA3-209ENST00000544610 N4BP2Q86UW6 1770 aaPredicted RBP8.8□□□□□ -1
CDCA3-209ENST00000544610 TJP1Q07157 1748 aa8.8□□□□□ -1
CDCA3-209ENST00000544610 A0A0G2JLW4 131 aa8.79□□□□□ -1
CDCA3-209ENST00000544610 RPS6KA4O75676 772 aa8.79□□□□□ -1
CDCA3-209ENST00000544610 CABP4P57796 275 aa8.79□□□□□ -1
CDCA3-209ENST00000544610 CCDC87Q9NVE4 849 aa8.79□□□□□ -1
CDCA3-209ENST00000544610 BCS1LQ9Y276 419 aa8.79□□□□□ -1
CDCA3-209ENST00000544610 BRCA1P38398 1863 aaKnown RBP8.79□□□□□ -1
CDCA3-209ENST00000544610 DPEP1P16444 411 aa8.78□□□□□ -1
CDCA3-209ENST00000544610 RFC4P35249 363 aa8.78□□□□□ -1
CDCA3-209ENST00000544610 MTHFSP49914 203 aa8.78□□□□□ -1
CDCA3-209ENST00000544610 AEBP1Q8IUX7 1158 aa8.78□□□□□ -1
CDCA3-209ENST00000544610 PARP3Q9Y6F1 533 aa8.78□□□□□ -1
CDCA3-209ENST00000544610 ADAMTS7Q9UKP4 1686 aa8.78□□□□□ -1
CDCA3-209ENST00000544610 MRC1P22897 1456 aa8.77□□□□□ -1
CDCA3-209ENST00000544610 PTCD1O75127 700 aaKnown RBP8.77□□□□□ -1.01
CDCA3-209ENST00000544610 KCNA3P22001 575 aa8.77□□□□□ -1.01
CDCA3-209ENST00000544610 CRKLP46109 303 aaKnown RBP8.77□□□□□ -1.01
CDCA3-209ENST00000544610 C1orf141Q5JVX7 400 aa8.77□□□□□ -1.01
CDCA3-209ENST00000544610 HS6ST3Q8IZP7 471 aa8.77□□□□□ -1.01
CDCA3-209ENST00000544610 USP42Q9H9J4 1324 aaKnown RBP8.77□□□□□ -1.01
CDCA3-209ENST00000544610 ARFGEF1Q9Y6D6 1849 aa8.76□□□□□ -1.01
CDCA3-209ENST00000544610 MYH14Q7Z406 1995 aaKnown RBP8.76□□□□□ -1.01
CDCA3-209ENST00000544610 TOMM70O94826 608 aa8.76□□□□□ -1.01
CDCA3-209ENST00000544610 FCHSD2O94868 740 aa8.76□□□□□ -1.01
CDCA3-209ENST00000544610 SULT6B1Q6IMI4 303 aa8.76□□□□□ -1.01
CDCA3-209ENST00000544610 ARHGAP27Q6ZUM4 889 aa8.76□□□□□ -1.01
CDCA3-209ENST00000544610 MORC1Q86VD1 984 aa8.76□□□□□ -1.01
CDCA3-209ENST00000544610 SPNS2Q8IVW8 549 aa8.76□□□□□ -1.01
CDCA3-209ENST00000544610 NFATC2IPQ8NCF5 419 aa8.76□□□□□ -1.01
CDCA3-209ENST00000544610 SCN11AQ9UI33 1791 aa8.76□□□□□ -1.01
CDCA3-209ENST00000544610 IL13P35225 146 aa8.75□□□□□ -1.01
CDCA3-209ENST00000544610 APLP1P51693 650 aa8.75□□□□□ -1.01
CDCA3-209ENST00000544610 DDR1Q08345 913 aa8.75□□□□□ -1.01
CDCA3-209ENST00000544610 NMRK2Q9NPI5 230 aa8.75□□□□□ -1.01
CDCA3-209ENST00000544610 SRP68Q9UHB9 627 aaKnown RBP8.75□□□□□ -1.01
CDCA3-209ENST00000544610 POLRMTO00411 1230 aaKnown RBP8.74□□□□□ -1.01
CDCA3-209ENST00000544610 PPP2R1AP30153 589 aa8.74□□□□□ -1.01
CDCA3-209ENST00000544610 DALRD3Q5D0E6 543 aaKnown RBP8.74□□□□□ -1.01
CDCA3-209ENST00000544610 AKAP4Q5JQC9 854 aa8.74□□□□□ -1.01
CDCA3-209ENST00000544610 C9orf131Q5VYM1 1079 aa8.74□□□□□ -1.01
CDCA3-209ENST00000544610 INTS5Q6P9B9 1019 aaKnown RBP8.74□□□□□ -1.01
CDCA3-209ENST00000544610 NGEFQ8N5V2 710 aa8.74□□□□□ -1.01
CDCA3-209ENST00000544610 PIM2Q9P1W9 311 aa8.74□□□□□ -1.01
CDCA3-209ENST00000544610 KCPQ6ZWJ8 1503 aa8.74□□□□□ -1.01
CDCA3-209ENST00000544610 TULP1O00294 542 aaPredicted RBP8.73□□□□□ -1.01
CDCA3-209ENST00000544610 TM4SF1P30408 202 aa8.73□□□□□ -1.01
CDCA3-209ENST00000544610 CC2D1BQ5T0F9 858 aaKnown RBP8.73□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 302.8 ms