RNA–Protein interactions for RNA: ENST00000544588.1

CIT-214, Transcript of citron rho-interacting serine/threonine kinase, humanhuman

TSL 4

Gene CIT, Length 594 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIT-214ENST00000544588 MYBBP1AQ9BQG0 1328 aaKnown RBP17.4■□□□□ 0.38
CIT-214ENST00000544588 A0A087WZG4 1122 aa17.39■□□□□ 0.37
CIT-214ENST00000544588 A1BGP04217 495 aa17.39■□□□□ 0.37
CIT-214ENST00000544588 TGFB2P61812 414 aa17.39■□□□□ 0.37
CIT-214ENST00000544588 TAF1LQ8IZX4 1826 aa17.38■□□□□ 0.37
CIT-214ENST00000544588 SNRPA1P09661 255 aaKnown RBP17.38■□□□□ 0.37
CIT-214ENST00000544588 BICDL1Q6ZP65 573 aa17.38■□□□□ 0.37
CIT-214ENST00000544588 THUMPD2Q9BTF0 503 aaKnown RBP17.38■□□□□ 0.37
CIT-214ENST00000544588 TBC1D2BQ9UPU7 963 aa17.38■□□□□ 0.37
CIT-214ENST00000544588 USP16Q9Y5T5 823 aa17.38■□□□□ 0.37
CIT-214ENST00000544588 COL15A1P39059 1388 aa17.38■□□□□ 0.37
CIT-214ENST00000544588 KCPQ6ZWJ8 1503 aa17.37■□□□□ 0.37
CIT-214ENST00000544588 DPEP1P16444 411 aa17.37■□□□□ 0.37
CIT-214ENST00000544588 EIF5P55010 431 aaKnown RBP17.37■□□□□ 0.37
CIT-214ENST00000544588 DDR1Q08345 913 aa17.37■□□□□ 0.37
CIT-214ENST00000544588 WDR43Q15061 677 aaKnown RBP eCLIP17.37■□□□□ 0.37
CIT-214ENST00000544588 ZNF784Q8NCA9 323 aaPredicted RBP17.37■□□□□ 0.37
CIT-214ENST00000544588 BCS1LQ9Y276 419 aa17.37■□□□□ 0.37
CIT-214ENST00000544588 PRAMEF22A3QJZ6 481 aa17.36■□□□□ 0.37
CIT-214ENST00000544588 TM4SF1P30408 202 aa17.36■□□□□ 0.37
CIT-214ENST00000544588 PIP4K2AP48426 406 aaPredicted RBP17.36■□□□□ 0.37
CIT-214ENST00000544588 RIPK4P57078 832 aa17.36■□□□□ 0.37
CIT-214ENST00000544588 NFIXQ14938 502 aa17.36■□□□□ 0.37
CIT-214ENST00000544588 CCDC146Q8IYE0 955 aa17.36■□□□□ 0.37
CIT-214ENST00000544588 PNISRQ8TF01 805 aaKnown RBP17.36■□□□□ 0.37
CIT-214ENST00000544588 UBR3Q6ZT12 1888 aa17.35■□□□□ 0.37
CIT-214ENST00000544588 POLRMTO00411 1230 aaKnown RBP17.35■□□□□ 0.37
CIT-214ENST00000544588 IL6STP40189 918 aaPredicted RBP17.35■□□□□ 0.37
CIT-214ENST00000544588 NEUROD2Q15784 382 aa17.35■□□□□ 0.37
CIT-214ENST00000544588 PRKRIP1Q9H875 184 aaPredicted RBP17.34■□□□□ 0.37
CIT-214ENST00000544588 BCL2L12Q9HB09 334 aa17.34■□□□□ 0.37
CIT-214ENST00000544588 SCN11AQ9UI33 1791 aa17.34■□□□□ 0.37
CIT-214ENST00000544588 RRP7AQ9Y3A4 280 aaKnown RBP17.34■□□□□ 0.37
CIT-214ENST00000544588 SERPINB2P05120 415 aa17.33■□□□□ 0.36
CIT-214ENST00000544588 NPHP1O15259 732 aa17.32■□□□□ 0.36
CIT-214ENST00000544588 DZIP3Q86Y13 1208 aaKnown RBP17.32■□□□□ 0.36
CIT-214ENST00000544588 CHRNA5P30532 468 aa17.31■□□□□ 0.36
CIT-214ENST00000544588 TMPOP42166 694 aaKnown RBP17.31■□□□□ 0.36
CIT-214ENST00000544588 TBC1D9BQ66K14 1250 aa17.31■□□□□ 0.36
CIT-214ENST00000544588 ARHGAP27Q6ZUM4 889 aa17.31■□□□□ 0.36
CIT-214ENST00000544588 NGEFQ8N5V2 710 aa17.31■□□□□ 0.36
CIT-214ENST00000544588 PIM2Q9P1W9 311 aa17.31■□□□□ 0.36
CIT-214ENST00000544588 ZNF831Q5JPB2 1677 aa17.31■□□□□ 0.36
CIT-214ENST00000544588 CICQ96RK0 1608 aaPredicted RBP17.31■□□□□ 0.36
CIT-214ENST00000544588 LMOD3Q0VAK6 560 aa17.3■□□□□ 0.36
CIT-214ENST00000544588 TSPYL4Q9UJ04 414 aa17.3■□□□□ 0.36
CIT-214ENST00000544588 ADAMTS8Q9UP79 889 aa17.3■□□□□ 0.36
CIT-214ENST00000544588 COL24A1Q17RW2 1714 aa17.3■□□□□ 0.36
CIT-214ENST00000544588 C10orf71Q711Q0 1435 aa17.3■□□□□ 0.36
CIT-214ENST00000544588 DALRD3Q5D0E6 543 aaKnown RBP17.29■□□□□ 0.36
CIT-214ENST00000544588 RUNDC1Q96C34 613 aa17.29■□□□□ 0.36
CIT-214ENST00000544588 SETDB2Q96T68 719 aa17.29■□□□□ 0.36
CIT-214ENST00000544588 PXDNLA1KZ92 1463 aa17.29■□□□□ 0.36
CIT-214ENST00000544588 ADAMTS7Q9UKP4 1686 aa17.29■□□□□ 0.36
CIT-214ENST00000544588 MYH14Q7Z406 1995 aaKnown RBP17.28■□□□□ 0.36
CIT-214ENST00000544588 TJP1Q07157 1748 aa17.28■□□□□ 0.36
CIT-214ENST00000544588 KCNA3P22001 575 aa17.28■□□□□ 0.36
CIT-214ENST00000544588 EIF4A1P60842 406 aaKnown RBP17.28■□□□□ 0.36
CIT-214ENST00000544588 CCDC24Q8N4L8 307 aa17.28■□□□□ 0.36
CIT-214ENST00000544588 LAS1LQ9Y4W2 734 aaKnown RBP17.28■□□□□ 0.36
CIT-214ENST00000544588 ZNF316A6NFI3 1004 aaPredicted RBP17.27■□□□□ 0.36
CIT-214ENST00000544588 NBPF26B4DH59 902 aa17.27■□□□□ 0.36
CIT-214ENST00000544588 GIGYF1O75420 1035 aaPredicted RBP17.27■□□□□ 0.36
CIT-214ENST00000544588 CAMTA2O94983 1202 aa17.27■□□□□ 0.36
CIT-214ENST00000544588 NBPF10Q6P3W6 841 aaKnown RBP17.27■□□□□ 0.36
CIT-214ENST00000544588 NBPF15Q8N660 670 aa17.27■□□□□ 0.36
CIT-214ENST00000544588 COL5A3P25940 1745 aaPredicted RBP17.27■□□□□ 0.35
CIT-214ENST00000544588 ZNF526Q8TF50 670 aaPredicted RBP17.26■□□□□ 0.35
CIT-214ENST00000544588 ZNF652Q9Y2D9 606 aa17.26■□□□□ 0.35
CIT-214ENST00000544588 H0YIN7 160 aa17.25■□□□□ 0.35
CIT-214ENST00000544588 EIF2S2P20042 333 aaKnown RBP17.25■□□□□ 0.35
CIT-214ENST00000544588 IFFO2Q5TF58 517 aa17.25■□□□□ 0.35
CIT-214ENST00000544588 C2CD5Q86YS7 1000 aa17.25■□□□□ 0.35
CIT-214ENST00000544588 MYL6BP14649 208 aa17.24■□□□□ 0.35
CIT-214ENST00000544588 CEP350Q5VT06 3117 aa17.23■□□□□ 0.35
CIT-214ENST00000544588 FAM177BA6PVY3 158 aa17.23■□□□□ 0.35
CIT-214ENST00000544588 CNBD1Q8NA66 436 aa17.23■□□□□ 0.35
CIT-214ENST00000544588 ZNF622Q969S3 477 aaKnown RBP eCLIP17.23■□□□□ 0.35
CIT-214ENST00000544588 GOLGB1Q14789 3259 aaKnown RBP17.23■□□□□ 0.35
CIT-214ENST00000544588 PDE6BP35913 854 aa17.22■□□□□ 0.35
CIT-214ENST00000544588 ST5P78524 1137 aa17.22■□□□□ 0.35
CIT-214ENST00000544588 PRR5LQ6MZQ0 368 aa17.22■□□□□ 0.35
CIT-214ENST00000544588 CLEC4GQ6UXB4 293 aa17.22■□□□□ 0.35
CIT-214ENST00000544588 NBPF5PQ86XG9 351 aaPredicted RBP17.22■□□□□ 0.35
CIT-214ENST00000544588 NIP7Q9Y221 180 aaKnown RBP eCLIP17.22■□□□□ 0.35
CIT-214ENST00000544588 C4AP0C0L4 1744 aa17.21■□□□□ 0.35
CIT-214ENST00000544588 CARMIL3Q8ND23 1372 aa17.21■□□□□ 0.35
CIT-214ENST00000544588 KIF6Q6ZMV9 814 aa17.21■□□□□ 0.35
CIT-214ENST00000544588 TTLL6Q8N841 843 aa17.21■□□□□ 0.35
CIT-214ENST00000544588 NECTIN2Q92692 538 aa17.21■□□□□ 0.35
CIT-214ENST00000544588 BRIP1Q9BX63 1249 aa17.21■□□□□ 0.35
CIT-214ENST00000544588 GPBP1L1Q9HC44 474 aaPredicted RBP17.21■□□□□ 0.35
CIT-214ENST00000544588 APAF1O14727 1248 aa17.2■□□□□ 0.34
CIT-214ENST00000544588 ANP32CO43423 234 aa17.2■□□□□ 0.34
CIT-214ENST00000544588 GTF2E1P29083 439 aaPredicted RBP17.2■□□□□ 0.34
CIT-214ENST00000544588 HLFQ16534 295 aa17.2■□□□□ 0.34
CIT-214ENST00000544588 BABAM1Q9NWV8 329 aa17.2■□□□□ 0.34
CIT-214ENST00000544588 TRIM35Q9UPQ4 493 aa17.2■□□□□ 0.34
CIT-214ENST00000544588 ATP10DQ9P241 1426 aa17.2■□□□□ 0.34
CIT-214ENST00000544588 ZNF219Q9P2Y4 722 aaPredicted RBP17.19■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms