RNA–Protein interactions for RNA: ENST00000544474.5

PDZD4-209, Transcript of PDZ domain containing 4, humanhuman

TSL 1 (best) BASIC

Gene PDZD4, Length 3,418 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDZD4-209ENST00000544474 YEATS2Q9ULM3 1422 aa15.28■□□□□ 0.04
PDZD4-209ENST00000544474 CWC27Q6UX04 472 aaKnown RBP15.28■□□□□ 0.04
PDZD4-209ENST00000544474 RPAP2Q8IXW5 612 aaPredicted RBP15.28■□□□□ 0.04
PDZD4-209ENST00000544474 CCDC112Q8NEF3 446 aa15.28■□□□□ 0.04
PDZD4-209ENST00000544474 SRCIN1Q9C0H9 1055 aa15.28■□□□□ 0.04
PDZD4-209ENST00000544474 CCAR2Q8N163 923 aaKnown RBP15.27■□□□□ 0.04
PDZD4-209ENST00000544474 BICD2Q8TD16 824 aa15.27■□□□□ 0.04
PDZD4-209ENST00000544474 KDM4AO75164 1064 aa15.27■□□□□ 0.04
PDZD4-209ENST00000544474 ADGRB1O14514 1584 aa15.27■□□□□ 0.03
PDZD4-209ENST00000544474 GTF3C6Q969F1 213 aa15.27■□□□□ 0.03
PDZD4-209ENST00000544474 UHRF1BP1LA0JNW5 1464 aa15.27■□□□□ 0.03
PDZD4-209ENST00000544474 ANKRD44Q8N8A2 993 aa15.26■□□□□ 0.03
PDZD4-209ENST00000544474 PPRC1Q5VV67 1664 aaKnown RBP15.26■□□□□ 0.03
PDZD4-209ENST00000544474 TULP2O00295 520 aa15.26■□□□□ 0.03
PDZD4-209ENST00000544474 RNF216Q9NWF9 866 aaPredicted RBP15.26■□□□□ 0.03
PDZD4-209ENST00000544474 GOLGA6L6A8MZA4 724 aa15.25■□□□□ 0.03
PDZD4-209ENST00000544474 ARAP3Q8WWN8 1544 aa15.25■□□□□ 0.03
PDZD4-209ENST00000544474 CFAP74Q9C0B2 1584 aa15.25■□□□□ 0.03
PDZD4-209ENST00000544474 INO80Q9ULG1 1556 aaPredicted RBP15.25■□□□□ 0.03
PDZD4-209ENST00000544474 CTNNA3Q9UI47 895 aa15.25■□□□□ 0.03
PDZD4-209ENST00000544474 COG3Q96JB2 828 aa15.24■□□□□ 0.03
PDZD4-209ENST00000544474 SLC52A1Q9NWF4 448 aa15.24■□□□□ 0.03
PDZD4-209ENST00000544474 DDX41Q9UJV9 622 aaKnown RBP15.24■□□□□ 0.03
PDZD4-209ENST00000544474 USP32Q8NFA0 1604 aa15.24■□□□□ 0.03
PDZD4-209ENST00000544474 CLGNO14967 610 aa15.24■□□□□ 0.03
PDZD4-209ENST00000544474 ARID5BQ14865 1188 aa15.24■□□□□ 0.03
PDZD4-209ENST00000544474 CCDC183Q5T5S1 534 aa15.24■□□□□ 0.03
PDZD4-209ENST00000544474 UNC5CLQ8IV45 518 aa15.24■□□□□ 0.03
PDZD4-209ENST00000544474 KRT222Q8N1A0 295 aa15.24■□□□□ 0.03
PDZD4-209ENST00000544474 SPTLC3Q9NUV7 552 aa15.24■□□□□ 0.03
PDZD4-209ENST00000544474 GLI2P10070 1586 aa15.24■□□□□ 0.03
PDZD4-209ENST00000544474 PTCH1Q13635 1447 aa15.24■□□□□ 0.03
PDZD4-209ENST00000544474 SULT6B1Q6IMI4 303 aa15.23■□□□□ 0.03
PDZD4-209ENST00000544474 CEP85Q6P2H3 762 aa15.23■□□□□ 0.03
PDZD4-209ENST00000544474 MED14O60244 1454 aa15.23■□□□□ 0.03
PDZD4-209ENST00000544474 FOXO3O43524 673 aa15.23■□□□□ 0.03
PDZD4-209ENST00000544474 CYP2E1P05181 493 aaPredicted RBP15.23■□□□□ 0.03
PDZD4-209ENST00000544474 EIF2S2P20042 333 aaKnown RBP15.22■□□□□ 0.03
PDZD4-209ENST00000544474 DDX11Q96FC9 970 aa15.22■□□□□ 0.03
PDZD4-209ENST00000544474 ZFYVE9O95405 1425 aa15.22■□□□□ 0.03
PDZD4-209ENST00000544474 MROH1Q8NDA8 1641 aa15.22■□□□□ 0.03
PDZD4-209ENST00000544474 CTIFO43310 598 aaKnown RBP15.22■□□□□ 0.03
PDZD4-209ENST00000544474 CASTP20810 708 aaKnown RBP15.22■□□□□ 0.03
PDZD4-209ENST00000544474 WDR33Q9C0J8 1336 aaKnown RBP15.22■□□□□ 0.03
PDZD4-209ENST00000544474 AP5Z1O43299 807 aa15.21■□□□□ 0.03
PDZD4-209ENST00000544474 PDE1AP54750 535 aa15.21■□□□□ 0.03
PDZD4-209ENST00000544474 GNL2Q13823 731 aaKnown RBP15.21■□□□□ 0.03
PDZD4-209ENST00000544474 STK11IPQ8N1F8 1099 aa15.21■□□□□ 0.03
PDZD4-209ENST00000544474 EFCC1Q9HA90 598 aa15.21■□□□□ 0.03
PDZD4-209ENST00000544474 MORC2Q9Y6X9 1032 aaPredicted RBP15.21■□□□□ 0.03
PDZD4-209ENST00000544474 PNPLA6Q8IY17 1366 aa15.21■□□□□ 0.03
PDZD4-209ENST00000544474 COL3A1P02461 1466 aaPredicted RBP15.21■□□□□ 0.03
PDZD4-209ENST00000544474 TRHP20396 242 aaPredicted RBP15.21■□□□□ 0.03
PDZD4-209ENST00000544474 FEZ2Q9UHY8 353 aaPredicted RBP15.21■□□□□ 0.03
PDZD4-209ENST00000544474 SURF6O75683 361 aaKnown RBP15.21■□□□□ 0.02
PDZD4-209ENST00000544474 ZNF853P0CG23 659 aa15.21■□□□□ 0.02
PDZD4-209ENST00000544474 HSP90B1P14625 803 aaKnown RBP15.21■□□□□ 0.02
PDZD4-209ENST00000544474 MCM2P49736 904 aa15.21■□□□□ 0.02
PDZD4-209ENST00000544474 NCBP1Q09161 790 aaKnown RBP15.21■□□□□ 0.02
PDZD4-209ENST00000544474 G2E3Q7L622 706 aa15.21■□□□□ 0.02
PDZD4-209ENST00000544474 YY1AP1Q9H869 796 aa15.21■□□□□ 0.02
PDZD4-209ENST00000544474 PIK3R4Q99570 1358 aa15.21■□□□□ 0.02
PDZD4-209ENST00000544474 FAM135BQ49AJ0 1406 aa15.21■□□□□ 0.02
PDZD4-209ENST00000544474 BECN2A8MW95 431 aa15.2■□□□□ 0.02
PDZD4-209ENST00000544474 BRD1O95696 1058 aa15.2■□□□□ 0.02
PDZD4-209ENST00000544474 SYT1P21579 422 aa15.2■□□□□ 0.02
PDZD4-209ENST00000544474 IL13P35225 146 aa15.2■□□□□ 0.02
PDZD4-209ENST00000544474 PTPN21Q16825 1174 aa15.2■□□□□ 0.02
PDZD4-209ENST00000544474 ISM2Q6H9L7 571 aa15.2■□□□□ 0.02
PDZD4-209ENST00000544474 USHBP1Q8N6Y0 703 aa15.2■□□□□ 0.02
PDZD4-209ENST00000544474 DNAJC25Q9H1X3 360 aa15.2■□□□□ 0.02
PDZD4-209ENST00000544474 GEMIN8Q9NWZ8 242 aaKnown RBP15.2■□□□□ 0.02
PDZD4-209ENST00000544474 IFT172Q9UG01 1749 aa15.2■□□□□ 0.02
PDZD4-209ENST00000544474 GOLGA6L19H0YKK7 550 aa15.2■□□□□ 0.02
PDZD4-209ENST00000544474 STX6O43752 255 aa15.19■□□□□ 0.02
PDZD4-209ENST00000544474 MX1P20591 662 aa15.19■□□□□ 0.02
PDZD4-209ENST00000544474 HOMER1Q86YM7 354 aa15.19■□□□□ 0.02
PDZD4-209ENST00000544474 TNMDQ9H2S6 317 aa15.19■□□□□ 0.02
PDZD4-209ENST00000544474 KCNF1Q9H3M0 494 aa15.19■□□□□ 0.02
PDZD4-209ENST00000544474 CCDC192P0DO97 292 aa15.19■□□□□ 0.02
PDZD4-209ENST00000544474 MMP14P50281 582 aa15.19■□□□□ 0.02
PDZD4-209ENST00000544474 ELF2Q15723 593 aa15.19■□□□□ 0.02
PDZD4-209ENST00000544474 ANO6Q4KMQ2 910 aa15.19■□□□□ 0.02
PDZD4-209ENST00000544474 HSP90AB2PQ58FF8 381 aa15.19■□□□□ 0.02
PDZD4-209ENST00000544474 LRRC7Q96NW7 1537 aa15.19■□□□□ 0.02
PDZD4-209ENST00000544474 JAKMIP1Q96N16 626 aaKnown RBP15.18■□□□□ 0.02
PDZD4-209ENST00000544474 YTHDC2Q9H6S0 1430 aaKnown RBP15.18■□□□□ 0.02
PDZD4-209ENST00000544474 GJB2P29033 226 aa15.18■□□□□ 0.02
PDZD4-209ENST00000544474 DACT1Q9NYF0 836 aa15.18■□□□□ 0.02
PDZD4-209ENST00000544474 MYCNP04198 464 aaPredicted RBP15.18■□□□□ 0.02
PDZD4-209ENST00000544474 CLIP2Q9UDT6 1046 aa15.18■□□□□ 0.02
PDZD4-209ENST00000544474 RSPH14Q9UHP6 348 aa15.18■□□□□ 0.02
PDZD4-209ENST00000544474 LMTK2Q8IWU2 1503 aa15.18■□□□□ 0.02
PDZD4-209ENST00000544474 GTF2A1P52655 376 aaPredicted RBP15.17■□□□□ 0.02
PDZD4-209ENST00000544474 LARP1BQ659C4 914 aaKnown RBP15.17■□□□□ 0.02
PDZD4-209ENST00000544474 PRPF40BQ6NWY9 871 aaKnown RBP15.17■□□□□ 0.02
PDZD4-209ENST00000544474 KIF18AQ8NI77 898 aa15.17■□□□□ 0.02
PDZD4-209ENST00000544474 NUDT16Q96DE0 195 aaKnown RBP15.17■□□□□ 0.02
PDZD4-209ENST00000544474 ESYT1Q9BSJ8 1104 aa15.17■□□□□ 0.02
PDZD4-209ENST00000544474 IL25Q9H293 177 aa15.17■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 11.7 ms