RNA–Protein interactions for RNA: ENST00000544050.1

DYRK4-215, Transcript of dual specificity tyrosine phosphorylation regulated kinase 4, human

TSL 2

Gene DYRK4, Length 514 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
DYRK4-215	ENST00000544050	KIF13B	Q9NQT8	1826 aa		13.66	□□□□□ -0.22
DYRK4-215	ENST00000544050	ATP10D	Q9P241	1426 aa		13.65	□□□□□ -0.22
DYRK4-215	ENST00000544050	DCAF5	Q96JK2	942 aa		13.65	□□□□□ -0.22
DYRK4-215	ENST00000544050	BABAM1	Q9NWV8	329 aa		13.65	□□□□□ -0.22
DYRK4-215	ENST00000544050	ADAMTS7	Q9UKP4	1686 aa		13.65	□□□□□ -0.22
DYRK4-215	ENST00000544050	MYH14	Q7Z406	1995 aa	Known RBP	13.64	□□□□□ -0.23
DYRK4-215	ENST00000544050	CT47B1	P0C2W7	299 aa	Predicted RBP	13.64	□□□□□ -0.23
DYRK4-215	ENST00000544050	ZNF853	P0CG23	659 aa		13.64	□□□□□ -0.23
DYRK4-215	ENST00000544050	TRAPPC3L	Q5T215	181 aa		13.64	□□□□□ -0.23
DYRK4-215	ENST00000544050	RC3H1	Q5TC82	1133 aa	Known RBP	13.64	□□□□□ -0.23
DYRK4-215	ENST00000544050	CFAP44	Q96MT7	982 aa		13.64	□□□□□ -0.23
DYRK4-215	ENST00000544050	GPBP1L1	Q9HC44	474 aa	Predicted RBP	13.64	□□□□□ -0.23
DYRK4-215	ENST00000544050	SPINK5	Q9NQ38	1064 aa	Predicted RBP	13.64	□□□□□ -0.23
DYRK4-215	ENST00000544050	RTCB	Q9Y3I0	505 aa	Known RBP	13.64	□□□□□ -0.23
DYRK4-215	ENST00000544050	COL5A3	P25940	1745 aa	Predicted RBP	13.64	□□□□□ -0.23
DYRK4-215	ENST00000544050	MCM10	Q7L590	875 aa		13.63	□□□□□ -0.23
DYRK4-215	ENST00000544050	NLGN1	Q8N2Q7	840 aa		13.63	□□□□□ -0.23
DYRK4-215	ENST00000544050	FANCI	Q9NVI1	1328 aa		13.63	□□□□□ -0.23
DYRK4-215	ENST00000544050	MMP10	P09238	476 aa		13.62	□□□□□ -0.23
DYRK4-215	ENST00000544050	CABP4	P57796	275 aa		13.62	□□□□□ -0.23
DYRK4-215	ENST00000544050	DCTN1	Q14203	1278 aa		13.62	□□□□□ -0.23
DYRK4-215	ENST00000544050	SMIM5	Q71RC9	77 aa		13.62	□□□□□ -0.23
DYRK4-215	ENST00000544050	IL17RE	Q8NFR9	667 aa		13.62	□□□□□ -0.23
DYRK4-215	ENST00000544050	RBM42	Q9BTD8	480 aa	Known RBP	13.62	□□□□□ -0.23
DYRK4-215	ENST00000544050	THUMPD2	Q9BTF0	503 aa	Known RBP	13.62	□□□□□ -0.23
DYRK4-215	ENST00000544050	MRC1	P22897	1456 aa		13.61	□□□□□ -0.23
DYRK4-215	ENST00000544050	ADCY9	O60503	1353 aa		13.61	□□□□□ -0.23
DYRK4-215	ENST00000544050	N4BP2	Q86UW6	1770 aa	Predicted RBP	13.61	□□□□□ -0.23
DYRK4-215	ENST00000544050	CHL1	O00533	1208 aa		13.61	□□□□□ -0.23
DYRK4-215	ENST00000544050	RNMT	O43148	476 aa	Known RBP	13.61	□□□□□ -0.23
DYRK4-215	ENST00000544050	TGFB2	P61812	414 aa		13.61	□□□□□ -0.23
DYRK4-215	ENST00000544050	CNTNAP4	Q9C0A0	1308 aa		13.61	□□□□□ -0.23
DYRK4-215	ENST00000544050	SCN11A	Q9UI33	1791 aa		13.6	□□□□□ -0.23
DYRK4-215	ENST00000544050	VIRMA	Q69YN4	1812 aa	Known RBP	13.6	□□□□□ -0.23
DYRK4-215	ENST00000544050	TEF	Q10587	303 aa		13.6	□□□□□ -0.23
DYRK4-215	ENST00000544050	TAF7	Q15545	349 aa	Predicted RBP	13.6	□□□□□ -0.23
DYRK4-215	ENST00000544050	KDM6A	O15550	1401 aa	Predicted RBP	13.59	□□□□□ -0.23
DYRK4-215	ENST00000544050	RPS6KA4	O75676	772 aa		13.59	□□□□□ -0.23
DYRK4-215	ENST00000544050	RFC4	P35249	363 aa		13.59	□□□□□ -0.23
DYRK4-215	ENST00000544050	ZNF428	Q96B54	188 aa		13.59	□□□□□ -0.23
DYRK4-215	ENST00000544050	MBIP	Q9NS73	344 aa		13.59	□□□□□ -0.23
DYRK4-215	ENST00000544050	CCDC87	Q9NVE4	849 aa		13.59	□□□□□ -0.23
DYRK4-215	ENST00000544050	RCAN3	Q9UKA8	241 aa		13.59	□□□□□ -0.23
DYRK4-215	ENST00000544050	BRCA1	P38398	1863 aa	Known RBP	13.59	□□□□□ -0.23
DYRK4-215	ENST00000544050	C4A	P0C0L4	1744 aa		13.59	□□□□□ -0.23
DYRK4-215	ENST00000544050	CIC	Q96RK0	1608 aa	Predicted RBP	13.58	□□□□□ -0.24
DYRK4-215	ENST00000544050	ARHGEF1	Q92888	912 aa	Known RBP	13.58	□□□□□ -0.24
DYRK4-215	ENST00000544050	TSR2	Q969E8	191 aa	Known RBP	13.58	□□□□□ -0.24
DYRK4-215	ENST00000544050	SLC4A9	Q96Q91	983 aa		13.58	□□□□□ -0.24
DYRK4-215	ENST00000544050	WWC3	Q9ULE0	1092 aa		13.58	□□□□□ -0.24
DYRK4-215	ENST00000544050	PARP3	Q9Y6F1	533 aa		13.58	□□□□□ -0.24
DYRK4-215	ENST00000544050	KIAA1551	Q9HCM1	1747 aa		13.58	□□□□□ -0.24
DYRK4-215	ENST00000544050	SOS1	Q07889	1333 aa	Predicted RBP	13.58	□□□□□ -0.24
DYRK4-215	ENST00000544050	ARFGEF1	Q9Y6D6	1849 aa		13.57	□□□□□ -0.24
DYRK4-215	ENST00000544050	ZNF526	Q8TF50	670 aa	Predicted RBP	13.57	□□□□□ -0.24
DYRK4-215	ENST00000544050	LGR6	Q9HBX8	967 aa		13.57	□□□□□ -0.24
DYRK4-215	ENST00000544050	TSPYL4	Q9UJ04	414 aa		13.57	□□□□□ -0.24
DYRK4-215	ENST00000544050	LAS1L	Q9Y4W2	734 aa	Known RBP	13.57	□□□□□ -0.24
DYRK4-215	ENST00000544050	C10orf71	Q711Q0	1435 aa		13.56	□□□□□ -0.24
DYRK4-215	ENST00000544050	PXDNL	A1KZ92	1463 aa		13.56	□□□□□ -0.24
DYRK4-215	ENST00000544050	SIPA1L3	O60292	1781 aa	Predicted RBP	13.56	□□□□□ -0.24
DYRK4-215	ENST00000544050	GYS1	P13807	737 aa		13.56	□□□□□ -0.24
DYRK4-215	ENST00000544050	NFATC2IP	Q8NCF5	419 aa		13.56	□□□□□ -0.24
DYRK4-215	ENST00000544050	SLC52A2	Q9HAB3	445 aa		13.56	□□□□□ -0.24
DYRK4-215	ENST00000544050	PTCD1	O75127	700 aa	Known RBP	13.55	□□□□□ -0.24
DYRK4-215	ENST00000544050	HSPA6	P17066	643 aa		13.55	□□□□□ -0.24
DYRK4-215	ENST00000544050	EXOSC9	Q06265	439 aa	Known RBP	13.55	□□□□□ -0.24
DYRK4-215	ENST00000544050	BCS1L	Q9Y276	419 aa		13.55	□□□□□ -0.24
DYRK4-215	ENST00000544050	RNF123	Q5XPI4	1314 aa		13.55	□□□□□ -0.24
DYRK4-215	ENST00000544050	KDM3B	Q7LBC6	1761 aa		13.54	□□□□□ -0.24
DYRK4-215	ENST00000544050		A0A0G2JLW4	131 aa		13.54	□□□□□ -0.24
DYRK4-215	ENST00000544050	CRKL	P46109	303 aa	Known RBP	13.54	□□□□□ -0.24
DYRK4-215	ENST00000544050	CHMP4A	Q9BY43	222 aa		13.54	□□□□□ -0.24
DYRK4-215	ENST00000544050	TJP1	Q07157	1748 aa		13.53	□□□□□ -0.24
DYRK4-215	ENST00000544050	BTBD11	A6QL63	1104 aa		13.53	□□□□□ -0.24
DYRK4-215	ENST00000544050	HOXB7	P09629	217 aa		13.53	□□□□□ -0.24
DYRK4-215	ENST00000544050	CEP350	Q5VT06	3117 aa		13.52	□□□□□ -0.24
DYRK4-215	ENST00000544050	DPEP1	P16444	411 aa		13.52	□□□□□ -0.25
DYRK4-215	ENST00000544050	ALDH1L2	Q3SY69	923 aa		13.52	□□□□□ -0.25
DYRK4-215	ENST00000544050	ARHGAP27	Q6ZUM4	889 aa		13.52	□□□□□ -0.25
DYRK4-215	ENST00000544050	GOLGA6L2	Q8N9W4	650 aa	Predicted RBP	13.52	□□□□□ -0.25
DYRK4-215	ENST00000544050	SUPT16H	Q9Y5B9	1047 aa	Known RBP	13.52	□□□□□ -0.25
DYRK4-215	ENST00000544050	SBF1	O95248	1867 aa		13.51	□□□□□ -0.25
DYRK4-215	ENST00000544050	USP42	Q9H9J4	1324 aa	Known RBP	13.51	□□□□□ -0.25
DYRK4-215	ENST00000544050	KIF3C	O14782	793 aa		13.51	□□□□□ -0.25
DYRK4-215	ENST00000544050	NEFL	P07196	543 aa		13.51	□□□□□ -0.25
DYRK4-215	ENST00000544050	RARS	P54136	660 aa	Known RBP	13.51	□□□□□ -0.25
DYRK4-215	ENST00000544050	TWISTNB	Q3B726	338 aa	Predicted RBP	13.51	□□□□□ -0.25
DYRK4-215	ENST00000544050	PIM2	Q9P1W9	311 aa		13.51	□□□□□ -0.25
DYRK4-215	ENST00000544050	ZPR1	O75312	459 aa		13.5	□□□□□ -0.25
DYRK4-215	ENST00000544050	VAMP4	O75379	141 aa		13.5	□□□□□ -0.25
DYRK4-215	ENST00000544050	BRPF1	P55201	1214 aa	Predicted RBP	13.5	□□□□□ -0.25
DYRK4-215	ENST00000544050	EIF4A1	P60842	406 aa	Known RBP	13.5	□□□□□ -0.25
DYRK4-215	ENST00000544050	CNKSR2	Q8WXI2	1034 aa		13.5	□□□□□ -0.25
DYRK4-215	ENST00000544050	HEG1	Q9ULI3	1381 aa		13.49	□□□□□ -0.25
DYRK4-215	ENST00000544050	AFDN	P55196	1824 aa	Known RBP	13.49	□□□□□ -0.25
DYRK4-215	ENST00000544050	RRP1	P56182	461 aa	Known RBP	13.49	□□□□□ -0.25
DYRK4-215	ENST00000544050	FKBP8	Q14318	412 aa		13.49	□□□□□ -0.25
DYRK4-215	ENST00000544050	DALRD3	Q5D0E6	543 aa	Known RBP	13.49	□□□□□ -0.25
DYRK4-215	ENST00000544050	ZNF790	Q6PG37	636 aa		13.49	□□□□□ -0.25

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