RNA–Protein interactions for RNA: ENST00000543821.5

HMBS-218, Transcript of hydroxymethylbilane synthase, humanhuman

TSL 4

Gene HMBS, Length 562 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMBS-218ENST00000543821 DCTN1Q14203 1278 aa16.85■□□□□ 0.29
HMBS-218ENST00000543821 SRP68Q9UHB9 627 aaKnown RBP16.85■□□□□ 0.29
HMBS-218ENST00000543821 KIAA1551Q9HCM1 1747 aa16.84■□□□□ 0.29
HMBS-218ENST00000543821 FKBP8Q14318 412 aa16.84■□□□□ 0.29
HMBS-218ENST00000543821 TAF7Q15545 349 aaPredicted RBP16.84■□□□□ 0.29
HMBS-218ENST00000543821 NARFQ9UHQ1 456 aa16.84■□□□□ 0.29
HMBS-218ENST00000543821 C10orf71Q711Q0 1435 aa16.84■□□□□ 0.29
HMBS-218ENST00000543821 CHD4Q14839 1912 aa16.84■□□□□ 0.29
HMBS-218ENST00000543821 YBX3P16989 372 aaKnown RBP eCLIP16.83■□□□□ 0.283e-9■□□□□ 9
HMBS-218ENST00000543821 COL15A1P39059 1388 aa16.83■□□□□ 0.28
HMBS-218ENST00000543821 KLHL34Q8N239 644 aa16.83■□□□□ 0.28
HMBS-218ENST00000543821 BCL2L12Q9HB09 334 aa16.83■□□□□ 0.28
HMBS-218ENST00000543821 YY1P25490 414 aa16.82■□□□□ 0.28
HMBS-218ENST00000543821 IL6STP40189 918 aaPredicted RBP16.81■□□□□ 0.28
HMBS-218ENST00000543821 TGFB2P61812 414 aa16.81■□□□□ 0.28
HMBS-218ENST00000543821 DDR1Q08345 913 aa16.81■□□□□ 0.28
HMBS-218ENST00000543821 GPR162Q16538 588 aa16.81■□□□□ 0.28
HMBS-218ENST00000543821 PXDNLA1KZ92 1463 aa16.8■□□□□ 0.28
HMBS-218ENST00000543821 POLRMTO00411 1230 aaKnown RBP16.8■□□□□ 0.28
HMBS-218ENST00000543821 GRIN3BO60391 1043 aa16.8■□□□□ 0.28
HMBS-218ENST00000543821 NEFMP07197 916 aa16.8■□□□□ 0.28
HMBS-218ENST00000543821 USPL1Q5W0Q7 1092 aa16.8■□□□□ 0.28
HMBS-218ENST00000543821 USP16Q9Y5T5 823 aa16.8■□□□□ 0.28
HMBS-218ENST00000543821 KDM3BQ7LBC6 1761 aa16.79■□□□□ 0.28
HMBS-218ENST00000543821 NRXN2Q9P2S2 1712 aa16.79■□□□□ 0.28
HMBS-218ENST00000543821 ZPR1O75312 459 aa16.79■□□□□ 0.28
HMBS-218ENST00000543821 SNRPA1P09661 255 aaKnown RBP16.79■□□□□ 0.28
HMBS-218ENST00000543821 PNISRQ8TF01 805 aaKnown RBP16.79■□□□□ 0.28
HMBS-218ENST00000543821 PARP3Q9Y6F1 533 aa16.79■□□□□ 0.28
HMBS-218ENST00000543821 A0A087WZG4 1122 aa16.78■□□□□ 0.28
HMBS-218ENST00000543821 PRAMEF22A3QJZ6 481 aa16.78■□□□□ 0.28
HMBS-218ENST00000543821 A1BGP04217 495 aa16.78■□□□□ 0.28
HMBS-218ENST00000543821 KCNA3P22001 575 aa16.78■□□□□ 0.28
HMBS-218ENST00000543821 CANXP27824 592 aaKnown RBP16.78■□□□□ 0.28
HMBS-218ENST00000543821 TMPOP42166 694 aaKnown RBP16.78■□□□□ 0.28
HMBS-218ENST00000543821 MAPK8IP3Q9UPT6 1336 aa16.77■□□□□ 0.28
HMBS-218ENST00000543821 NFIXQ14938 502 aa16.77■□□□□ 0.28
HMBS-218ENST00000543821 BABAM1Q9NWV8 329 aa16.77■□□□□ 0.28
HMBS-218ENST00000543821 ADAMTS8Q9UP79 889 aa16.77■□□□□ 0.28
HMBS-218ENST00000543821 BRCA1P38398 1863 aaKnown RBP16.76■□□□□ 0.27
HMBS-218ENST00000543821 EIF4A1P60842 406 aaKnown RBP16.76■□□□□ 0.27
HMBS-218ENST00000543821 THUMPD2Q9BTF0 503 aaKnown RBP16.76■□□□□ 0.27
HMBS-218ENST00000543821 MIS18AQ9NYP9 233 aa16.76■□□□□ 0.27
HMBS-218ENST00000543821 SCN7AQ01118 1682 aa16.75■□□□□ 0.27
HMBS-218ENST00000543821 NBPF26B4DH59 902 aa16.75■□□□□ 0.27
HMBS-218ENST00000543821 RGL2O15211 777 aa16.75■□□□□ 0.27
HMBS-218ENST00000543821 GIGYF1O75420 1035 aaPredicted RBP16.75■□□□□ 0.27
HMBS-218ENST00000543821 RIPK4P57078 832 aa16.75■□□□□ 0.27
HMBS-218ENST00000543821 NBPF10Q6P3W6 841 aaKnown RBP16.75■□□□□ 0.27
HMBS-218ENST00000543821 NBPF15Q8N660 670 aa16.75■□□□□ 0.27
HMBS-218ENST00000543821 RUNDC1Q96C34 613 aa16.75■□□□□ 0.27
HMBS-218ENST00000543821 AFDNP55196 1824 aaKnown RBP16.75■□□□□ 0.27
HMBS-218ENST00000543821 ZNF316A6NFI3 1004 aaPredicted RBP16.74■□□□□ 0.27
HMBS-218ENST00000543821 CAMTA2O94983 1202 aa16.74■□□□□ 0.27
HMBS-218ENST00000543821 N4BP2Q86UW6 1770 aaPredicted RBP16.74■□□□□ 0.27
HMBS-218ENST00000543821 A0A0G2JLW4 131 aa16.73■□□□□ 0.27
HMBS-218ENST00000543821 TRIM35Q9UPQ4 493 aa16.73■□□□□ 0.27
HMBS-218ENST00000543821 LAMB4A4D0S4 1761 aa16.72■□□□□ 0.27
HMBS-218ENST00000543821 DPEP1P16444 411 aa16.72■□□□□ 0.27
HMBS-218ENST00000543821 PELP1Q8IZL8 1130 aaKnown RBP16.72■□□□□ 0.27
HMBS-218ENST00000543821 ZNF784Q8NCA9 323 aaPredicted RBP16.72■□□□□ 0.27
HMBS-218ENST00000543821 TBC1D2BQ9UPU7 963 aa16.72■□□□□ 0.27
HMBS-218ENST00000543821 BCORQ6W2J9 1755 aa16.72■□□□□ 0.27
HMBS-218ENST00000543821 SERPINB2P05120 415 aa16.71■□□□□ 0.27
HMBS-218ENST00000543821 LMOD3Q0VAK6 560 aa16.71■□□□□ 0.27
HMBS-218ENST00000543821 WDR43Q15061 677 aaKnown RBP eCLIP16.71■□□□□ 0.27
HMBS-218ENST00000543821 CLEC4GQ6UXB4 293 aa16.71■□□□□ 0.27
HMBS-218ENST00000543821 TBC1D9BQ66K14 1250 aa16.7■□□□□ 0.26
HMBS-218ENST00000543821 CCDC146Q8IYE0 955 aa16.7■□□□□ 0.26
HMBS-218ENST00000543821 CHL1O00533 1208 aa16.69■□□□□ 0.26
HMBS-218ENST00000543821 DZIP3Q86Y13 1208 aaKnown RBP16.69■□□□□ 0.26
HMBS-218ENST00000543821 ARFGEF1Q9Y6D6 1849 aa16.68■□□□□ 0.26
HMBS-218ENST00000543821 ADCY9O60503 1353 aa16.68■□□□□ 0.26
HMBS-218ENST00000543821 PIP4K2AP48426 406 aaPredicted RBP16.68■□□□□ 0.26
HMBS-218ENST00000543821 LRP10Q7Z4F1 713 aa16.68■□□□□ 0.26
HMBS-218ENST00000543821 RRP7AQ9Y3A4 280 aaKnown RBP16.68■□□□□ 0.26
HMBS-218ENST00000543821 CARMIL3Q8ND23 1372 aa16.67■□□□□ 0.26
HMBS-218ENST00000543821 CCDC184Q52MB2 194 aa16.67■□□□□ 0.26
HMBS-218ENST00000543821 PIM2Q9P1W9 311 aa16.67■□□□□ 0.26
HMBS-218ENST00000543821 TSPYL4Q9UJ04 414 aa16.67■□□□□ 0.26
HMBS-218ENST00000543821 ERBB4Q15303 1308 aa16.67■□□□□ 0.26
HMBS-218ENST00000543821 DLEC1Q9Y238 1755 aa16.66■□□□□ 0.26
HMBS-218ENST00000543821 ANKRD31Q8N7Z5 1873 aa16.65■□□□□ 0.26
HMBS-218ENST00000543821 CHRNA5P30532 468 aa16.65■□□□□ 0.26
HMBS-218ENST00000543821 PDIA6Q15084 440 aa16.65■□□□□ 0.26
HMBS-218ENST00000543821 PRR5LQ6MZQ0 368 aa16.65■□□□□ 0.26
HMBS-218ENST00000543821 BRIP1Q9BX63 1249 aa16.65■□□□□ 0.26
HMBS-218ENST00000543821 ERVV-1B6SEH8 477 aa16.64■□□□□ 0.25
HMBS-218ENST00000543821 ZNF853P0CG23 659 aa16.64■□□□□ 0.25
HMBS-218ENST00000543821 NPM2Q86SE8 214 aaKnown RBP16.64■□□□□ 0.25
HMBS-218ENST00000543821 SETDB2Q96T68 719 aa16.64■□□□□ 0.25
HMBS-218ENST00000543821 WWC3Q9ULE0 1092 aa16.64■□□□□ 0.25
HMBS-218ENST00000543821 PDZRN3Q9UPQ7 1066 aa16.64■□□□□ 0.25
HMBS-218ENST00000543821 BCS1LQ9Y276 419 aa16.64■□□□□ 0.25
HMBS-218ENST00000543821 ZNF330Q9Y3S2 320 aaPredicted RBP16.64■□□□□ 0.25
HMBS-218ENST00000543821 NEUROD2Q15784 382 aa16.63■□□□□ 0.25
HMBS-218ENST00000543821 DALRD3Q5D0E6 543 aaKnown RBP16.63■□□□□ 0.25
HMBS-218ENST00000543821 BICDL1Q6ZP65 573 aa16.63■□□□□ 0.25
HMBS-218ENST00000543821 CFAP44Q96MT7 982 aa16.63■□□□□ 0.25
HMBS-218ENST00000543821 KLRG2A4D1S0 409 aaPredicted RBP16.62■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms