RNA–Protein interactions for RNA: ENST00000543637.1

NUP43-206, Transcript of nucleoporin 43, humanhuman

TSL 5

Gene NUP43, Length 576 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP43-206ENST00000543637 USP42Q9H9J4 1324 aaKnown RBP9.51□□□□□ -0.89
NUP43-206ENST00000543637 SIPA1L3O60292 1781 aaPredicted RBP9.5□□□□□ -0.89
NUP43-206ENST00000543637 FKBP8Q14318 412 aa9.5□□□□□ -0.89
NUP43-206ENST00000543637 ARHGAP27Q6ZUM4 889 aa9.5□□□□□ -0.89
NUP43-206ENST00000543637 PIM2Q9P1W9 311 aa9.5□□□□□ -0.89
NUP43-206ENST00000543637 NARFQ9UHQ1 456 aa9.5□□□□□ -0.89
NUP43-206ENST00000543637 ZNF330Q9Y3S2 320 aaPredicted RBP9.5□□□□□ -0.89
NUP43-206ENST00000543637 SRCAPQ6ZRS2 3230 aa9.5□□□□□ -0.89
NUP43-206ENST00000543637 UBR2Q8IWV8 1755 aa9.5□□□□□ -0.89
NUP43-206ENST00000543637 MRC1P22897 1456 aa9.49□□□□□ -0.89
NUP43-206ENST00000543637 NPHP1O15259 732 aa9.49□□□□□ -0.89
NUP43-206ENST00000543637 GIGYF1O75420 1035 aaPredicted RBP9.49□□□□□ -0.89
NUP43-206ENST00000543637 DPEP1P16444 411 aa9.49□□□□□ -0.89
NUP43-206ENST00000543637 TM4SF1P30408 202 aa9.49□□□□□ -0.89
NUP43-206ENST00000543637 HOXD11P31277 338 aaPredicted RBP9.49□□□□□ -0.89
NUP43-206ENST00000543637 ZNF496Q96IT1 587 aaPredicted RBP9.49□□□□□ -0.89
NUP43-206ENST00000543637 GPBP1L1Q9HC44 474 aaPredicted RBP9.49□□□□□ -0.89
NUP43-206ENST00000543637 ZBTB1Q9Y2K1 713 aa9.49□□□□□ -0.89
NUP43-206ENST00000543637 SOS1Q07889 1333 aaPredicted RBP9.49□□□□□ -0.89
NUP43-206ENST00000543637 COL15A1P39059 1388 aa9.49□□□□□ -0.89
NUP43-206ENST00000543637 HEG1Q9ULI3 1381 aa9.49□□□□□ -0.89
NUP43-206ENST00000543637 DLG5Q8TDM6 1919 aa9.48□□□□□ -0.89
NUP43-206ENST00000543637 AFDNP55196 1824 aaKnown RBP9.48□□□□□ -0.89
NUP43-206ENST00000543637 SERPINB2P05120 415 aa9.48□□□□□ -0.89
NUP43-206ENST00000543637 RALBP1Q15311 655 aa9.48□□□□□ -0.89
NUP43-206ENST00000543637 TAF7Q15545 349 aaPredicted RBP9.48□□□□□ -0.89
NUP43-206ENST00000543637 PNISRQ8TF01 805 aaKnown RBP9.48□□□□□ -0.89
NUP43-206ENST00000543637 MAPK8IP3Q9UPT6 1336 aa9.48□□□□□ -0.89
NUP43-206ENST00000543637 KCPQ6ZWJ8 1503 aa9.47□□□□□ -0.89
NUP43-206ENST00000543637 SNRPA1P09661 255 aaKnown RBP9.47□□□□□ -0.89
NUP43-206ENST00000543637 IL6STP40189 918 aaPredicted RBP9.47□□□□□ -0.89
NUP43-206ENST00000543637 C1QTNF8P60827 252 aa9.47□□□□□ -0.89
NUP43-206ENST00000543637 DDX10Q13206 875 aaKnown RBP9.47□□□□□ -0.89
NUP43-206ENST00000543637 DALRD3Q5D0E6 543 aaKnown RBP9.47□□□□□ -0.89
NUP43-206ENST00000543637 BICDL1Q6ZP65 573 aa9.47□□□□□ -0.89
NUP43-206ENST00000543637 MCM10Q7L590 875 aa9.47□□□□□ -0.89
NUP43-206ENST00000543637 ARFGEF1Q9Y6D6 1849 aa9.47□□□□□ -0.89
NUP43-206ENST00000543637 POLRMTO00411 1230 aaKnown RBP9.46□□□□□ -0.9
NUP43-206ENST00000543637 A1BGP04217 495 aa9.46□□□□□ -0.9
NUP43-206ENST00000543637 EIF5P55010 431 aaKnown RBP9.46□□□□□ -0.9
NUP43-206ENST00000543637 NFIXQ14938 502 aa9.46□□□□□ -0.9
NUP43-206ENST00000543637 TBC1D2BQ9UPU7 963 aa9.46□□□□□ -0.9
NUP43-206ENST00000543637 CEMIPQ8WUJ3 1361 aa9.46□□□□□ -0.9
NUP43-206ENST00000543637 C10orf71Q711Q0 1435 aa9.46□□□□□ -0.9
NUP43-206ENST00000543637 BRCA1P38398 1863 aaKnown RBP9.45□□□□□ -0.9
NUP43-206ENST00000543637 H0YIN7 160 aa9.45□□□□□ -0.9
NUP43-206ENST00000543637 DDR1Q08345 913 aa9.45□□□□□ -0.9
NUP43-206ENST00000543637 DCTN1Q14203 1278 aa9.45□□□□□ -0.9
NUP43-206ENST00000543637 ZNF526Q8TF50 670 aaPredicted RBP9.45□□□□□ -0.9
NUP43-206ENST00000543637 SETDB2Q96T68 719 aa9.45□□□□□ -0.9
NUP43-206ENST00000543637 PDZRN3Q9UPQ7 1066 aa9.45□□□□□ -0.9
NUP43-206ENST00000543637 USP16Q9Y5T5 823 aa9.45□□□□□ -0.9
NUP43-206ENST00000543637 PXDNLA1KZ92 1463 aa9.45□□□□□ -0.9
NUP43-206ENST00000543637 KIAA1551Q9HCM1 1747 aa9.45□□□□□ -0.9
NUP43-206ENST00000543637 CCDC88AQ3V6T2 1871 aa9.45□□□□□ -0.9
NUP43-206ENST00000543637 SENP3-EIF4A1A0A087X0R7 540 aa9.44□□□□□ -0.9
NUP43-206ENST00000543637 KCNQ3O43525 872 aa9.44□□□□□ -0.9
NUP43-206ENST00000543637 KCNA3P22001 575 aa9.44□□□□□ -0.9
NUP43-206ENST00000543637 PDE6BP35913 854 aa9.44□□□□□ -0.9
NUP43-206ENST00000543637 DZIP3Q86Y13 1208 aaKnown RBP9.44□□□□□ -0.9
NUP43-206ENST00000543637 ZNF652Q9Y2D9 606 aa9.44□□□□□ -0.9
NUP43-206ENST00000543637 ATP10DQ9P241 1426 aa9.44□□□□□ -0.9
NUP43-206ENST00000543637 CHRNA5P30532 468 aa9.43□□□□□ -0.9
NUP43-206ENST00000543637 CACNB1Q02641 598 aaPredicted RBP9.43□□□□□ -0.9
NUP43-206ENST00000543637 NFE2L2Q16236 605 aa9.43□□□□□ -0.9
NUP43-206ENST00000543637 TBC1D9BQ66K14 1250 aa9.43□□□□□ -0.9
NUP43-206ENST00000543637 C2CD5Q86YS7 1000 aa9.43□□□□□ -0.9
NUP43-206ENST00000543637 TTLL6Q8N841 843 aa9.43□□□□□ -0.9
NUP43-206ENST00000543637 BCL2L12Q9HB09 334 aa9.43□□□□□ -0.9
NUP43-206ENST00000543637 GTF2E1P29083 439 aaPredicted RBP9.42□□□□□ -0.9
NUP43-206ENST00000543637 RIPK4P57078 832 aa9.42□□□□□ -0.9
NUP43-206ENST00000543637 ST5P78524 1137 aa9.42□□□□□ -0.9
NUP43-206ENST00000543637 LMOD3Q0VAK6 560 aa9.42□□□□□ -0.9
NUP43-206ENST00000543637 WDR43Q15061 677 aaKnown RBP eCLIP9.42□□□□□ -0.9
NUP43-206ENST00000543637 CLEC4GQ6UXB4 293 aa9.42□□□□□ -0.9
NUP43-206ENST00000543637 ZNF622Q969S3 477 aaKnown RBP eCLIP9.42□□□□□ -0.9
NUP43-206ENST00000543637 PLEKHF1Q96S99 279 aa9.42□□□□□ -0.9
NUP43-206ENST00000543637 MIS18AQ9NYP9 233 aa9.42□□□□□ -0.9
NUP43-206ENST00000543637 SBF1O95248 1867 aa9.42□□□□□ -0.9
NUP43-206ENST00000543637 NRXN2Q9P2S2 1712 aa9.42□□□□□ -0.9
NUP43-206ENST00000543637 CARMIL3Q8ND23 1372 aa9.41□□□□□ -0.9
NUP43-206ENST00000543637 MYBBP1AQ9BQG0 1328 aaKnown RBP9.41□□□□□ -0.9
NUP43-206ENST00000543637 C9orf131Q5VYM1 1079 aa9.41□□□□□ -0.9
NUP43-206ENST00000543637 TPTE2Q6XPS3 522 aa9.41□□□□□ -0.9
NUP43-206ENST00000543637 C16orf71Q8IYS4 520 aaPredicted RBP9.41□□□□□ -0.9
NUP43-206ENST00000543637 CNKSR2Q8WXI2 1034 aa9.41□□□□□ -0.9
NUP43-206ENST00000543637 BRIP1Q9BX63 1249 aa9.41□□□□□ -0.9
NUP43-206ENST00000543637 CACNA1SQ13698 1873 aa9.4□□□□□ -0.9
NUP43-206ENST00000543637 KDM2BQ8NHM5 1336 aa9.4□□□□□ -0.9
NUP43-206ENST00000543637 PRAMEF22A3QJZ6 481 aa9.4□□□□□ -0.9
NUP43-206ENST00000543637 ZEB1P37275 1124 aaPredicted RBP9.4□□□□□ -0.9
NUP43-206ENST00000543637 PIP4K2AP48426 406 aaPredicted RBP9.4□□□□□ -0.9
NUP43-206ENST00000543637 NBPF5PQ86XG9 351 aaPredicted RBP9.4□□□□□ -0.9
NUP43-206ENST00000543637 NGEFQ8N5V2 710 aa9.4□□□□□ -0.9
NUP43-206ENST00000543637 CNBD1Q8NA66 436 aa9.4□□□□□ -0.9
NUP43-206ENST00000543637 RNF181Q9P0P0 153 aa9.4□□□□□ -0.9
NUP43-206ENST00000543637 RRP7AQ9Y3A4 280 aaKnown RBP9.4□□□□□ -0.9
NUP43-206ENST00000543637 NUP98P52948 1817 aa9.4□□□□□ -0.91
NUP43-206ENST00000543637 DLEC1Q9Y238 1755 aa9.4□□□□□ -0.91
NUP43-206ENST00000543637 SCN7AQ01118 1682 aa9.39□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms