RNA–Protein interactions for RNA: ENST00000543555.5

MSH2-206, Transcript of mutS homolog 2, humanhuman

TSL 2 BASIC

Gene MSH2, Length 3,024 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH2-206ENST00000543555 PI4KAP1Q8N8J0 262 aa17.12■□□□□ 0.33
MSH2-206ENST00000543555 MX1P20591 662 aa17.12■□□□□ 0.33
MSH2-206ENST00000543555 CIZ1Q9ULV3 898 aaPredicted RBP17.12■□□□□ 0.33
MSH2-206ENST00000543555 RGPD5Q99666 1765 aa17.12■□□□□ 0.33
MSH2-206ENST00000543555 HEG1Q9ULI3 1381 aa17.11■□□□□ 0.33
MSH2-206ENST00000543555 DBF4Q9UBU7 674 aaPredicted RBP17.11■□□□□ 0.33
MSH2-206ENST00000543555 ADAMTS7Q9UKP4 1686 aa17.11■□□□□ 0.33
MSH2-206ENST00000543555 ROBO1Q9Y6N7 1651 aa17.11■□□□□ 0.33
MSH2-206ENST00000543555 REC8O95072 547 aa17.11■□□□□ 0.33
MSH2-206ENST00000543555 ANXA1P04083 346 aa17.11■□□□□ 0.33
MSH2-206ENST00000543555 ADCY9O60503 1353 aa17.11■□□□□ 0.33
MSH2-206ENST00000543555 GIGYF1O75420 1035 aaPredicted RBP17.1■□□□□ 0.33
MSH2-206ENST00000543555 PRDM11Q9NQV5 511 aa17.1■□□□□ 0.33
MSH2-206ENST00000543555 ERC2O15083 957 aa17.1■□□□□ 0.33
MSH2-206ENST00000543555 POLA2Q14181 598 aa17.1■□□□□ 0.33
MSH2-206ENST00000543555 TSHZ3Q63HK5 1081 aa17.1■□□□□ 0.33
MSH2-206ENST00000543555 SIPA1L3O60292 1781 aaPredicted RBP17.1■□□□□ 0.33
MSH2-206ENST00000543555 PPP1R42Q7Z4L9 355 aa17.1■□□□□ 0.33
MSH2-206ENST00000543555 STRN4Q9NRL3 753 aa17.1■□□□□ 0.33
MSH2-206ENST00000543555 STAP2Q9UGK3 403 aa17.1■□□□□ 0.33
MSH2-206ENST00000543555 TUBGCP6Q96RT7 1819 aa17.09■□□□□ 0.33
MSH2-206ENST00000543555 NBPF7P0C2Y1 421 aaPredicted RBP17.09■□□□□ 0.33
MSH2-206ENST00000543555 CSB-PGBD3P0DP91 1061 aa17.09■□□□□ 0.33
MSH2-206ENST00000543555 HSP90AA1P07900 732 aaKnown RBP17.08■□□□□ 0.33
MSH2-206ENST00000543555 RAB11FIP3O75154 756 aa17.08■□□□□ 0.32
MSH2-206ENST00000543555 RAPGEF4Q8WZA2 1011 aa17.07■□□□□ 0.32
MSH2-206ENST00000543555 NLRP2Q9NX02 1062 aa17.07■□□□□ 0.32
MSH2-206ENST00000543555 AOX1Q06278 1338 aa17.07■□□□□ 0.32
MSH2-206ENST00000543555 SRGAP3O43295 1099 aa17.07■□□□□ 0.32
MSH2-206ENST00000543555 SURF6O75683 361 aaKnown RBP17.06■□□□□ 0.32
MSH2-206ENST00000543555 PROSER3Q2NL68 480 aa17.06■□□□□ 0.32
MSH2-206ENST00000543555 PRAMEF22A3QJZ6 481 aa17.06■□□□□ 0.32
MSH2-206ENST00000543555 RAB3GAP1Q15042 981 aa17.05■□□□□ 0.32
MSH2-206ENST00000543555 IL1RAPL2Q9NP60 686 aa17.05■□□□□ 0.32
MSH2-206ENST00000543555 FOXD4L1Q9NU39 408 aa17.05■□□□□ 0.32
MSH2-206ENST00000543555 MAP3K2Q9Y2U5 619 aa17.05■□□□□ 0.32
MSH2-206ENST00000543555 COL18A1P39060 1754 aa17.05■□□□□ 0.32
MSH2-206ENST00000543555 ALDH1L1O75891 902 aa17.05■□□□□ 0.32
MSH2-206ENST00000543555 TATP17735 454 aaPredicted RBP17.05■□□□□ 0.32
MSH2-206ENST00000543555 KSR2Q6VAB6 950 aa17.05■□□□□ 0.32
MSH2-206ENST00000543555 TNPO1Q92973 898 aaKnown RBP17.05■□□□□ 0.32
MSH2-206ENST00000543555 HYPKQ9NX55 129 aa17.05■□□□□ 0.32
MSH2-206ENST00000543555 KDM6AO15550 1401 aaPredicted RBP17.04■□□□□ 0.32
MSH2-206ENST00000543555 ABCC6O95255 1503 aa17.04■□□□□ 0.32
MSH2-206ENST00000543555 DDX11L8A8MPP1 907 aa17.04■□□□□ 0.32
MSH2-206ENST00000543555 RHPN1Q8TCX5 695 aa17.04■□□□□ 0.32
MSH2-206ENST00000543555 ESYT1Q9BSJ8 1104 aa17.04■□□□□ 0.32
MSH2-206ENST00000543555 TRIM6-TRIM34B2RNG4 842 aa17.04■□□□□ 0.32
MSH2-206ENST00000543555 KIF1BPQ96EK5 621 aa17.04■□□□□ 0.32
MSH2-206ENST00000543555 MEGF6O75095 1541 aa17.03■□□□□ 0.32
MSH2-206ENST00000543555 RILPL2Q969X0 211 aa17.03■□□□□ 0.32
MSH2-206ENST00000543555 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP17.03■□□□□ 0.326e-7■■■□□ 17.1
MSH2-206ENST00000543555 SPG7Q9UQ90 795 aa17.03■□□□□ 0.32
MSH2-206ENST00000543555 CRYBG1Q9Y4K1 1723 aa17.03■□□□□ 0.32
MSH2-206ENST00000543555 PHKG2P15735 406 aa17.03■□□□□ 0.32
MSH2-206ENST00000543555 CHMLP26374 656 aa17.03■□□□□ 0.32
MSH2-206ENST00000543555 SLC52A2Q9HAB3 445 aa17.03■□□□□ 0.32
MSH2-206ENST00000543555 HSPA1LP34931 641 aa17.02■□□□□ 0.32
MSH2-206ENST00000543555 MTX1Q13505 466 aa17.02■□□□□ 0.32
MSH2-206ENST00000543555 ST18O60284 1047 aa17.02■□□□□ 0.32
MSH2-206ENST00000543555 ZNF790Q6PG37 636 aa17.02■□□□□ 0.32
MSH2-206ENST00000543555 NUTM1Q86Y26 1132 aa17.02■□□□□ 0.32
MSH2-206ENST00000543555 DDX21Q9NR30 783 aaKnown RBP eCLIP17.02■□□□□ 0.32
MSH2-206ENST00000543555 SCN11AQ9UI33 1791 aa17.02■□□□□ 0.31
MSH2-206ENST00000543555 HSP90AB4PQ58FF6 505 aa17.02■□□□□ 0.31
MSH2-206ENST00000543555 PLEKHG2Q9H7P9 1386 aa17.01■□□□□ 0.31
MSH2-206ENST00000543555 TRAK2O60296 914 aa17.01■□□□□ 0.31
MSH2-206ENST00000543555 UNC5CLQ8IV45 518 aa17.01■□□□□ 0.31
MSH2-206ENST00000543555 GBP4Q96PP9 640 aa17.01■□□□□ 0.31
MSH2-206ENST00000543555 BTG4Q9NY30 223 aa17.01■□□□□ 0.31
MSH2-206ENST00000543555 C9orf78Q9NZ63 289 aaPredicted RBP17.01■□□□□ 0.31
MSH2-206ENST00000543555 SLC39A6Q13433 755 aa17■□□□□ 0.31
MSH2-206ENST00000543555 DDX58O95786 925 aaKnown RBP17■□□□□ 0.31
MSH2-206ENST00000543555 EVA1CP58658 441 aa17■□□□□ 0.31
MSH2-206ENST00000543555 PDIA6Q15084 440 aa17■□□□□ 0.31
MSH2-206ENST00000543555 IFNL2Q8IZJ0 200 aa17■□□□□ 0.31
MSH2-206ENST00000543555 CWF19L2Q2TBE0 894 aaKnown RBP16.99■□□□□ 0.31
MSH2-206ENST00000543555 LINS1Q8NG48 757 aa16.99■□□□□ 0.31
MSH2-206ENST00000543555 PI4K2BQ8TCG2 481 aa16.99■□□□□ 0.31
MSH2-206ENST00000543555 HDAC5Q9UQL6 1122 aa16.99■□□□□ 0.31
MSH2-206ENST00000543555 LARP1Q6PKG0 1096 aaKnown RBP16.99■□□□□ 0.31
MSH2-206ENST00000543555 TOM1L2Q6ZVM7 507 aa16.99■□□□□ 0.31
MSH2-206ENST00000543555 NFATC2IPQ8NCF5 419 aa16.99■□□□□ 0.31
MSH2-206ENST00000543555 CPDO75976 1380 aa16.98■□□□□ 0.31
MSH2-206ENST00000543555 C5P01031 1676 aa16.98■□□□□ 0.31
MSH2-206ENST00000543555 MRC1P22897 1456 aa16.98■□□□□ 0.31
MSH2-206ENST00000543555 MCCP23508 829 aa16.97■□□□□ 0.31
MSH2-206ENST00000543555 ANO2Q9NQ90 1003 aa16.97■□□□□ 0.31
MSH2-206ENST00000543555 BRPF3Q9ULD4 1205 aa16.97■□□□□ 0.31
MSH2-206ENST00000543555 UTYO14607 1347 aa16.97■□□□□ 0.31
MSH2-206ENST00000543555 AIMP1Q12904 312 aaKnown RBP16.97■□□□□ 0.31
MSH2-206ENST00000543555 GRM8O00222 908 aa16.96■□□□□ 0.31
MSH2-206ENST00000543555 SSFA2P28290 1259 aa16.96■□□□□ 0.31
MSH2-206ENST00000543555 OS9Q13438 667 aaPredicted RBP16.96■□□□□ 0.31
MSH2-206ENST00000543555 DCAF5Q96JK2 942 aa16.96■□□□□ 0.31
MSH2-206ENST00000543555 NHSL1Q5SYE7 1610 aa16.96■□□□□ 0.31
MSH2-206ENST00000543555 USP42Q9H9J4 1324 aaKnown RBP16.96■□□□□ 0.31
MSH2-206ENST00000543555 CYP27B1O15528 508 aa16.96■□□□□ 0.31
MSH2-206ENST00000543555 C8orf37Q96NL8 207 aa16.96■□□□□ 0.31
MSH2-206ENST00000543555 PKD1L3Q7Z443 1732 aa16.96■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 42.2 ms