RNA–Protein interactions for RNA: ENST00000543475.1

SMCR5-201, Transcript of Smith-Magenis syndrome chromosome region, candidate 5, humanhuman

BASIC

Gene SMCR5, Length 2,844 nt, Biotype antisense RNA.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCR5-201ENST00000543475 LIMCH1Q9UPQ0 1083 aa15.03■□□□□ -0
SMCR5-201ENST00000543475 CPS1P31327 1500 aa15.03■□□□□ -0
SMCR5-201ENST00000543475 AP5Z1O43299 807 aa15.02■□□□□ -0
SMCR5-201ENST00000543475 KIF20AO95235 890 aa15.02■□□□□ -0
SMCR5-201ENST00000543475 AK2P54819 239 aa15.02■□□□□ -0
SMCR5-201ENST00000543475 DLC1Q96QB1 1528 aa15.02■□□□□ -0
SMCR5-201ENST00000543475 NUDT16Q96DE0 195 aaKnown RBP15.02□□□□□ -0.01
SMCR5-201ENST00000543475 IL1RAPL2Q9NP60 686 aa15.02□□□□□ -0.01
SMCR5-201ENST00000543475 SNX14Q9Y5W7 946 aa15.02□□□□□ -0.01
SMCR5-201ENST00000543475 AOX1Q06278 1338 aa15.01□□□□□ -0.01
SMCR5-201ENST00000543475 RAD50Q92878 1312 aa15.01□□□□□ -0.01
SMCR5-201ENST00000543475 NCKAP5LQ9HCH0 1330 aa15.01□□□□□ -0.01
SMCR5-201ENST00000543475 DIP2CQ9Y2E4 1556 aa15.01□□□□□ -0.01
SMCR5-201ENST00000543475 MAP4K4O95819 1239 aaPredicted RBP15.01□□□□□ -0.01
SMCR5-201ENST00000543475 FBXO31Q5XUX0 539 aaPredicted RBP15.01□□□□□ -0.01
SMCR5-201ENST00000543475 TTC14Q96N46 770 aa15.01□□□□□ -0.01
SMCR5-201ENST00000543475 CRB1P82279 1406 aa15.01□□□□□ -0.01
SMCR5-201ENST00000543475 CCDC192P0DO97 292 aa15.01□□□□□ -0.01
SMCR5-201ENST00000543475 U2AF2P26368 475 aaKnown RBP eCLIP15.01□□□□□ -0.01
SMCR5-201ENST00000543475 DNM1Q05193 864 aaKnown RBP15.01□□□□□ -0.01
SMCR5-201ENST00000543475 RUFY3Q7L099 469 aa15.01□□□□□ -0.01
SMCR5-201ENST00000543475 ANKRD7Q92527 254 aa15.01□□□□□ -0.01
SMCR5-201ENST00000543475 RTF1Q92541 710 aaKnown RBP15.01□□□□□ -0.01
SMCR5-201ENST00000543475 LRRFIP2Q9Y608 721 aaKnown RBP15.01□□□□□ -0.01
SMCR5-201ENST00000543475 NUTM1Q86Y26 1132 aa15□□□□□ -0.01
SMCR5-201ENST00000543475 NRKQ7Z2Y5 1582 aa14.99□□□□□ -0.01
SMCR5-201ENST00000543475 SGSM2O43147 1006 aa14.99□□□□□ -0.01
SMCR5-201ENST00000543475 CTIFO43310 598 aaKnown RBP14.99□□□□□ -0.01
SMCR5-201ENST00000543475 CCDC61Q9Y6R9 512 aa14.99□□□□□ -0.01
SMCR5-201ENST00000543475 FLIIQ13045 1269 aa14.99□□□□□ -0.01
SMCR5-201ENST00000543475 MON2Q7Z3U7 1717 aa14.98□□□□□ -0.01
SMCR5-201ENST00000543475 RASEFQ8IZ41 740 aa14.98□□□□□ -0.01
SMCR5-201ENST00000543475 GJB2P29033 226 aa14.98□□□□□ -0.01
SMCR5-201ENST00000543475 CCDC83Q8IWF9 413 aa14.98□□□□□ -0.01
SMCR5-201ENST00000543475 ARHGEF10O15013 1369 aa14.98□□□□□ -0.01
SMCR5-201ENST00000543475 FOXO3O43524 673 aa14.98□□□□□ -0.01
SMCR5-201ENST00000543475 CASTP20810 708 aaKnown RBP14.98□□□□□ -0.01
SMCR5-201ENST00000543475 PTGS1P23219 599 aa14.98□□□□□ -0.01
SMCR5-201ENST00000543475 LSG1Q9H089 658 aaKnown RBP14.97□□□□□ -0.01
SMCR5-201ENST00000543475 MTMR6Q9Y217 621 aa14.97□□□□□ -0.01
SMCR5-201ENST00000543475 VPS37CA5D8V6 355 aaPredicted RBP14.97□□□□□ -0.01
SMCR5-201ENST00000543475 CPA1P15085 419 aa14.97□□□□□ -0.01
SMCR5-201ENST00000543475 HSP90AB2PQ58FF8 381 aa14.97□□□□□ -0.01
SMCR5-201ENST00000543475 FAM200AQ8TCP9 573 aa14.97□□□□□ -0.01
SMCR5-201ENST00000543475 NECTIN2Q92692 538 aa14.97□□□□□ -0.01
SMCR5-201ENST00000543475 FEZ1Q99689 392 aa14.97□□□□□ -0.01
SMCR5-201ENST00000543475 SOS1Q07889 1333 aaPredicted RBP14.97□□□□□ -0.01
SMCR5-201ENST00000543475 DTNBO60941 627 aa14.96□□□□□ -0.01
SMCR5-201ENST00000543475 LARGE1O95461 756 aa14.96□□□□□ -0.01
SMCR5-201ENST00000543475 UBTFL1P0CB47 393 aaPredicted RBP14.96□□□□□ -0.01
SMCR5-201ENST00000543475 C3P01024 1663 aa14.96□□□□□ -0.01
SMCR5-201ENST00000543475 CCDC30Q5VVM6 783 aa14.96□□□□□ -0.02
SMCR5-201ENST00000543475 CWC27Q6UX04 472 aaKnown RBP14.96□□□□□ -0.02
SMCR5-201ENST00000543475 DRC7Q8IY82 874 aa14.96□□□□□ -0.02
SMCR5-201ENST00000543475 CNTROBQ8N137 903 aa14.96□□□□□ -0.02
SMCR5-201ENST00000543475 CHMP3Q9Y3E7 222 aa14.96□□□□□ -0.02
SMCR5-201ENST00000543475 RIMBP3CA6NJZ7 1639 aa14.95□□□□□ -0.02
SMCR5-201ENST00000543475 RIMBP3BA6NNM3 1639 aa14.95□□□□□ -0.02
SMCR5-201ENST00000543475 RIMBP3Q9UFD9 1639 aa14.95□□□□□ -0.02
SMCR5-201ENST00000543475 SURF6O75683 361 aaKnown RBP14.95□□□□□ -0.02
SMCR5-201ENST00000543475 HYPKQ9NX55 129 aa14.95□□□□□ -0.02
SMCR5-201ENST00000543475 SPG7Q9UQ90 795 aa14.95□□□□□ -0.02
SMCR5-201ENST00000543475 ITSN1Q15811 1721 aa14.95□□□□□ -0.02
SMCR5-201ENST00000543475 MAP3K11Q16584 847 aa14.95□□□□□ -0.02
SMCR5-201ENST00000543475 TXNDC2Q86VQ3 553 aa14.95□□□□□ -0.02
SMCR5-201ENST00000543475 PI4K2BQ8TCG2 481 aa14.95□□□□□ -0.02
SMCR5-201ENST00000543475 IGSF3O75054 1194 aa14.94□□□□□ -0.02
SMCR5-201ENST00000543475 RAB11FIP3O75154 756 aa14.94□□□□□ -0.02
SMCR5-201ENST00000543475 NCBP1Q09161 790 aaKnown RBP14.94□□□□□ -0.02
SMCR5-201ENST00000543475 MTHFSDQ2M296 383 aaKnown RBP14.94□□□□□ -0.02
SMCR5-201ENST00000543475 C16orf45Q96MC5 204 aaPredicted RBP14.94□□□□□ -0.02
SMCR5-201ENST00000543475 NUP62CLQ9H1M0 184 aa14.94□□□□□ -0.02
SMCR5-201ENST00000543475 CAMK4Q16566 473 aa14.94□□□□□ -0.02
SMCR5-201ENST00000543475 CCDC186Q7Z3E2 898 aa14.94□□□□□ -0.02
SMCR5-201ENST00000543475 LUZP1Q86V48 1076 aa14.94□□□□□ -0.02
SMCR5-201ENST00000543475 PDRG1Q9NUG6 133 aa14.94□□□□□ -0.02
SMCR5-201ENST00000543475 OGFRQ9NZT2 677 aa14.94□□□□□ -0.02
SMCR5-201ENST00000543475 AKAP12Q02952 1782 aa14.94□□□□□ -0.02
SMCR5-201ENST00000543475 SOX12O15370 315 aa14.93□□□□□ -0.02
SMCR5-201ENST00000543475 TYRO3Q06418 890 aa14.93□□□□□ -0.02
SMCR5-201ENST00000543475 TAF7LQ5H9L4 462 aa14.93□□□□□ -0.02
SMCR5-201ENST00000543475 RHPN1Q8TCX5 695 aa14.93□□□□□ -0.02
SMCR5-201ENST00000543475 SSH3Q8TE77 659 aa14.93□□□□□ -0.02
SMCR5-201ENST00000543475 USP44Q9H0E7 712 aa14.93□□□□□ -0.02
SMCR5-201ENST00000543475 XRN1Q8IZH2 1706 aaKnown RBP14.93□□□□□ -0.02
SMCR5-201ENST00000543475 ZSCAN31Q96LW9 406 aaPredicted RBP14.93□□□□□ -0.02
SMCR5-201ENST00000543475 SH2B1Q9NRF2 756 aaPredicted RBP14.93□□□□□ -0.02
SMCR5-201ENST00000543475 MRVI1Q9Y6F6 885 aa14.93□□□□□ -0.02
SMCR5-201ENST00000543475 SMTNL1A8MU46 457 aa14.93□□□□□ -0.02
SMCR5-201ENST00000543475 KRT85P78386 507 aa14.93□□□□□ -0.02
SMCR5-201ENST00000543475 JAKMIP1Q96N16 626 aaKnown RBP14.93□□□□□ -0.02
SMCR5-201ENST00000543475 LRMPQ12912 555 aa14.92□□□□□ -0.02
SMCR5-201ENST00000543475 VPS53Q5VIR6 699 aa14.92□□□□□ -0.02
SMCR5-201ENST00000543475 PPP1R42Q7Z4L9 355 aa14.92□□□□□ -0.02
SMCR5-201ENST00000543475 NEO1Q92859 1461 aa14.92□□□□□ -0.02
SMCR5-201ENST00000543475 MAP3K19Q56UN5 1328 aa14.92□□□□□ -0.02
SMCR5-201ENST00000543475 CACNA1FO60840 1977 aa14.92□□□□□ -0.02
SMCR5-201ENST00000543475 SYCP1Q15431 976 aa14.92□□□□□ -0.02
SMCR5-201ENST00000543475 ZNF771Q7L3S4 317 aaPredicted RBP14.92□□□□□ -0.02
SMCR5-201ENST00000543475 TRIM5Q9C035 493 aa14.92□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms