RNA–Protein interactions for RNA: ENST00000543415.5

GTF2H3-213, Transcript of general transcription factor IIH subunit 3, humanhuman

TSL 5

Gene GTF2H3, Length 907 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2H3-213ENST00000543415 MSTNO14793 375 aa6.53□□□□□ -1.36
GTF2H3-213ENST00000543415 UBAP2LQ14157 1087 aaKnown RBP6.53□□□□□ -1.36
GTF2H3-213ENST00000543415 FIGNL1Q6PIW4 674 aa6.53□□□□□ -1.36
GTF2H3-213ENST00000543415 TBC1D9Q6ZT07 1266 aa6.53□□□□□ -1.36
GTF2H3-213ENST00000543415 DEPDC4Q8N2C3 294 aa6.53□□□□□ -1.36
GTF2H3-213ENST00000543415 GOLGA6L1Q8N7Z2 621 aa6.53□□□□□ -1.36
GTF2H3-213ENST00000543415 GALNT6Q8NCL4 622 aa6.53□□□□□ -1.36
GTF2H3-213ENST00000543415 CRISPLD1Q9H336 500 aa6.53□□□□□ -1.36
GTF2H3-213ENST00000543415 USP17L5A8MUK1 530 aa6.52□□□□□ -1.37
GTF2H3-213ENST00000543415 INHAP05111 366 aa6.52□□□□□ -1.37
GTF2H3-213ENST00000543415 BMP4P12644 408 aa6.52□□□□□ -1.37
GTF2H3-213ENST00000543415 GDF10P55107 478 aa6.52□□□□□ -1.37
GTF2H3-213ENST00000543415 NCOA4Q13772 614 aa6.52□□□□□ -1.37
GTF2H3-213ENST00000543415 PLA2G4EQ3MJ16 856 aa6.52□□□□□ -1.37
GTF2H3-213ENST00000543415 ALYREFQ86V81 257 aaKnown RBP6.52□□□□□ -1.37
GTF2H3-213ENST00000543415 NFATC2IPQ8NCF5 419 aa6.52□□□□□ -1.37
GTF2H3-213ENST00000543415 NIFKQ9BYG3 293 aaKnown RBP6.52□□□□□ -1.37
GTF2H3-213ENST00000543415 MKL2Q9ULH7 1088 aa6.52□□□□□ -1.37
GTF2H3-213ENST00000543415 PCDHGA11Q9Y5H2 935 aa6.52□□□□□ -1.37
GTF2H3-213ENST00000543415 FGFR3P22607 806 aa6.51□□□□□ -1.37
GTF2H3-213ENST00000543415 PLA2G4AP47712 749 aa6.51□□□□□ -1.37
GTF2H3-213ENST00000543415 NLRP8Q86W28 1048 aa6.51□□□□□ -1.37
GTF2H3-213ENST00000543415 EDARADDQ8WWZ3 215 aa6.51□□□□□ -1.37
GTF2H3-213ENST00000543415 NDFIP2Q9NV92 336 aa6.51□□□□□ -1.37
GTF2H3-213ENST00000543415 TMEM229AB2RXF0 380 aa6.5□□□□□ -1.37
GTF2H3-213ENST00000543415 PIK3R2O00459 728 aa6.5□□□□□ -1.37
GTF2H3-213ENST00000543415 SMTNP53814 917 aa6.5□□□□□ -1.37
GTF2H3-213ENST00000543415 EML3Q32P44 896 aa6.5□□□□□ -1.37
GTF2H3-213ENST00000543415 ABHD17AQ96GS6 310 aa6.5□□□□□ -1.37
GTF2H3-213ENST00000543415 USP17L3A6NCW0 530 aa6.49□□□□□ -1.37
GTF2H3-213ENST00000543415 USP17L4A6NCW7 530 aa6.49□□□□□ -1.37
GTF2H3-213ENST00000543415 SHISA8B8ZZ34 492 aa6.49□□□□□ -1.37
GTF2H3-213ENST00000543415 BNIP3LO60238 219 aa6.49□□□□□ -1.37
GTF2H3-213ENST00000543415 GTF2IP78347 998 aa6.49□□□□□ -1.37
GTF2H3-213ENST00000543415 NBPF1Q3BBV0 1214 aa6.49□□□□□ -1.37
GTF2H3-213ENST00000543415 USP17L2Q6R6M4 530 aa6.49□□□□□ -1.37
GTF2H3-213ENST00000543415 SLCO4C1Q6ZQN7 724 aa6.49□□□□□ -1.37
GTF2H3-213ENST00000543415 USP17L1Q7RTZ2 530 aa6.49□□□□□ -1.37
GTF2H3-213ENST00000543415 SPOCK3Q9BQ16 436 aa6.49□□□□□ -1.37
GTF2H3-213ENST00000543415 RRAGCQ9HB90 399 aa6.49□□□□□ -1.37
GTF2H3-213ENST00000543415 PCDHGC4Q9Y5F7 938 aa6.49□□□□□ -1.37
GTF2H3-213ENST00000543415 ACIN1Q9UKV3 1341 aaKnown RBP6.49□□□□□ -1.37
GTF2H3-213ENST00000543415 ATP9BO43861 1147 aa6.48□□□□□ -1.37
GTF2H3-213ENST00000543415 ARAFP10398 606 aa6.48□□□□□ -1.37
GTF2H3-213ENST00000543415 RFX1P22670 979 aa6.48□□□□□ -1.37
GTF2H3-213ENST00000543415 SNRPNP63162 240 aaKnown RBP6.48□□□□□ -1.37
GTF2H3-213ENST00000543415 C1orf229Q6ZS94 237 aaPredicted RBP6.48□□□□□ -1.37
GTF2H3-213ENST00000543415 PLEKHM2Q8IWE5 1019 aa6.48□□□□□ -1.37
GTF2H3-213ENST00000543415 RETREG2Q8NC44 543 aa6.48□□□□□ -1.37
GTF2H3-213ENST00000543415 AIDAQ96BJ3 306 aa6.48□□□□□ -1.37
GTF2H3-213ENST00000543415 SLC4A9Q96Q91 983 aa6.48□□□□□ -1.37
GTF2H3-213ENST00000543415 ZCCHC2Q9C0B9 1178 aaKnown RBP6.48□□□□□ -1.37
GTF2H3-213ENST00000543415 KIAA1024Q9UPX6 916 aa6.48□□□□□ -1.37
GTF2H3-213ENST00000543415 NOD1Q9Y239 953 aa6.48□□□□□ -1.37
GTF2H3-213ENST00000543415 USP3Q9Y6I4 520 aa6.48□□□□□ -1.37
GTF2H3-213ENST00000543415 CDK2AP1O14519 115 aa6.47□□□□□ -1.37
GTF2H3-213ENST00000543415 C2CD2LO14523 706 aa6.47□□□□□ -1.37
GTF2H3-213ENST00000543415 LZTS3O60299 673 aaPredicted RBP6.47□□□□□ -1.37
GTF2H3-213ENST00000543415 TATP17735 454 aaPredicted RBP6.47□□□□□ -1.37
GTF2H3-213ENST00000543415 AMPD1P23109 780 aa6.47□□□□□ -1.37
GTF2H3-213ENST00000543415 CTBSQ01459 385 aa6.47□□□□□ -1.37
GTF2H3-213ENST00000543415 DNAAF2Q9NVR5 837 aaKnown RBP6.47□□□□□ -1.37
GTF2H3-213ENST00000543415 ZDHHC3Q9NYG2 299 aa6.47□□□□□ -1.37
GTF2H3-213ENST00000543415 SERTAD1Q9UHV2 236 aa6.47□□□□□ -1.37
GTF2H3-213ENST00000543415 GGA1Q9UJY5 639 aa6.47□□□□□ -1.37
GTF2H3-213ENST00000543415 A6NJY4 79 aa6.46□□□□□ -1.38
GTF2H3-213ENST00000543415 BACH1O14867 736 aa6.46□□□□□ -1.38
GTF2H3-213ENST00000543415 ATXN7O15265 892 aaPredicted RBP6.46□□□□□ -1.38
GTF2H3-213ENST00000543415 PPP1R15AO75807 674 aaPredicted RBP6.46□□□□□ -1.38
GTF2H3-213ENST00000543415 ITGB2P05107 769 aa6.46□□□□□ -1.38
GTF2H3-213ENST00000543415 ATP4AP20648 1035 aa6.46□□□□□ -1.38
GTF2H3-213ENST00000543415 CLDN10P78369 228 aa6.46□□□□□ -1.38
GTF2H3-213ENST00000543415 MTFR1Q15390 333 aa6.46□□□□□ -1.38
GTF2H3-213ENST00000543415 ARSJQ5FYB0 599 aaPredicted RBP6.46□□□□□ -1.38
GTF2H3-213ENST00000543415 FAM182BQ5T319 152 aa6.46□□□□□ -1.38
GTF2H3-213ENST00000543415 ZNF295-AS1Q8N0V1 137 aa6.46□□□□□ -1.38
GTF2H3-213ENST00000543415 TFIP11Q9UBB9 837 aaKnown RBP6.46□□□□□ -1.38
GTF2H3-213ENST00000543415 A0A1W2PNR3 127 aa6.45□□□□□ -1.38
GTF2H3-213ENST00000543415 PALM3A6NDB9 673 aaPredicted RBP6.45□□□□□ -1.38
GTF2H3-213ENST00000543415 ZBTB7BO15156 539 aaPredicted RBP6.45□□□□□ -1.38
GTF2H3-213ENST00000543415 PROCP04070 461 aa6.45□□□□□ -1.38
GTF2H3-213ENST00000543415 EPXP11678 715 aa6.45□□□□□ -1.38
GTF2H3-213ENST00000543415 AEBP1Q8IUX7 1158 aa6.45□□□□□ -1.38
GTF2H3-213ENST00000543415 SERBP1Q8NC51 408 aaKnown RBP eCLIP6.45□□□□□ -1.38
GTF2H3-213ENST00000543415 BTBD6Q96KE9 485 aa6.45□□□□□ -1.38
GTF2H3-213ENST00000543415 AVENQ9NQS1 362 aaPredicted RBP6.45□□□□□ -1.38
GTF2H3-213ENST00000543415 ZNF358Q9NW07 568 aa6.45□□□□□ -1.38
GTF2H3-213ENST00000543415 IQSEC3Q9UPP2 1182 aaPredicted RBP6.45□□□□□ -1.38
GTF2H3-213ENST00000543415 MAFBQ9Y5Q3 323 aaPredicted RBP6.45□□□□□ -1.38
GTF2H3-213ENST00000543415 GNB5O14775 395 aa6.44□□□□□ -1.38
GTF2H3-213ENST00000543415 ADH6P28332 368 aa6.44□□□□□ -1.38
GTF2H3-213ENST00000543415 TNP2Q05952 138 aa6.44□□□□□ -1.38
GTF2H3-213ENST00000543415 PSME1Q06323 249 aa6.44□□□□□ -1.38
GTF2H3-213ENST00000543415 PBXIP1Q96AQ6 731 aa6.44□□□□□ -1.38
GTF2H3-213ENST00000543415 TRAIPQ9BWF2 469 aa6.44□□□□□ -1.38
GTF2H3-213ENST00000543415 CABP1Q9NZU7 370 aa6.44□□□□□ -1.38
GTF2H3-213ENST00000543415 GJA3Q9Y6H8 435 aa6.44□□□□□ -1.38
GTF2H3-213ENST00000543415 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP6.43□□□□□ -1.38
GTF2H3-213ENST00000543415 KRBA1A5PL33 1030 aa6.43□□□□□ -1.38
GTF2H3-213ENST00000543415 NEURL1BA8MQ27 555 aa6.43□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 57.4 ms