RNA–Protein interactions for RNA: ENST00000543309.5

TRIM65-204, Transcript of tripartite motif containing 65, humanhuman

TSL 2

Gene TRIM65, Length 865 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM65-204ENST00000543309 HDGFL1Q5TGJ6 251 aa20.57■□□□□ 0.88
TRIM65-204ENST00000543309 PTF1AQ7RTS3 328 aa20.57■□□□□ 0.88
TRIM65-204ENST00000543309 SSH1Q8WYL5 1049 aa20.57■□□□□ 0.88
TRIM65-204ENST00000543309 RBM42Q9BTD8 480 aaKnown RBP20.56■□□□□ 0.88
TRIM65-204ENST00000543309 SPON1Q9HCB6 807 aa20.56■□□□□ 0.88
TRIM65-204ENST00000543309 SMC4Q9NTJ3 1288 aa20.56■□□□□ 0.88
TRIM65-204ENST00000543309 ERBB4Q15303 1308 aa20.55■□□□□ 0.88
TRIM65-204ENST00000543309 KIF16BQ96L93 1317 aa20.55■□□□□ 0.88
TRIM65-204ENST00000543309 LOC102724428A0A0B4J2F2 783 aa20.55■□□□□ 0.88
TRIM65-204ENST00000543309 SIK1P57059 783 aa20.55■□□□□ 0.88
TRIM65-204ENST00000543309 STK31Q9BXU1 1019 aa20.55■□□□□ 0.88
TRIM65-204ENST00000543309 ANO8Q9HCE9 1232 aaPredicted RBP20.55■□□□□ 0.88
TRIM65-204ENST00000543309 SLC4A9Q96Q91 983 aa20.54■□□□□ 0.88
TRIM65-204ENST00000543309 COL5A3P25940 1745 aaPredicted RBP20.53■□□□□ 0.88
TRIM65-204ENST00000543309 PRAMEF22A3QJZ6 481 aa20.53■□□□□ 0.88
TRIM65-204ENST00000543309 BCAR3O75815 825 aa20.53■□□□□ 0.88
TRIM65-204ENST00000543309 MRPL50Q8N5N7 158 aaKnown RBP20.53■□□□□ 0.88
TRIM65-204ENST00000543309 DBF4Q9UBU7 674 aaPredicted RBP20.53■□□□□ 0.88
TRIM65-204ENST00000543309 PPP1R1BQ9UD71 204 aaPredicted RBP20.53■□□□□ 0.88
TRIM65-204ENST00000543309 USP16Q9Y5T5 823 aa20.53■□□□□ 0.88
TRIM65-204ENST00000543309 STARD3NLO95772 234 aa20.52■□□□□ 0.88
TRIM65-204ENST00000543309 EIF2S2P20042 333 aaKnown RBP20.52■□□□□ 0.88
TRIM65-204ENST00000543309 GOLGA6L2Q8N9W4 650 aaPredicted RBP20.52■□□□□ 0.88
TRIM65-204ENST00000543309 SUPT16HQ9Y5B9 1047 aaKnown RBP20.52■□□□□ 0.88
TRIM65-204ENST00000543309 HMGB2P26583 209 aaKnown RBP20.51■□□□□ 0.87
TRIM65-204ENST00000543309 ATP6V1AP38606 617 aa20.51■□□□□ 0.87
TRIM65-204ENST00000543309 BCL2L13Q9BXK5 485 aa20.51■□□□□ 0.87
TRIM65-204ENST00000543309 SLC4A2P04920 1241 aa20.5■□□□□ 0.87
TRIM65-204ENST00000543309 RRP1P56182 461 aaKnown RBP20.5■□□□□ 0.87
TRIM65-204ENST00000543309 DNAJC10Q8IXB1 793 aa20.5■□□□□ 0.87
TRIM65-204ENST00000543309 ARHGAP45Q92619 1136 aa20.5■□□□□ 0.87
TRIM65-204ENST00000543309 DDX21Q9NR30 783 aaKnown RBP eCLIP20.5■□□□□ 0.87
TRIM65-204ENST00000543309 IPO8O15397 1037 aaKnown RBP20.49■□□□□ 0.87
TRIM65-204ENST00000543309 CYP19A1P11511 503 aaPredicted RBP20.49■□□□□ 0.87
TRIM65-204ENST00000543309 HYPKQ9NX55 129 aa20.49■□□□□ 0.87
TRIM65-204ENST00000543309 CHPF2Q9P2E5 772 aa20.49■□□□□ 0.87
TRIM65-204ENST00000543309 TAF1LQ8IZX4 1826 aa20.48■□□□□ 0.87
TRIM65-204ENST00000543309 PDIA6Q15084 440 aa20.48■□□□□ 0.87
TRIM65-204ENST00000543309 SLC27A3Q5K4L6 730 aa20.48■□□□□ 0.87
TRIM65-204ENST00000543309 NECTIN2Q92692 538 aa20.48■□□□□ 0.87
TRIM65-204ENST00000543309 PTPRCP08575 1304 aa20.48■□□□□ 0.87
TRIM65-204ENST00000543309 ITPK1Q13572 414 aa20.47■□□□□ 0.87
TRIM65-204ENST00000543309 PROM2Q8N271 834 aa20.47■□□□□ 0.87
TRIM65-204ENST00000543309 CCNL1Q9UK58 526 aaPredicted RBP20.47■□□□□ 0.87
TRIM65-204ENST00000543309 TCERG1O14776 1098 aaKnown RBP20.46■□□□□ 0.87
TRIM65-204ENST00000543309 ZKSCAN2Q63HK3 967 aa20.46■□□□□ 0.87
TRIM65-204ENST00000543309 MS4A1P11836 297 aa20.45■□□□□ 0.86
TRIM65-204ENST00000543309 NOB1Q9ULX3 412 aaKnown RBP20.45■□□□□ 0.86
TRIM65-204ENST00000543309 CNTNAP4Q9C0A0 1308 aa20.45■□□□□ 0.86
TRIM65-204ENST00000543309 NBPF26B4DH59 902 aa20.44■□□□□ 0.86
TRIM65-204ENST00000543309 YY1P25490 414 aa20.44■□□□□ 0.86
TRIM65-204ENST00000543309 CANXP27824 592 aaKnown RBP20.44■□□□□ 0.86
TRIM65-204ENST00000543309 FLIIQ13045 1269 aa20.44■□□□□ 0.86
TRIM65-204ENST00000543309 TXNRD1Q16881 649 aa20.44■□□□□ 0.86
TRIM65-204ENST00000543309 RC3H1Q5TC82 1133 aaKnown RBP20.44■□□□□ 0.86
TRIM65-204ENST00000543309 NBPF10Q6P3W6 841 aaKnown RBP20.44■□□□□ 0.86
TRIM65-204ENST00000543309 ATF7IPQ6VMQ6 1270 aa20.44■□□□□ 0.86
TRIM65-204ENST00000543309 LRP10Q7Z4F1 713 aa20.44■□□□□ 0.86
TRIM65-204ENST00000543309 NBPF15Q8N660 670 aa20.44■□□□□ 0.86
TRIM65-204ENST00000543309 FRAT1Q92837 279 aaPredicted RBP20.44■□□□□ 0.86
TRIM65-204ENST00000543309 CCDC87Q9NVE4 849 aa20.44■□□□□ 0.86
TRIM65-204ENST00000543309 A1BGP04217 495 aa20.43■□□□□ 0.86
TRIM65-204ENST00000543309 CRKLP46109 303 aaKnown RBP20.43■□□□□ 0.86
TRIM65-204ENST00000543309 PDE3AQ14432 1141 aa20.43■□□□□ 0.86
TRIM65-204ENST00000543309 PROSER3Q2NL68 480 aa20.43■□□□□ 0.86
TRIM65-204ENST00000543309 API5Q9BZZ5 524 aaKnown RBP20.43■□□□□ 0.86
TRIM65-204ENST00000543309 PDGFDQ9GZP0 370 aaPredicted RBP20.43■□□□□ 0.86
TRIM65-204ENST00000543309 C4BP0C0L5 1744 aa20.42■□□□□ 0.86
TRIM65-204ENST00000543309 TRIM27P14373 513 aa20.42■□□□□ 0.86
TRIM65-204ENST00000543309 G2E3Q7L622 706 aa20.42■□□□□ 0.86
TRIM65-204ENST00000543309 LINC00116Q8NCU8 138 aa20.42■□□□□ 0.86
TRIM65-204ENST00000543309 STK32BQ9NY57 414 aa20.42■□□□□ 0.86
TRIM65-204ENST00000543309 MYH14Q7Z406 1995 aaKnown RBP20.41■□□□□ 0.86
TRIM65-204ENST00000543309 PLIN1O60240 522 aa20.41■□□□□ 0.86
TRIM65-204ENST00000543309 IL6STP40189 918 aaPredicted RBP20.41■□□□□ 0.86
TRIM65-204ENST00000543309 INTS5Q6P9B9 1019 aaKnown RBP20.41■□□□□ 0.86
TRIM65-204ENST00000543309 PHAXQ9H814 394 aaKnown RBP20.41■□□□□ 0.86
TRIM65-204ENST00000543309 PXDNLA1KZ92 1463 aa20.4■□□□□ 0.86
TRIM65-204ENST00000543309 DCAF8L1A6NGE4 600 aa20.4■□□□□ 0.86
TRIM65-204ENST00000543309 ZBTB7AO95365 584 aa20.4■□□□□ 0.86
TRIM65-204ENST00000543309 ANXA1P04083 346 aa20.4■□□□□ 0.86
TRIM65-204ENST00000543309 MYL6BP14649 208 aa20.4■□□□□ 0.86
TRIM65-204ENST00000543309 N4BP2Q86UW6 1770 aaPredicted RBP20.4■□□□□ 0.86
TRIM65-204ENST00000543309 ZBTB1Q9Y2K1 713 aa20.4■□□□□ 0.86
TRIM65-204ENST00000543309 DDX58O95786 925 aaKnown RBP20.39■□□□□ 0.85
TRIM65-204ENST00000543309 PTGER2P43116 358 aa20.39■□□□□ 0.85
TRIM65-204ENST00000543309 FKBP5Q13451 457 aaPredicted RBP20.39■□□□□ 0.85
TRIM65-204ENST00000543309 SLC15A2Q16348 729 aa20.39■□□□□ 0.85
TRIM65-204ENST00000543309 LRRC4BQ9NT99 713 aa20.39■□□□□ 0.85
TRIM65-204ENST00000543309 ABCC4O15439 1325 aa20.38■□□□□ 0.85
TRIM65-204ENST00000543309 NEFLP07196 543 aa20.38■□□□□ 0.85
TRIM65-204ENST00000543309 DZIP1LQ8IYY4 767 aaKnown RBP20.38■□□□□ 0.85
TRIM65-204ENST00000543309 PIP4K2AP48426 406 aaPredicted RBP20.37■□□□□ 0.85
TRIM65-204ENST00000543309 EIF5P55010 431 aaKnown RBP20.37■□□□□ 0.85
TRIM65-204ENST00000543309 KCNQ4P56696 695 aa20.37■□□□□ 0.85
TRIM65-204ENST00000543309 COPS6Q7L5N1 327 aa20.37■□□□□ 0.85
TRIM65-204ENST00000543309 FTSJ3Q8IY81 847 aaKnown RBP20.37■□□□□ 0.85
TRIM65-204ENST00000543309 XAGE3Q8WTP9 111 aa20.37■□□□□ 0.85
TRIM65-204ENST00000543309 QSER1Q2KHR3 1735 aa20.36■□□□□ 0.85
TRIM65-204ENST00000543309 KSR2Q6VAB6 950 aa20.36■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 12.3 ms