RNA–Protein interactions for RNA: ENST00000543264.6

SHD-201, Transcript of Src homology 2 domain containing transforming protein D, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SHD, Length 2,577 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHD-201ENST00000543264 UTP14CQ5TAP6 766 aaKnown RBP28.46■■■□□ 2.15
SHD-201ENST00000543264 CYB5RLQ6IPT4 315 aa28.46■■■□□ 2.15
SHD-201ENST00000543264 PYCARDQ9ULZ3 195 aa28.46■■■□□ 2.15
SHD-201ENST00000543264 KIAA1524Q8TCG1 905 aa28.46■■■□□ 2.15
SHD-201ENST00000543264 ZSCAN21Q9Y5A6 473 aaPredicted RBP28.46■■■□□ 2.15
SHD-201ENST00000543264 RUFY3Q7L099 469 aa28.45■■■□□ 2.15
SHD-201ENST00000543264 FUCA2Q9BTY2 467 aa28.45■■■□□ 2.15
SHD-201ENST00000543264 LIMCH1Q9UPQ0 1083 aa28.45■■■□□ 2.15
SHD-201ENST00000543264 MTHFSDQ2M296 383 aaKnown RBP28.45■■■□□ 2.14
SHD-201ENST00000543264 RASEFQ8IZ41 740 aa28.45■■■□□ 2.14
SHD-201ENST00000543264 TTC14Q96N46 770 aa28.45■■■□□ 2.14
SHD-201ENST00000543264 KCNF1Q9H3M0 494 aa28.45■■■□□ 2.14
SHD-201ENST00000543264 ATP6V1DQ9Y5K8 247 aa28.44■■■□□ 2.14
SHD-201ENST00000543264 CPA1P15085 419 aa28.43■■■□□ 2.14
SHD-201ENST00000543264 DNM1Q05193 864 aaKnown RBP28.43■■■□□ 2.14
SHD-201ENST00000543264 RAD50Q92878 1312 aa28.43■■■□□ 2.14
SHD-201ENST00000543264 RIOK3O14730 519 aaKnown RBP28.42■■■□□ 2.14
SHD-201ENST00000543264 EPB41L2O43491 1005 aaKnown RBP28.42■■■□□ 2.14
SHD-201ENST00000543264 CHAF1AQ13111 956 aaPredicted RBP28.42■■■□□ 2.14
SHD-201ENST00000543264 SPDYE4A6NLX3 237 aa28.42■■■□□ 2.14
SHD-201ENST00000543264 SGSM2O43147 1006 aa28.42■■■□□ 2.14
SHD-201ENST00000543264 PDCL2Q8N4E4 241 aa28.42■■■□□ 2.14
SHD-201ENST00000543264 DIAPH3Q9NSV4 1193 aa28.42■■■□□ 2.14
SHD-201ENST00000543264 AOX1Q06278 1338 aa28.4■■■□□ 2.14
SHD-201ENST00000543264 SURF6O75683 361 aaKnown RBP28.39■■■□□ 2.14
SHD-201ENST00000543264 LARGE1O95461 756 aa28.39■■■□□ 2.14
SHD-201ENST00000543264 CCDC83Q8IWF9 413 aa28.39■■■□□ 2.14
SHD-201ENST00000543264 LSG1Q9H089 658 aaKnown RBP28.39■■■□□ 2.14
SHD-201ENST00000543264 CCDC30Q5VVM6 783 aa28.39■■■□□ 2.13
SHD-201ENST00000543264 USP44Q9H0E7 712 aa28.39■■■□□ 2.13
SHD-201ENST00000543264 SPG7Q9UQ90 795 aa28.39■■■□□ 2.13
SHD-201ENST00000543264 NEO1Q92859 1461 aa28.39■■■□□ 2.13
SHD-201ENST00000543264 NRKQ7Z2Y5 1582 aa28.38■■■□□ 2.13
SHD-201ENST00000543264 MAP3K19Q56UN5 1328 aa28.38■■■□□ 2.13
SHD-201ENST00000543264 UBTFL1P0CB47 393 aaPredicted RBP28.38■■■□□ 2.13
SHD-201ENST00000543264 GJB2P29033 226 aa28.38■■■□□ 2.13
SHD-201ENST00000543264 RIMBP3CA6NJZ7 1639 aa28.38■■■□□ 2.13
SHD-201ENST00000543264 RIMBP3BA6NNM3 1639 aa28.38■■■□□ 2.13
SHD-201ENST00000543264 RIMBP3Q9UFD9 1639 aa28.38■■■□□ 2.13
SHD-201ENST00000543264 TTC21BQ7Z4L5 1316 aa28.38■■■□□ 2.13
SHD-201ENST00000543264 PRR36Q9H6K5 1346 aa28.38■■■□□ 2.13
SHD-201ENST00000543264 MON2Q7Z3U7 1717 aa28.38■■■□□ 2.13
SHD-201ENST00000543264 CASTP20810 708 aaKnown RBP28.38■■■□□ 2.13
SHD-201ENST00000543264 CWC27Q6UX04 472 aaKnown RBP28.38■■■□□ 2.13
SHD-201ENST00000543264 METP08581 1390 aa28.37■■■□□ 2.13
SHD-201ENST00000543264 SOS1Q07889 1333 aaPredicted RBP28.37■■■□□ 2.13
SHD-201ENST00000543264 TPM3P06753 285 aa28.37■■■□□ 2.13
SHD-201ENST00000543264 PI4K2BQ8TCG2 481 aa28.37■■■□□ 2.13
SHD-201ENST00000543264 GOLGA6L6A8MZA4 724 aa28.36■■■□□ 2.13
SHD-201ENST00000543264 CHMP3Q9Y3E7 222 aa28.36■■■□□ 2.13
SHD-201ENST00000543264 NUTM2FA1L443 756 aa28.36■■■□□ 2.13
SHD-201ENST00000543264 MTMR6Q9Y217 621 aa28.36■■■□□ 2.13
SHD-201ENST00000543264 C3P01024 1663 aa28.35■■■□□ 2.13
SHD-201ENST00000543264 CCDC192P0DO97 292 aa28.35■■■□□ 2.13
SHD-201ENST00000543264 ARHGEF10O15013 1369 aa28.34■■■□□ 2.13
SHD-201ENST00000543264 VPS37CA5D8V6 355 aaPredicted RBP28.34■■■□□ 2.13
SHD-201ENST00000543264 PPP1R42Q7Z4L9 355 aa28.34■■■□□ 2.13
SHD-201ENST00000543264 SSH3Q8TE77 659 aa28.34■■■□□ 2.13
SHD-201ENST00000543264 GTPBP4Q9BZE4 634 aaKnown RBP28.34■■■□□ 2.13
SHD-201ENST00000543264 CNTROBQ8N137 903 aa28.34■■■□□ 2.13
SHD-201ENST00000543264 RHPN1Q8TCX5 695 aa28.34■■■□□ 2.13
SHD-201ENST00000543264 U2AF2P26368 475 aaKnown RBP eCLIP28.33■■■□□ 2.13
SHD-201ENST00000543264 HYPKQ9NX55 129 aa28.33■■■□□ 2.13
SHD-201ENST00000543264 A2ML1A8K2U0 1454 aa28.33■■■□□ 2.12
SHD-201ENST00000543264 PTGS1P23219 599 aa28.32■■■□□ 2.12
SHD-201ENST00000543264 RAB11FIP3O75154 756 aa28.32■■■□□ 2.12
SHD-201ENST00000543264 CAMK4Q16566 473 aa28.31■■■□□ 2.12
SHD-201ENST00000543264 ANKRD7Q92527 254 aa28.31■■■□□ 2.12
SHD-201ENST00000543264 PDRG1Q9NUG6 133 aa28.3■■■□□ 2.12
SHD-201ENST00000543264 DDX54Q8TDD1 881 aaKnown RBP28.3■■■□□ 2.12
SHD-201ENST00000543264 JAKMIP1Q96N16 626 aaKnown RBP28.3■■■□□ 2.12
SHD-201ENST00000543264 ACEP12821 1306 aa28.3■■■□□ 2.12
SHD-201ENST00000543264 SETD1AO15047 1707 aaKnown RBP28.29■■■□□ 2.12
SHD-201ENST00000543264 ADCK5Q3MIX3 580 aa28.29■■■□□ 2.12
SHD-201ENST00000543264 ITSN1Q15811 1721 aa28.29■■■□□ 2.12
SHD-201ENST00000543264 AKAP12Q02952 1782 aa28.29■■■□□ 2.12
SHD-201ENST00000543264 SRGAP3O43295 1099 aa28.28■■■□□ 2.12
SHD-201ENST00000543264 CTIFO43310 598 aaKnown RBP28.28■■■□□ 2.12
SHD-201ENST00000543264 LUZP1Q86V48 1076 aa28.28■■■□□ 2.12
SHD-201ENST00000543264 FAM200AQ8TCP9 573 aa28.28■■■□□ 2.12
SHD-201ENST00000543264 NECAB1Q8N987 351 aa28.27■■■□□ 2.12
SHD-201ENST00000543264 KIF1BPQ96EK5 621 aa28.27■■■□□ 2.12
SHD-201ENST00000543264 RIMS1Q86UR5 1692 aaKnown RBP28.27■■■□□ 2.12
SHD-201ENST00000543264 RICTORQ6R327 1708 aa28.27■■■□□ 2.12
SHD-201ENST00000543264 PEAK1Q9H792 1746 aa28.27■■■□□ 2.12
SHD-201ENST00000543264 PRPF40BQ6NWY9 871 aaKnown RBP28.27■■■□□ 2.12
SHD-201ENST00000543264 PTH1RQ03431 593 aa28.26■■■□□ 2.11
SHD-201ENST00000543264 DRC7Q8IY82 874 aa28.26■■■□□ 2.11
SHD-201ENST00000543264 KLHL34Q8N239 644 aa28.26■■■□□ 2.11
SHD-201ENST00000543264 MAP3K11Q16584 847 aa28.26■■■□□ 2.11
SHD-201ENST00000543264 CCDC186Q7Z3E2 898 aa28.26■■■□□ 2.11
SHD-201ENST00000543264 FERMT3Q86UX7 667 aa28.26■■■□□ 2.11
SHD-201ENST00000543264 PHAXQ9H814 394 aaKnown RBP28.26■■■□□ 2.11
SHD-201ENST00000543264 VPS53Q5VIR6 699 aa28.25■■■□□ 2.11
SHD-201ENST00000543264 TTC6Q86TZ1 520 aa28.25■■■□□ 2.11
SHD-201ENST00000543264 XRN1Q8IZH2 1706 aaKnown RBP28.25■■■□□ 2.11
SHD-201ENST00000543264 IGSF3O75054 1194 aa28.25■■■□□ 2.11
SHD-201ENST00000543264 LIG1P18858 919 aa28.25■■■□□ 2.11
SHD-201ENST00000543264 TYRO3Q06418 890 aa28.25■■■□□ 2.11
SHD-201ENST00000543264 POLA2Q14181 598 aa28.25■■■□□ 2.11
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms