RNA–Protein interactions for RNA: ENST00000543079.1

PAAF1-212, Transcript of proteasomal ATPase associated factor 1, humanhuman

TSL 3

Gene PAAF1, Length 390 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PAAF1-212ENST00000543079 CYLDQ9NQC7 956 aa10.67□□□□□ -0.7
PAAF1-212ENST00000543079 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP10.67□□□□□ -0.7
PAAF1-212ENST00000543079 POLMQ9NP87 494 aaPredicted RBP10.66□□□□□ -0.7
PAAF1-212ENST00000543079 EFCAB2Q5VUJ9 269 aa10.65□□□□□ -0.7
PAAF1-212ENST00000543079 RNF217Q8TC41 542 aa10.65□□□□□ -0.7
PAAF1-212ENST00000543079 CCDC18Q5T9S5 1454 aa10.65□□□□□ -0.7
PAAF1-212ENST00000543079 CFAP74Q9C0B2 1584 aa10.65□□□□□ -0.71
PAAF1-212ENST00000543079 SLC35F4A4IF30 521 aa10.64□□□□□ -0.71
PAAF1-212ENST00000543079 LORP23490 312 aaPredicted RBP10.64□□□□□ -0.71
PAAF1-212ENST00000543079 CCDC155Q8N6L0 562 aa10.64□□□□□ -0.71
PAAF1-212ENST00000543079 ZSCAN1Q8NBB4 408 aa10.64□□□□□ -0.71
PAAF1-212ENST00000543079 PRM3Q9NNZ6 103 aa10.64□□□□□ -0.71
PAAF1-212ENST00000543079 PLCH2O75038 1416 aa10.64□□□□□ -0.71
PAAF1-212ENST00000543079 MAP3K1Q13233 1512 aa10.63□□□□□ -0.71
PAAF1-212ENST00000543079 C3P01024 1663 aa10.63□□□□□ -0.71
PAAF1-212ENST00000543079 ERVK-9P63128 1117 aa10.63□□□□□ -0.71
PAAF1-212ENST00000543079 KANK4Q5T7N3 995 aaPredicted RBP10.63□□□□□ -0.71
PAAF1-212ENST00000543079 TIAM1Q13009 1591 aa10.62□□□□□ -0.71
PAAF1-212ENST00000543079 ATP5J2-PTCD1G3V325 749 aa10.62□□□□□ -0.71
PAAF1-212ENST00000543079 CC2D2BQ6DHV5 1058 aa10.62□□□□□ -0.71
PAAF1-212ENST00000543079 ZMYM3Q14202 1370 aa10.62□□□□□ -0.71
PAAF1-212ENST00000543079 FOXD4L5Q5VV16 416 aaPredicted RBP10.61□□□□□ -0.71
PAAF1-212ENST00000543079 NANOS1Q8WY41 292 aaKnown RBP10.61□□□□□ -0.71
PAAF1-212ENST00000543079 TBC1D2BQ9UPU7 963 aa10.61□□□□□ -0.71
PAAF1-212ENST00000543079 TROQ12816 1431 aaPredicted RBP10.6□□□□□ -0.71
PAAF1-212ENST00000543079 FAM181BA6NEQ2 426 aa10.6□□□□□ -0.71
PAAF1-212ENST00000543079 RNF144AP50876 292 aaPredicted RBP10.6□□□□□ -0.71
PAAF1-212ENST00000543079 CDK11AQ9UQ88 783 aaPredicted RBP10.6□□□□□ -0.71
PAAF1-212ENST00000543079 LRRC9Q6ZRR7 1453 aa10.6□□□□□ -0.71
PAAF1-212ENST00000543079 NPATQ14207 1427 aa10.59□□□□□ -0.71
PAAF1-212ENST00000543079 CNTLNQ9NXG0 1405 aa10.59□□□□□ -0.71
PAAF1-212ENST00000543079 LYSMD3Q7Z3D4 306 aa10.59□□□□□ -0.71
PAAF1-212ENST00000543079 CEP126Q9P2H0 1117 aa10.59□□□□□ -0.71
PAAF1-212ENST00000543079 PCDHB11Q9Y5F2 797 aa10.59□□□□□ -0.71
PAAF1-212ENST00000543079 TCOF1Q13428 1488 aaKnown RBP10.59□□□□□ -0.71
PAAF1-212ENST00000543079 PTPRKQ15262 1439 aa10.58□□□□□ -0.72
PAAF1-212ENST00000543079 PLA2R1Q13018 1463 aa10.58□□□□□ -0.72
PAAF1-212ENST00000543079 GPR161Q8N6U8 529 aaKnown RBP10.58□□□□□ -0.72
PAAF1-212ENST00000543079 SHANK2Q9UPX8 1470 aa10.57□□□□□ -0.72
PAAF1-212ENST00000543079 MTUS2Q5JR59 1369 aa10.57□□□□□ -0.72
PAAF1-212ENST00000543079 SENP3-EIF4A1A0A087X0R7 540 aa10.57□□□□□ -0.72
PAAF1-212ENST00000543079 ITGA6P23229 1130 aa10.57□□□□□ -0.72
PAAF1-212ENST00000543079 GPC1P35052 558 aa10.57□□□□□ -0.72
PAAF1-212ENST00000543079 SCTRP47872 440 aa10.57□□□□□ -0.72
PAAF1-212ENST00000543079 IRF5Q13568 498 aa10.57□□□□□ -0.72
PAAF1-212ENST00000543079 ZNF518AQ6AHZ1 1483 aa10.56□□□□□ -0.72
PAAF1-212ENST00000543079 A0A1W2PRU2 124 aa10.56□□□□□ -0.72
PAAF1-212ENST00000543079 EIF4G2P78344 907 aaKnown RBP eCLIP10.56□□□□□ -0.72
PAAF1-212ENST00000543079 CYP2U1Q7Z449 544 aa10.56□□□□□ -0.72
PAAF1-212ENST00000543079 CPS1P31327 1500 aa10.56□□□□□ -0.72
PAAF1-212ENST00000543079 AGLP35573 1532 aa10.56□□□□□ -0.72
PAAF1-212ENST00000543079 KIF14Q15058 1648 aa10.55□□□□□ -0.72
PAAF1-212ENST00000543079 ALKQ9UM73 1620 aa10.55□□□□□ -0.72
PAAF1-212ENST00000543079 EHBP1L1Q8N3D4 1523 aa10.55□□□□□ -0.72
PAAF1-212ENST00000543079 TRAK2O60296 914 aa10.55□□□□□ -0.72
PAAF1-212ENST00000543079 PPARGC1BQ86YN6 1023 aaKnown RBP10.55□□□□□ -0.72
PAAF1-212ENST00000543079 OSBPL3Q9H4L5 887 aa10.55□□□□□ -0.72
PAAF1-212ENST00000543079 DIP2CQ9Y2E4 1556 aa10.55□□□□□ -0.72
PAAF1-212ENST00000543079 MEN1O00255 615 aa10.54□□□□□ -0.72
PAAF1-212ENST00000543079 PRICKLE2Q7Z3G6 844 aa10.54□□□□□ -0.72
PAAF1-212ENST00000543079 VWA5B2Q8N398 1253 aa10.53□□□□□ -0.72
PAAF1-212ENST00000543079 GDPD2Q9HCC8 539 aa10.53□□□□□ -0.72
PAAF1-212ENST00000543079 REREQ9P2R6 1566 aa10.52□□□□□ -0.72
PAAF1-212ENST00000543079 KRT76Q01546 638 aa10.52□□□□□ -0.73
PAAF1-212ENST00000543079 CLN3Q13286 438 aa10.52□□□□□ -0.73
PAAF1-212ENST00000543079 SV2AQ7L0J3 742 aa10.52□□□□□ -0.73
PAAF1-212ENST00000543079 PHTF2Q8N3S3 785 aa10.52□□□□□ -0.73
PAAF1-212ENST00000543079 NLRP3Q96P20 1036 aa10.52□□□□□ -0.73
PAAF1-212ENST00000543079 CCDC85AQ96PX6 553 aaPredicted RBP10.52□□□□□ -0.73
PAAF1-212ENST00000543079 NCOA2Q15596 1464 aa10.52□□□□□ -0.73
PAAF1-212ENST00000543079 MLH3Q9UHC1 1453 aa10.52□□□□□ -0.73
PAAF1-212ENST00000543079 CNTNAP3BQ96NU0 1288 aa10.51□□□□□ -0.73
PAAF1-212ENST00000543079 COL25A1Q9BXS0 654 aaPredicted RBP10.51□□□□□ -0.73
PAAF1-212ENST00000543079 CNTNAP3Q9BZ76 1288 aa10.51□□□□□ -0.73
PAAF1-212ENST00000543079 GRIP2Q9C0E4 1043 aa10.51□□□□□ -0.73
PAAF1-212ENST00000543079 KDM5CP41229 1560 aa10.51□□□□□ -0.73
PAAF1-212ENST00000543079 GPATCH8Q9UKJ3 1502 aaKnown RBP10.5□□□□□ -0.73
PAAF1-212ENST00000543079 ANKLE2Q86XL3 938 aa10.5□□□□□ -0.73
PAAF1-212ENST00000543079 CDCA7Q9BWT1 371 aaPredicted RBP10.5□□□□□ -0.73
PAAF1-212ENST00000543079 CEP170BQ9Y4F5 1589 aaPredicted RBP10.49□□□□□ -0.73
PAAF1-212ENST00000543079 ABCA6Q8N139 1617 aa10.49□□□□□ -0.73
PAAF1-212ENST00000543079 CDC14CA4D256 554 aa10.49□□□□□ -0.73
PAAF1-212ENST00000543079 MYCP01106 439 aaPredicted RBP10.49□□□□□ -0.73
PAAF1-212ENST00000543079 GNRH1P01148 92 aa10.49□□□□□ -0.73
PAAF1-212ENST00000543079 RHOQP17081 205 aa10.49□□□□□ -0.73
PAAF1-212ENST00000543079 VAC14Q08AM6 782 aa10.49□□□□□ -0.73
PAAF1-212ENST00000543079 MCM6Q14566 821 aa10.49□□□□□ -0.73
PAAF1-212ENST00000543079 WASHC4Q2M389 1173 aa10.49□□□□□ -0.73
PAAF1-212ENST00000543079 SLC27A3Q5K4L6 730 aa10.49□□□□□ -0.73
PAAF1-212ENST00000543079 ARHGEF10LQ9HCE6 1279 aa10.49□□□□□ -0.73
PAAF1-212ENST00000543079 SUPT6HQ7KZ85 1726 aaKnown RBP10.49□□□□□ -0.73
PAAF1-212ENST00000543079 ABL2P42684 1182 aa10.48□□□□□ -0.73
PAAF1-212ENST00000543079 TSGA10IPQ3SY00 556 aa10.48□□□□□ -0.73
PAAF1-212ENST00000543079 SLFNL1Q499Z3 407 aa10.48□□□□□ -0.73
PAAF1-212ENST00000543079 GGT6Q6P531 493 aa10.48□□□□□ -0.73
PAAF1-212ENST00000543079 CCNB3Q8WWL7 1395 aa10.48□□□□□ -0.73
PAAF1-212ENST00000543079 RNFT1Q5M7Z0 435 aa10.47□□□□□ -0.73
PAAF1-212ENST00000543079 CHIC2Q9UKJ5 165 aa10.47□□□□□ -0.73
PAAF1-212ENST00000543079 SPATA31C2B4DYI2 1134 aa10.46□□□□□ -0.73
PAAF1-212ENST00000543079 POU4F2Q12837 409 aa10.46□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms