RNA–Protein interactions for RNA: ENST00000543025.5

KDM2B-216, Transcript of lysine demethylase 2B, humanhuman

TSL 1 (best)

Gene KDM2B, Length 2,522 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KDM2B-216ENST00000543025 TSHZ3Q63HK5 1081 aa20.23■□□□□ 0.83
KDM2B-216ENST00000543025 PHLPP1O60346 1717 aa20.23■□□□□ 0.83
KDM2B-216ENST00000543025 CRYBG1Q9Y4K1 1723 aa20.23■□□□□ 0.83
KDM2B-216ENST00000543025 SRCIN1Q9C0H9 1055 aa20.22■□□□□ 0.83
KDM2B-216ENST00000543025 SLIT3O75094 1523 aa20.22■□□□□ 0.83
KDM2B-216ENST00000543025 PRPF40AO75400 957 aaKnown RBP20.22■□□□□ 0.83
KDM2B-216ENST00000543025 TMX3Q96JJ7 454 aa20.22■□□□□ 0.83
KDM2B-216ENST00000543025 PXDNLA1KZ92 1463 aa20.22■□□□□ 0.83
KDM2B-216ENST00000543025 MED1Q15648 1581 aaPredicted RBP20.22■□□□□ 0.83
KDM2B-216ENST00000543025 PHRF1Q9P1Y6 1649 aaKnown RBP20.22■□□□□ 0.83
KDM2B-216ENST00000543025 ANAPC15P60006 121 aa20.21■□□□□ 0.83
KDM2B-216ENST00000543025 N4BP2Q86UW6 1770 aaPredicted RBP20.21■□□□□ 0.83
KDM2B-216ENST00000543025 NFAT5O94916 1531 aa20.21■□□□□ 0.83
KDM2B-216ENST00000543025 TRIM6-TRIM34B2RNG4 842 aa20.2■□□□□ 0.82
KDM2B-216ENST00000543025 BABAM1Q9NWV8 329 aa20.2■□□□□ 0.82
KDM2B-216ENST00000543025 STAP2Q9UGK3 403 aa20.2■□□□□ 0.82
KDM2B-216ENST00000543025 COL16A1Q07092 1604 aaPredicted RBP20.2■□□□□ 0.82
KDM2B-216ENST00000543025 CACNA1FO60840 1977 aa20.2■□□□□ 0.82
KDM2B-216ENST00000543025 CHMLP26374 656 aa20.2■□□□□ 0.82
KDM2B-216ENST00000543025 NECTIN2Q92692 538 aa20.2■□□□□ 0.82
KDM2B-216ENST00000543025 RILPL2Q969X0 211 aa20.2■□□□□ 0.82
KDM2B-216ENST00000543025 LRRFIP2Q9Y608 721 aaKnown RBP20.2■□□□□ 0.82
KDM2B-216ENST00000543025 LTN1O94822 1766 aa20.2■□□□□ 0.82
KDM2B-216ENST00000543025 MAP3K5Q99683 1374 aa20.19■□□□□ 0.82
KDM2B-216ENST00000543025 GPT2Q8TD30 523 aa20.19■□□□□ 0.82
KDM2B-216ENST00000543025 HOXC9P31274 260 aa20.19■□□□□ 0.82
KDM2B-216ENST00000543025 ANO2Q9NQ90 1003 aa20.19■□□□□ 0.82
KDM2B-216ENST00000543025 ABCA3Q99758 1704 aa20.18■□□□□ 0.82
KDM2B-216ENST00000543025 AOX1Q06278 1338 aa20.18■□□□□ 0.82
KDM2B-216ENST00000543025 PLEKHG5O94827 1062 aa20.18■□□□□ 0.82
KDM2B-216ENST00000543025 CUL4AQ13619 759 aa20.18■□□□□ 0.82
KDM2B-216ENST00000543025 PRKCSHP14314 528 aaPredicted RBP20.17■□□□□ 0.82
KDM2B-216ENST00000543025 TAF7Q15545 349 aaPredicted RBP20.17■□□□□ 0.82
KDM2B-216ENST00000543025 PALD1Q9ULE6 856 aa20.17■□□□□ 0.82
KDM2B-216ENST00000543025 IL17REQ8NFR9 667 aa20.17■□□□□ 0.82
KDM2B-216ENST00000543025 INTS4Q96HW7 963 aaKnown RBP20.17■□□□□ 0.82
KDM2B-216ENST00000543025 UBTFL1P0CB47 393 aaPredicted RBP20.16■□□□□ 0.82
KDM2B-216ENST00000543025 ZSCAN30Q86W11 494 aa20.16■□□□□ 0.82
KDM2B-216ENST00000543025 IL17RAQ96F46 866 aa20.16■□□□□ 0.82
KDM2B-216ENST00000543025 USP44Q9H0E7 712 aa20.16■□□□□ 0.82
KDM2B-216ENST00000543025 EPB41L2O43491 1005 aaKnown RBP20.15■□□□□ 0.82
KDM2B-216ENST00000543025 BRD1O95696 1058 aa20.15■□□□□ 0.82
KDM2B-216ENST00000543025 PRIM1P49642 420 aaKnown RBP20.15■□□□□ 0.82
KDM2B-216ENST00000543025 RBSNQ9H1K0 784 aa20.15■□□□□ 0.82
KDM2B-216ENST00000543025 SSH3Q8TE77 659 aa20.14■□□□□ 0.82
KDM2B-216ENST00000543025 RBM27Q9P2N5 1060 aaKnown RBP20.14■□□□□ 0.82
KDM2B-216ENST00000543025 MBD3O95983 291 aa20.14■□□□□ 0.81
KDM2B-216ENST00000543025 GCP02774 474 aa20.14■□□□□ 0.81
KDM2B-216ENST00000543025 HDGFL1Q5TGJ6 251 aa20.14■□□□□ 0.81
KDM2B-216ENST00000543025 KCNH5Q8NCM2 988 aa20.14■□□□□ 0.81
KDM2B-216ENST00000543025 UNC5CLQ8IV45 518 aa20.13■□□□□ 0.81
KDM2B-216ENST00000543025 RAB11FIP3O75154 756 aa20.13■□□□□ 0.81
KDM2B-216ENST00000543025 LRSAM1Q6UWE0 723 aa20.13■□□□□ 0.81
KDM2B-216ENST00000543025 CABLES1Q8TDN4 633 aa20.13■□□□□ 0.81
KDM2B-216ENST00000543025 TMEM63CQ9P1W3 806 aa20.13■□□□□ 0.81
KDM2B-216ENST00000543025 COL22A1Q8NFW1 1626 aaPredicted RBP20.13■□□□□ 0.81
KDM2B-216ENST00000543025 MSNP26038 577 aaKnown RBP20.12■□□□□ 0.81
KDM2B-216ENST00000543025 HS1BP3Q53T59 392 aa20.12■□□□□ 0.81
KDM2B-216ENST00000543025 FOXD4L5Q5VV16 416 aaPredicted RBP20.12■□□□□ 0.81
KDM2B-216ENST00000543025 FOXD4L4Q8WXT5 416 aaPredicted RBP20.12■□□□□ 0.81
KDM2B-216ENST00000543025 LRRC59Q96AG4 307 aaKnown RBP20.12■□□□□ 0.81
KDM2B-216ENST00000543025 CHAMP1Q96JM3 812 aa20.12■□□□□ 0.81
KDM2B-216ENST00000543025 IL1RAPL2Q9NP60 686 aa20.12■□□□□ 0.81
KDM2B-216ENST00000543025 PDLIM2Q96JY6 352 aa20.11■□□□□ 0.81
KDM2B-216ENST00000543025 PHAXQ9H814 394 aaKnown RBP20.11■□□□□ 0.81
KDM2B-216ENST00000543025 LTV1Q96GA3 475 aaPredicted RBP20.1■□□□□ 0.81
KDM2B-216ENST00000543025 SYCE3A1L190 88 aa20.1■□□□□ 0.81
KDM2B-216ENST00000543025 NOL8Q76FK4 1167 aaKnown RBP20.1■□□□□ 0.81
KDM2B-216ENST00000543025 NSFL1CQ9UNZ2 370 aaKnown RBP20.1■□□□□ 0.81
KDM2B-216ENST00000543025 HSPA4P34932 840 aa20.09■□□□□ 0.81
KDM2B-216ENST00000543025 POLA2Q14181 598 aa20.09■□□□□ 0.81
KDM2B-216ENST00000543025 PPP1R42Q7Z4L9 355 aa20.09■□□□□ 0.81
KDM2B-216ENST00000543025 SURF6O75683 361 aaKnown RBP20.09■□□□□ 0.81
KDM2B-216ENST00000543025 NUTM1Q86Y26 1132 aa20.09■□□□□ 0.81
KDM2B-216ENST00000543025 UPF3BQ9BZI7 483 aaKnown RBP20.09■□□□□ 0.81
KDM2B-216ENST00000543025 CEMIPQ8WUJ3 1361 aa20.08■□□□□ 0.8
KDM2B-216ENST00000543025 RHPN1Q8TCX5 695 aa20.08■□□□□ 0.8
KDM2B-216ENST00000543025 IL25Q9H293 177 aa20.08■□□□□ 0.8
KDM2B-216ENST00000543025 KIF1BPQ96EK5 621 aa20.07■□□□□ 0.8
KDM2B-216ENST00000543025 ARHGEF25Q86VW2 580 aa20.07■□□□□ 0.8
KDM2B-216ENST00000543025 PI4K2BQ8TCG2 481 aa20.07■□□□□ 0.8
KDM2B-216ENST00000543025 ZBTB7CA1YPR0 619 aa20.06■□□□□ 0.8
KDM2B-216ENST00000543025 RGPD5Q99666 1765 aa20.06■□□□□ 0.8
KDM2B-216ENST00000543025 SRGAP3O43295 1099 aa20.06■□□□□ 0.8
KDM2B-216ENST00000543025 ZC3H6P61129 1189 aaKnown RBP20.06■□□□□ 0.8
KDM2B-216ENST00000543025 USHBP1Q8N6Y0 703 aa20.06■□□□□ 0.8
KDM2B-216ENST00000543025 UBE2Q2Q8WVN8 375 aa20.06■□□□□ 0.8
KDM2B-216ENST00000543025 CHMP4AQ9BY43 222 aa20.06■□□□□ 0.8
KDM2B-216ENST00000543025 COL18A1P39060 1754 aa20.05■□□□□ 0.8
KDM2B-216ENST00000543025 RAD50Q92878 1312 aa20.05■□□□□ 0.8
KDM2B-216ENST00000543025 HOXB7P09629 217 aa20.05■□□□□ 0.8
KDM2B-216ENST00000543025 NOL7Q9UMY1 257 aaKnown RBP20.05■□□□□ 0.8
KDM2B-216ENST00000543025 EIF2S2P20042 333 aaKnown RBP20.05■□□□□ 0.8
KDM2B-216ENST00000543025 SYAP1Q96A49 352 aaPredicted RBP20.05■□□□□ 0.8
KDM2B-216ENST00000543025 WDR33Q9C0J8 1336 aaKnown RBP20.04■□□□□ 0.8
KDM2B-216ENST00000543025 SGSM2O43147 1006 aa20.04■□□□□ 0.8
KDM2B-216ENST00000543025 TPM2P07951 284 aa20.04■□□□□ 0.8
KDM2B-216ENST00000543025 CNTROBQ8N137 903 aa20.04■□□□□ 0.8
KDM2B-216ENST00000543025 MAP4K4O95819 1239 aaPredicted RBP20.04■□□□□ 0.8
KDM2B-216ENST00000543025 EIF4A1P60842 406 aaKnown RBP20.04■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms