RNA–Protein interactions for RNA: ENST00000542685.5

XRCC4-206, Transcript of X-ray repair cross complementing 4, humanhuman

TSL 1 (best)

Gene XRCC4, Length 1,243 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC4-206ENST00000542685 MARSP56192 900 aaKnown RBP10.19□□□□□ -0.78
XRCC4-206ENST00000542685 TNS4Q8IZW8 715 aa10.19□□□□□ -0.78
XRCC4-206ENST00000542685 OGFOD1Q8N543 542 aa10.19□□□□□ -0.78
XRCC4-206ENST00000542685 CALR3Q96L12 384 aaKnown RBP10.19□□□□□ -0.78
XRCC4-206ENST00000542685 ENAMQ9NRM1 1142 aa10.19□□□□□ -0.78
XRCC4-206ENST00000542685 BNIP3LO60238 219 aa10.18□□□□□ -0.78
XRCC4-206ENST00000542685 BCRP11274 1271 aa10.18□□□□□ -0.78
XRCC4-206ENST00000542685 TATP17735 454 aaPredicted RBP10.18□□□□□ -0.78
XRCC4-206ENST00000542685 ZCCHC2Q9C0B9 1178 aaKnown RBP10.18□□□□□ -0.78
XRCC4-206ENST00000542685 ATXN7L1Q9ULK2 861 aaPredicted RBP10.18□□□□□ -0.78
XRCC4-206ENST00000542685 MAP2K3P46734 347 aa10.17□□□□□ -0.78
XRCC4-206ENST00000542685 KCNMA1Q12791 1236 aa10.17□□□□□ -0.78
XRCC4-206ENST00000542685 SLC9A9Q8IVB4 645 aa10.17□□□□□ -0.78
XRCC4-206ENST00000542685 ZNF594Q96JF6 807 aaPredicted RBP10.17□□□□□ -0.78
XRCC4-206ENST00000542685 A0A1W2PNR3 127 aa10.16□□□□□ -0.78
XRCC4-206ENST00000542685 PALM3A6NDB9 673 aaPredicted RBP10.16□□□□□ -0.78
XRCC4-206ENST00000542685 RNF225M0QZC1 329 aaPredicted RBP10.16□□□□□ -0.78
XRCC4-206ENST00000542685 EPHA4P54764 986 aa10.16□□□□□ -0.78
XRCC4-206ENST00000542685 FOXK2Q01167 660 aa10.16□□□□□ -0.78
XRCC4-206ENST00000542685 FIGNL1Q6PIW4 674 aa10.16□□□□□ -0.78
XRCC4-206ENST00000542685 NLRP8Q86W28 1048 aa10.16□□□□□ -0.78
XRCC4-206ENST00000542685 LARGE2Q8N3Y3 721 aa10.16□□□□□ -0.78
XRCC4-206ENST00000542685 ZDHHC1Q8WTX9 485 aa10.16□□□□□ -0.78
XRCC4-206ENST00000542685 L3MBTL2Q969R5 705 aa10.16□□□□□ -0.78
XRCC4-206ENST00000542685 OXCT2Q9BYC2 517 aaPredicted RBP10.16□□□□□ -0.78
XRCC4-206ENST00000542685 NDFIP2Q9NV92 336 aa10.16□□□□□ -0.78
XRCC4-206ENST00000542685 ZDHHC3Q9NYG2 299 aa10.16□□□□□ -0.78
XRCC4-206ENST00000542685 ZNF232Q9UNY5 417 aa10.16□□□□□ -0.78
XRCC4-206ENST00000542685 MAFBQ9Y5Q3 323 aaPredicted RBP10.16□□□□□ -0.78
XRCC4-206ENST00000542685 BMP4P12644 408 aa10.15□□□□□ -0.78
XRCC4-206ENST00000542685 FGFR3P22607 806 aa10.15□□□□□ -0.78
XRCC4-206ENST00000542685 TXLNAP40222 546 aa10.15□□□□□ -0.78
XRCC4-206ENST00000542685 BICDL1Q6ZP65 573 aa10.15□□□□□ -0.78
XRCC4-206ENST00000542685 NEDD1Q8NHV4 660 aa10.15□□□□□ -0.78
XRCC4-206ENST00000542685 KLRG1Q96E93 195 aa10.15□□□□□ -0.78
XRCC4-206ENST00000542685 PCDHGC4Q9Y5F7 938 aa10.15□□□□□ -0.78
XRCC4-206ENST00000542685 ATXN7O15265 892 aaPredicted RBP10.14□□□□□ -0.79
XRCC4-206ENST00000542685 RASA1P20936 1047 aa10.14□□□□□ -0.79
XRCC4-206ENST00000542685 NOS2P35228 1153 aa10.14□□□□□ -0.79
XRCC4-206ENST00000542685 GSK3AP49840 483 aa10.14□□□□□ -0.79
XRCC4-206ENST00000542685 CTBSQ01459 385 aa10.14□□□□□ -0.79
XRCC4-206ENST00000542685 ZIC5Q96T25 663 aa10.14□□□□□ -0.79
XRCC4-206ENST00000542685 RBM19Q9Y4C8 960 aaKnown RBP10.14□□□□□ -0.79
XRCC4-206ENST00000542685 GJA3Q9Y6H8 435 aa10.14□□□□□ -0.79
XRCC4-206ENST00000542685 DCDC2BA2VCK2 349 aa10.13□□□□□ -0.79
XRCC4-206ENST00000542685 SFI1A8K8P3 1242 aa10.13□□□□□ -0.79
XRCC4-206ENST00000542685 IRS1P35568 1242 aa10.13□□□□□ -0.79
XRCC4-206ENST00000542685 RASSF7Q02833 373 aa10.13□□□□□ -0.79
XRCC4-206ENST00000542685 TEAD4Q15561 434 aa10.13□□□□□ -0.79
XRCC4-206ENST00000542685 PPP1R12CQ9BZL4 782 aa10.13□□□□□ -0.79
XRCC4-206ENST00000542685 C2CD2LO14523 706 aa10.12□□□□□ -0.79
XRCC4-206ENST00000542685 OIP5O43482 229 aa10.12□□□□□ -0.79
XRCC4-206ENST00000542685 SIX5Q8N196 739 aa10.12□□□□□ -0.79
XRCC4-206ENST00000542685 TSEN2Q8NCE0 465 aaKnown RBP10.12□□□□□ -0.79
XRCC4-206ENST00000542685 SCARF2Q96GP6 870 aaPredicted RBP10.12□□□□□ -0.79
XRCC4-206ENST00000542685 TSPAN10Q9H1Z9 355 aaPredicted RBP10.12□□□□□ -0.79
XRCC4-206ENST00000542685 SERTM1A2A2V5 107 aa10.11□□□□□ -0.79
XRCC4-206ENST00000542685 KHNYNO15037 678 aaKnown RBP10.11□□□□□ -0.79
XRCC4-206ENST00000542685 GDF11O95390 407 aa10.11□□□□□ -0.79
XRCC4-206ENST00000542685 SH3PXD2AQ5TCZ1 1133 aa10.11□□□□□ -0.79
XRCC4-206ENST00000542685 ZNF777Q9ULD5 760 aaPredicted RBP10.11□□□□□ -0.79
XRCC4-206ENST00000542685 MAPTP10636 758 aaKnown RBP10.1□□□□□ -0.79
XRCC4-206ENST00000542685 TMEM151AQ8N4L1 468 aa10.1□□□□□ -0.79
XRCC4-206ENST00000542685 GALNT6Q8NCL4 622 aa10.1□□□□□ -0.79
XRCC4-206ENST00000542685 CD33P20138 364 aa10.09□□□□□ -0.79
XRCC4-206ENST00000542685 LMOD1P29536 600 aaPredicted RBP10.09□□□□□ -0.79
XRCC4-206ENST00000542685 TNP2Q05952 138 aa10.09□□□□□ -0.79
XRCC4-206ENST00000542685 LARP1Q6PKG0 1096 aaKnown RBP10.09□□□□□ -0.79
XRCC4-206ENST00000542685 C1orf229Q6ZS94 237 aaPredicted RBP10.09□□□□□ -0.79
XRCC4-206ENST00000542685 LRRC4BQ9NT99 713 aa10.09□□□□□ -0.79
XRCC4-206ENST00000542685 GDF2Q9UK05 429 aaPredicted RBP10.09□□□□□ -0.79
XRCC4-206ENST00000542685 CNTNAP5Q8WYK1 1306 aa10.08□□□□□ -0.8
XRCC4-206ENST00000542685 M0R2N6 131 aa10.08□□□□□ -0.8
XRCC4-206ENST00000542685 DKK1O94907 266 aa10.08□□□□□ -0.8
XRCC4-206ENST00000542685 PSMA6P60900 246 aaKnown RBP10.08□□□□□ -0.8
XRCC4-206ENST00000542685 LRRC69Q6ZNQ3 347 aa10.08□□□□□ -0.8
XRCC4-206ENST00000542685 GOLGA6L1Q8N7Z2 621 aa10.08□□□□□ -0.8
XRCC4-206ENST00000542685 GGA1Q9UJY5 639 aa10.08□□□□□ -0.8
XRCC4-206ENST00000542685 HCN2Q9UL51 889 aa10.08□□□□□ -0.8
XRCC4-206ENST00000542685 CHMP3Q9Y3E7 222 aa10.08□□□□□ -0.8
XRCC4-206ENST00000542685 SHISA8B8ZZ34 492 aa10.07□□□□□ -0.8
XRCC4-206ENST00000542685 EML1O00423 815 aa10.07□□□□□ -0.8
XRCC4-206ENST00000542685 SEC13P55735 322 aa10.07□□□□□ -0.8
XRCC4-206ENST00000542685 PODNQ7Z5L7 613 aa10.07□□□□□ -0.8
XRCC4-206ENST00000542685 KCTD17Q8N5Z5 321 aa10.07□□□□□ -0.8
XRCC4-206ENST00000542685 NEUROD4Q9HD90 331 aa10.07□□□□□ -0.8
XRCC4-206ENST00000542685 HCN4Q9Y3Q4 1203 aa10.07□□□□□ -0.8
XRCC4-206ENST00000542685 DNMT3AQ9Y6K1 912 aaPredicted RBP10.07□□□□□ -0.8
XRCC4-206ENST00000542685 PPP1R12BO60237 982 aaPredicted RBP10.06□□□□□ -0.8
XRCC4-206ENST00000542685 CRTC2Q53ET0 693 aaPredicted RBP10.06□□□□□ -0.8
XRCC4-206ENST00000542685 KANK4Q5T7N3 995 aaPredicted RBP10.06□□□□□ -0.8
XRCC4-206ENST00000542685 RHPN1Q8TCX5 695 aa10.06□□□□□ -0.8
XRCC4-206ENST00000542685 EDARADDQ8WWZ3 215 aa10.06□□□□□ -0.8
XRCC4-206ENST00000542685 FAM157BP0CG42 384 aa10.05□□□□□ -0.8
XRCC4-206ENST00000542685 KANK3Q6NY19 840 aa10.05□□□□□ -0.8
XRCC4-206ENST00000542685 BEND7Q8N7W2 519 aaPredicted RBP10.05□□□□□ -0.8
XRCC4-206ENST00000542685 VRTNQ9H8Y1 702 aa10.05□□□□□ -0.8
XRCC4-206ENST00000542685 NEURL1BA8MQ27 555 aa10.04□□□□□ -0.8
XRCC4-206ENST00000542685 LGR5O75473 907 aa10.04□□□□□ -0.8
XRCC4-206ENST00000542685 DPYDQ12882 1025 aa10.04□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 63.5 ms