RNA–Protein interactions for RNA: ENST00000542680.1

CACNA1C-IT3-201, CACNA1C intronic transcript 3, humanhuman

TSL 3 BASIC

Gene CACNA1C-IT3, Length 622 nt, Biotype sense intronic.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1C-IT3-201ENST00000542680 TAF1LQ8IZX4 1826 aa16.01■□□□□ 0.15
CACNA1C-IT3-201ENST00000542680 CEMIPQ8WUJ3 1361 aa16■□□□□ 0.15
CACNA1C-IT3-201ENST00000542680 N4BP2Q86UW6 1770 aaPredicted RBP16■□□□□ 0.15
CACNA1C-IT3-201ENST00000542680 SCN11AQ9UI33 1791 aa16■□□□□ 0.15
CACNA1C-IT3-201ENST00000542680 SMC1BQ8NDV3 1235 aa16■□□□□ 0.15
CACNA1C-IT3-201ENST00000542680 IFT57Q9NWB7 429 aa16■□□□□ 0.15
CACNA1C-IT3-201ENST00000542680 BRCA1P38398 1863 aaKnown RBP15.99■□□□□ 0.15
CACNA1C-IT3-201ENST00000542680 MLLT1Q03111 559 aaPredicted RBP15.99■□□□□ 0.15
CACNA1C-IT3-201ENST00000542680 IFNL2Q8IZJ0 200 aa15.99■□□□□ 0.15
CACNA1C-IT3-201ENST00000542680 BABAM1Q9NWV8 329 aa15.99■□□□□ 0.15
CACNA1C-IT3-201ENST00000542680 TOGARAM1Q9Y4F4 1720 aa15.99■□□□□ 0.15
CACNA1C-IT3-201ENST00000542680 MRC1P22897 1456 aa15.98■□□□□ 0.15
CACNA1C-IT3-201ENST00000542680 GNAI1P63096 354 aa15.98■□□□□ 0.15
CACNA1C-IT3-201ENST00000542680 DUSP27Q5VZP5 1158 aa15.98■□□□□ 0.15
CACNA1C-IT3-201ENST00000542680 ZCRB1Q8TBF4 217 aaKnown RBP15.98■□□□□ 0.15
CACNA1C-IT3-201ENST00000542680 FOXN1O15353 648 aa15.97■□□□□ 0.15
CACNA1C-IT3-201ENST00000542680 PHKG2P15735 406 aa15.97■□□□□ 0.15
CACNA1C-IT3-201ENST00000542680 CDCA7LQ96GN5 454 aa15.97■□□□□ 0.15
CACNA1C-IT3-201ENST00000542680 CFAP44Q96MT7 982 aa15.97■□□□□ 0.15
CACNA1C-IT3-201ENST00000542680 CCNL1Q9UK58 526 aaPredicted RBP15.97■□□□□ 0.15
CACNA1C-IT3-201ENST00000542680 SIPA1L3O60292 1781 aaPredicted RBP15.97■□□□□ 0.15
CACNA1C-IT3-201ENST00000542680 ZNF853P0CG23 659 aa15.96■□□□□ 0.15
CACNA1C-IT3-201ENST00000542680 RGS19P49795 217 aa15.96■□□□□ 0.15
CACNA1C-IT3-201ENST00000542680 ARFGEF1Q9Y6D6 1849 aa15.96■□□□□ 0.14
CACNA1C-IT3-201ENST00000542680 KDM2BQ8NHM5 1336 aa15.95■□□□□ 0.14
CACNA1C-IT3-201ENST00000542680 CT47B1P0C2W7 299 aaPredicted RBP15.95■□□□□ 0.14
CACNA1C-IT3-201ENST00000542680 NKX1-1Q15270 411 aaPredicted RBP15.95■□□□□ 0.14
CACNA1C-IT3-201ENST00000542680 ABHD8Q96I13 439 aa15.95■□□□□ 0.14
CACNA1C-IT3-201ENST00000542680 DCAF5Q96JK2 942 aa15.95■□□□□ 0.14
CACNA1C-IT3-201ENST00000542680 UBR3Q6ZT12 1888 aa15.95■□□□□ 0.14
CACNA1C-IT3-201ENST00000542680 CYP27B1O15528 508 aa15.94■□□□□ 0.14
CACNA1C-IT3-201ENST00000542680 MCM10Q7L590 875 aa15.94■□□□□ 0.14
CACNA1C-IT3-201ENST00000542680 IL17REQ8NFR9 667 aa15.94■□□□□ 0.14
CACNA1C-IT3-201ENST00000542680 RRAGCQ9HB90 399 aa15.94■□□□□ 0.14
CACNA1C-IT3-201ENST00000542680 SPINK5Q9NQ38 1064 aaPredicted RBP15.94■□□□□ 0.14
CACNA1C-IT3-201ENST00000542680 KDM6AO15550 1401 aaPredicted RBP15.94■□□□□ 0.14
CACNA1C-IT3-201ENST00000542680 FANCIQ9NVI1 1328 aa15.94■□□□□ 0.14
CACNA1C-IT3-201ENST00000542680 KDM3BQ7LBC6 1761 aa15.93■□□□□ 0.14
CACNA1C-IT3-201ENST00000542680 RNMTO43148 476 aaKnown RBP15.93■□□□□ 0.14
CACNA1C-IT3-201ENST00000542680 C9orf131Q5VYM1 1079 aa15.93■□□□□ 0.14
CACNA1C-IT3-201ENST00000542680 FLAD1Q8NFF5 587 aa15.93■□□□□ 0.14
CACNA1C-IT3-201ENST00000542680 SBF1O95248 1867 aa15.93■□□□□ 0.14
CACNA1C-IT3-201ENST00000542680 CHL1O00533 1208 aa15.92■□□□□ 0.14
CACNA1C-IT3-201ENST00000542680 DCTN1Q14203 1278 aa15.92■□□□□ 0.14
CACNA1C-IT3-201ENST00000542680 ARHGAP27Q6ZUM4 889 aa15.92■□□□□ 0.14
CACNA1C-IT3-201ENST00000542680 THUMPD2Q9BTF0 503 aaKnown RBP15.92■□□□□ 0.14
CACNA1C-IT3-201ENST00000542680 PRIM1P49642 420 aaKnown RBP15.91■□□□□ 0.14
CACNA1C-IT3-201ENST00000542680 TEFQ10587 303 aa15.91■□□□□ 0.14
CACNA1C-IT3-201ENST00000542680 TAF7Q15545 349 aaPredicted RBP15.91■□□□□ 0.14
CACNA1C-IT3-201ENST00000542680 ZNF428Q96B54 188 aa15.91■□□□□ 0.14
CACNA1C-IT3-201ENST00000542680 SOS1Q07889 1333 aaPredicted RBP15.91■□□□□ 0.14
CACNA1C-IT3-201ENST00000542680 MPRIPQ6WCQ1 1025 aa15.9■□□□□ 0.14
CACNA1C-IT3-201ENST00000542680 BCS1LQ9Y276 419 aa15.9■□□□□ 0.14
CACNA1C-IT3-201ENST00000542680 C4BP0C0L5 1744 aa15.9■□□□□ 0.14
CACNA1C-IT3-201ENST00000542680 ERVV-2B6SEH9 535 aa15.89■□□□□ 0.13
CACNA1C-IT3-201ENST00000542680 CTCFP49711 727 aaPredicted RBP15.89■□□□□ 0.13
CACNA1C-IT3-201ENST00000542680 SYTL4Q96C24 671 aaPredicted RBP15.89■□□□□ 0.13
CACNA1C-IT3-201ENST00000542680 MBIPQ9NS73 344 aa15.89■□□□□ 0.13
CACNA1C-IT3-201ENST00000542680 SLC52A2Q9HAB3 445 aa15.88■□□□□ 0.13
CACNA1C-IT3-201ENST00000542680 LGR6Q9HBX8 967 aa15.88■□□□□ 0.13
CACNA1C-IT3-201ENST00000542680 TSPYL4Q9UJ04 414 aa15.88■□□□□ 0.13
CACNA1C-IT3-201ENST00000542680 AMIGO3Q86WK7 504 aa15.87■□□□□ 0.13
CACNA1C-IT3-201ENST00000542680 TSR2Q969E8 191 aaKnown RBP15.87■□□□□ 0.13
CACNA1C-IT3-201ENST00000542680 DDX54Q8TDD1 881 aaKnown RBP15.86■□□□□ 0.13
CACNA1C-IT3-201ENST00000542680 RCAN3Q9UKA8 241 aa15.86■□□□□ 0.13
CACNA1C-IT3-201ENST00000542680 LAS1LQ9Y4W2 734 aaKnown RBP15.86■□□□□ 0.13
CACNA1C-IT3-201ENST00000542680 ITGB4P16144 1822 aa15.85■□□□□ 0.13
CACNA1C-IT3-201ENST00000542680 CHMP4AQ9BY43 222 aa15.85■□□□□ 0.13
CACNA1C-IT3-201ENST00000542680 BTBD11A6QL63 1104 aa15.84■□□□□ 0.13
CACNA1C-IT3-201ENST00000542680 HOXB7P09629 217 aa15.84■□□□□ 0.13
CACNA1C-IT3-201ENST00000542680 CABP4P57796 275 aa15.84■□□□□ 0.13
CACNA1C-IT3-201ENST00000542680 EXOSC9Q06265 439 aaKnown RBP15.84■□□□□ 0.13
CACNA1C-IT3-201ENST00000542680 SMIM5Q71RC9 77 aa15.84■□□□□ 0.13
CACNA1C-IT3-201ENST00000542680 MKRN1Q9UHC7 482 aaKnown RBP15.84■□□□□ 0.13
CACNA1C-IT3-201ENST00000542680 UBR2Q8IWV8 1755 aa15.84■□□□□ 0.13
CACNA1C-IT3-201ENST00000542680 A0A0G2JLW4 131 aa15.83■□□□□ 0.12
CACNA1C-IT3-201ENST00000542680 LBX1P52954 281 aa15.83■□□□□ 0.12
CACNA1C-IT3-201ENST00000542680 TGFB2P61812 414 aa15.83■□□□□ 0.12
CACNA1C-IT3-201ENST00000542680 RNF123Q5XPI4 1314 aa15.83■□□□□ 0.12
CACNA1C-IT3-201ENST00000542680 CACNA1FO60840 1977 aa15.82■□□□□ 0.12
CACNA1C-IT3-201ENST00000542680 ALDH1L2Q3SY69 923 aa15.82■□□□□ 0.12
CACNA1C-IT3-201ENST00000542680 AIDAQ96BJ3 306 aa15.82■□□□□ 0.12
CACNA1C-IT3-201ENST00000542680 CREBZFQ9NS37 354 aa15.82■□□□□ 0.12
CACNA1C-IT3-201ENST00000542680 RNF181Q9P0P0 153 aa15.82■□□□□ 0.12
CACNA1C-IT3-201ENST00000542680 CCDC85CA6NKD9 419 aa15.81■□□□□ 0.12
CACNA1C-IT3-201ENST00000542680 TWISTNBQ3B726 338 aaPredicted RBP15.81■□□□□ 0.12
CACNA1C-IT3-201ENST00000542680 HEG1Q9ULI3 1381 aa15.81■□□□□ 0.12
CACNA1C-IT3-201ENST00000542680 CNTNAP1P78357 1384 aa15.8■□□□□ 0.12
CACNA1C-IT3-201ENST00000542680 ZNF790Q6PG37 636 aa15.8■□□□□ 0.12
CACNA1C-IT3-201ENST00000542680 NFATC2IPQ8NCF5 419 aa15.8■□□□□ 0.12
CACNA1C-IT3-201ENST00000542680 TMOD3Q9NYL9 352 aa15.8■□□□□ 0.12
CACNA1C-IT3-201ENST00000542680 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP15.79■□□□□ 0.12
CACNA1C-IT3-201ENST00000542680 VAMP4O75379 141 aa15.79■□□□□ 0.12
CACNA1C-IT3-201ENST00000542680 RARSP54136 660 aaKnown RBP15.79■□□□□ 0.12
CACNA1C-IT3-201ENST00000542680 BRPF1P55201 1214 aaPredicted RBP15.79■□□□□ 0.12
CACNA1C-IT3-201ENST00000542680 EIF4A1P60842 406 aaKnown RBP15.79■□□□□ 0.12
CACNA1C-IT3-201ENST00000542680 TTC5Q8N0Z6 440 aa15.79■□□□□ 0.12
CACNA1C-IT3-201ENST00000542680 GOLGA6L2Q8N9W4 650 aaPredicted RBP15.79■□□□□ 0.12
CACNA1C-IT3-201ENST00000542680 LAMB4A4D0S4 1761 aa15.79■□□□□ 0.12
CACNA1C-IT3-201ENST00000542680 PHF14O94880 888 aa15.78■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms