RNA–Protein interactions for RNA: ENST00000542570.5

TOP3A-208, Transcript of DNA topoisomerase III alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TOP3A, Length 4,116 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-208ENST00000542570 KIDINS220Q9ULH0 1771 aa12.24□□□□□ -0.45
TOP3A-208ENST00000542570 CPLX1O14810 134 aa12.24□□□□□ -0.45
TOP3A-208ENST00000542570 ZPR1O75312 459 aa12.24□□□□□ -0.45
TOP3A-208ENST00000542570 SDSP20132 328 aa12.24□□□□□ -0.45
TOP3A-208ENST00000542570 ANKRD44Q8N8A2 993 aa12.24□□□□□ -0.45
TOP3A-208ENST00000542570 ARAP3Q8WWN8 1544 aa12.24□□□□□ -0.45
TOP3A-208ENST00000542570 PIK3R4Q99570 1358 aa12.24□□□□□ -0.45
TOP3A-208ENST00000542570 CHMP5Q9NZZ3 219 aa12.24□□□□□ -0.45
TOP3A-208ENST00000542570 TRDNQ13061 729 aa12.23□□□□□ -0.45
TOP3A-208ENST00000542570 HSP90AB3PQ58FF7 597 aa12.23□□□□□ -0.45
TOP3A-208ENST00000542570 PRPF40BQ6NWY9 871 aaKnown RBP12.23□□□□□ -0.45
TOP3A-208ENST00000542570 BRINP3Q76B58 766 aa12.23□□□□□ -0.45
TOP3A-208ENST00000542570 ERC1Q8IUD2 1116 aa12.23□□□□□ -0.45
TOP3A-208ENST00000542570 SMC3Q9UQE7 1217 aa12.23□□□□□ -0.45
TOP3A-208ENST00000542570 JAG2Q9Y219 1238 aa12.23□□□□□ -0.45
TOP3A-208ENST00000542570 EIF4A1P60842 406 aaKnown RBP12.23□□□□□ -0.45
TOP3A-208ENST00000542570 RNF20Q5VTR2 975 aa12.23□□□□□ -0.45
TOP3A-208ENST00000542570 ARHGAP45Q92619 1136 aa12.23□□□□□ -0.45
TOP3A-208ENST00000542570 CWC25Q9NXE8 425 aaPredicted RBP12.23□□□□□ -0.45
TOP3A-208ENST00000542570 DIP2CQ9Y2E4 1556 aa12.23□□□□□ -0.45
TOP3A-208ENST00000542570 GOLIM4O00461 696 aa12.23□□□□□ -0.45
TOP3A-208ENST00000542570 NUCB1Q02818 461 aa12.23□□□□□ -0.45
TOP3A-208ENST00000542570 ZNF594Q96JF6 807 aaPredicted RBP12.23□□□□□ -0.45
TOP3A-208ENST00000542570 JAKMIP1Q96N16 626 aaKnown RBP12.23□□□□□ -0.45
TOP3A-208ENST00000542570 PPRC1Q5VV67 1664 aaKnown RBP12.23□□□□□ -0.45
TOP3A-208ENST00000542570 SF3A1Q15459 793 aaKnown RBP12.22□□□□□ -0.45
TOP3A-208ENST00000542570 RALYLQ86SE5 291 aaKnown RBP12.22□□□□□ -0.45
TOP3A-208ENST00000542570 UNC13BO14795 1591 aa12.22□□□□□ -0.45
TOP3A-208ENST00000542570 RAB11FIP4Q86YS3 637 aa12.22□□□□□ -0.45
TOP3A-208ENST00000542570 CREBRFQ8IUR6 639 aa12.22□□□□□ -0.45
TOP3A-208ENST00000542570 PIBF1Q8WXW3 757 aa12.22□□□□□ -0.45
TOP3A-208ENST00000542570 CROCC2H7BZ55 1655 aa12.22□□□□□ -0.45
TOP3A-208ENST00000542570 TIMM10P62072 90 aa12.22□□□□□ -0.45
TOP3A-208ENST00000542570 DNTTIP2Q5QJE6 756 aaKnown RBP12.22□□□□□ -0.45
TOP3A-208ENST00000542570 ASAP1Q9ULH1 1129 aa12.22□□□□□ -0.45
TOP3A-208ENST00000542570 ABCA6Q8N139 1617 aa12.22□□□□□ -0.45
TOP3A-208ENST00000542570 MAP3K4Q9Y6R4 1608 aa12.22□□□□□ -0.45
TOP3A-208ENST00000542570 ZNF521Q96K83 1311 aa12.22□□□□□ -0.45
TOP3A-208ENST00000542570 DHX16O60231 1041 aaKnown RBP12.22□□□□□ -0.45
TOP3A-208ENST00000542570 C8orf34Q49A92 452 aa12.22□□□□□ -0.45
TOP3A-208ENST00000542570 BICC1Q9H694 974 aaKnown RBP12.22□□□□□ -0.45
TOP3A-208ENST00000542570 IFIT1P09914 478 aaKnown RBP12.21□□□□□ -0.45
TOP3A-208ENST00000542570 HCLS1P14317 486 aaPredicted RBP12.21□□□□□ -0.45
TOP3A-208ENST00000542570 SLC52A2Q9HAB3 445 aa12.21□□□□□ -0.45
TOP3A-208ENST00000542570 KDM5AP29375 1690 aaKnown RBP12.21□□□□□ -0.45
TOP3A-208ENST00000542570 BLMP54132 1417 aaPredicted RBP12.21□□□□□ -0.45
TOP3A-208ENST00000542570 CCDC82Q8N4S0 544 aa12.21□□□□□ -0.45
TOP3A-208ENST00000542570 LRP2BPQ9P2M1 347 aa12.21□□□□□ -0.45
TOP3A-208ENST00000542570 PDE1AP54750 535 aa12.21□□□□□ -0.46
TOP3A-208ENST00000542570 HAND2P61296 217 aa12.21□□□□□ -0.46
TOP3A-208ENST00000542570 HDAC1Q13547 482 aaPredicted RBP12.21□□□□□ -0.46
TOP3A-208ENST00000542570 TTLL7Q6ZT98 887 aa12.21□□□□□ -0.46
TOP3A-208ENST00000542570 RAI14Q9P0K7 980 aa12.21□□□□□ -0.46
TOP3A-208ENST00000542570 ALKQ9UM73 1620 aa12.21□□□□□ -0.46
TOP3A-208ENST00000542570 DDX21Q9NR30 783 aaKnown RBP eCLIP12.2□□□□□ -0.46
TOP3A-208ENST00000542570 NIP7Q9Y221 180 aaKnown RBP eCLIP12.2□□□□□ -0.46
TOP3A-208ENST00000542570 TRPM1Q7Z4N2 1603 aa12.2□□□□□ -0.46
TOP3A-208ENST00000542570 FERMT3Q86UX7 667 aa12.2□□□□□ -0.46
TOP3A-208ENST00000542570 LINS1Q8NG48 757 aa12.2□□□□□ -0.46
TOP3A-208ENST00000542570 DDX11Q96FC9 970 aa12.2□□□□□ -0.46
TOP3A-208ENST00000542570 TBC1D2Q9BYX2 928 aa12.2□□□□□ -0.46
TOP3A-208ENST00000542570 GLRX3O76003 335 aaKnown RBP12.2□□□□□ -0.46
TOP3A-208ENST00000542570 ATP8B2P98198 1209 aa12.2□□□□□ -0.46
TOP3A-208ENST00000542570 DZIP3Q86Y13 1208 aaKnown RBP12.2□□□□□ -0.46
TOP3A-208ENST00000542570 MADDQ8WXG6 1647 aa12.2□□□□□ -0.46
TOP3A-208ENST00000542570 HTATSF1O43719 755 aaKnown RBP12.19□□□□□ -0.46
TOP3A-208ENST00000542570 GIGYF1O75420 1035 aaPredicted RBP12.19□□□□□ -0.46
TOP3A-208ENST00000542570 PHKG2P15735 406 aa12.19□□□□□ -0.46
TOP3A-208ENST00000542570 CASTP20810 708 aaKnown RBP12.19□□□□□ -0.46
TOP3A-208ENST00000542570 SPHKAPQ2M3C7 1700 aa12.19□□□□□ -0.46
TOP3A-208ENST00000542570 IGHMBP2P38935 993 aaKnown RBP12.19□□□□□ -0.46
TOP3A-208ENST00000542570 DRC7Q8IY82 874 aa12.19□□□□□ -0.46
TOP3A-208ENST00000542570 LRRC2Q9BYS8 371 aa12.19□□□□□ -0.46
TOP3A-208ENST00000542570 BCL11BQ9C0K0 894 aaPredicted RBP12.19□□□□□ -0.46
TOP3A-208ENST00000542570 ECHDC1Q9NTX5 307 aa12.19□□□□□ -0.46
TOP3A-208ENST00000542570 MPNDQ8N594 471 aa12.18□□□□□ -0.46
TOP3A-208ENST00000542570 ZMYM4Q5VZL5 1548 aa12.18□□□□□ -0.46
TOP3A-208ENST00000542570 PRPF40AO75400 957 aaKnown RBP12.18□□□□□ -0.46
TOP3A-208ENST00000542570 EDC3Q96F86 508 aaKnown RBP12.18□□□□□ -0.46
TOP3A-208ENST00000542570 DCTPP1Q9H773 170 aa12.18□□□□□ -0.46
TOP3A-208ENST00000542570 GOLGA6L3A6NEY3 463 aa12.18□□□□□ -0.46
TOP3A-208ENST00000542570 FIBPO43427 364 aa12.18□□□□□ -0.46
TOP3A-208ENST00000542570 TTC22Q5TAA0 569 aa12.18□□□□□ -0.46
TOP3A-208ENST00000542570 SMIM5Q71RC9 77 aa12.18□□□□□ -0.46
TOP3A-208ENST00000542570 TRMT2AQ8IZ69 625 aaKnown RBP12.18□□□□□ -0.46
TOP3A-208ENST00000542570 RNF214Q8ND24 703 aa12.18□□□□□ -0.46
TOP3A-208ENST00000542570 ANKIB1Q9P2G1 1089 aa12.18□□□□□ -0.46
TOP3A-208ENST00000542570 ERBB3P21860 1342 aa12.18□□□□□ -0.46
TOP3A-208ENST00000542570 INSRP06213 1382 aa12.18□□□□□ -0.46
TOP3A-208ENST00000542570 LRRFIP1Q32MZ4 808 aaKnown RBP12.18□□□□□ -0.46
TOP3A-208ENST00000542570 NOL10Q9BSC4 688 aaKnown RBP12.18□□□□□ -0.46
TOP3A-208ENST00000542570 USP44Q9H0E7 712 aa12.18□□□□□ -0.46
TOP3A-208ENST00000542570 SYNE3Q6ZMZ3 975 aa12.17□□□□□ -0.46
TOP3A-208ENST00000542570 PLEKHM2Q8IWE5 1019 aa12.17□□□□□ -0.46
TOP3A-208ENST00000542570 SMC5Q8IY18 1101 aa12.17□□□□□ -0.46
TOP3A-208ENST00000542570 RASSF8Q8NHQ8 419 aa12.17□□□□□ -0.46
TOP3A-208ENST00000542570 IGSF1Q8N6C5 1336 aa12.17□□□□□ -0.46
TOP3A-208ENST00000542570 CPA1P15085 419 aa12.17□□□□□ -0.46
TOP3A-208ENST00000542570 RFC4P35249 363 aa12.17□□□□□ -0.46
TOP3A-208ENST00000542570 ATP2B2Q01814 1243 aa12.17□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms