RNA–Protein interactions for RNA: ENST00000542555.1

CLPB-211, Transcript of ClpB homolog, mitochondrial AAA ATPase chaperonin, humanhuman

TSL 2

Gene CLPB, Length 421 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLPB-211ENST00000542555 LRP5O75197 1615 aa11.96□□□□□ -0.5
CLPB-211ENST00000542555 PXDNQ92626 1479 aa11.95□□□□□ -0.5
CLPB-211ENST00000542555 CCDC144AA2RUR9 1427 aa11.95□□□□□ -0.5
CLPB-211ENST00000542555 TNKS1BP1Q9C0C2 1729 aaKnown RBP11.95□□□□□ -0.5
CLPB-211ENST00000542555 HRCP23327 699 aa11.95□□□□□ -0.5
CLPB-211ENST00000542555 MMP16P51512 607 aa11.95□□□□□ -0.5
CLPB-211ENST00000542555 CCDC24Q8N4L8 307 aa11.95□□□□□ -0.5
CLPB-211ENST00000542555 CDC42BPGQ6DT37 1551 aa11.95□□□□□ -0.5
CLPB-211ENST00000542555 PHOX2BQ99453 314 aa11.94□□□□□ -0.5
CLPB-211ENST00000542555 USB1Q9BQ65 265 aaKnown RBP11.94□□□□□ -0.5
CLPB-211ENST00000542555 SLIT2O94813 1529 aa11.94□□□□□ -0.5
CLPB-211ENST00000542555 NAIPQ13075 1403 aa11.94□□□□□ -0.5
CLPB-211ENST00000542555 PRAG1Q86YV5 1406 aa11.94□□□□□ -0.5
CLPB-211ENST00000542555 CLTCL1P53675 1640 aa11.93□□□□□ -0.5
CLPB-211ENST00000542555 HPS1Q92902 700 aa11.93□□□□□ -0.5
CLPB-211ENST00000542555 GLI3P10071 1580 aa11.92□□□□□ -0.5
CLPB-211ENST00000542555 GPR37O15354 613 aa11.92□□□□□ -0.5
CLPB-211ENST00000542555 R3HDM1Q15032 1099 aaKnown RBP11.91□□□□□ -0.5
CLPB-211ENST00000542555 WAPLQ7Z5K2 1190 aa11.91□□□□□ -0.5
CLPB-211ENST00000542555 SLC16A10Q8TF71 515 aa11.91□□□□□ -0.5
CLPB-211ENST00000542555 ARHGEF10O15013 1369 aa11.91□□□□□ -0.5
CLPB-211ENST00000542555 FAM181BA6NEQ2 426 aa11.9□□□□□ -0.5
CLPB-211ENST00000542555 YY1P25490 414 aa11.9□□□□□ -0.5
CLPB-211ENST00000542555 RC3H1Q5TC82 1133 aaKnown RBP11.9□□□□□ -0.5
CLPB-211ENST00000542555 USP32Q8NFA0 1604 aa11.89□□□□□ -0.51
CLPB-211ENST00000542555 KDM4AO75164 1064 aa11.89□□□□□ -0.51
CLPB-211ENST00000542555 DXOO77932 396 aaKnown RBP11.89□□□□□ -0.51
CLPB-211ENST00000542555 CABLES1Q8TDN4 633 aa11.89□□□□□ -0.51
CLPB-211ENST00000542555 KIF1AQ12756 1690 aa11.89□□□□□ -0.51
CLPB-211ENST00000542555 BRWD3Q6RI45 1802 aa11.88□□□□□ -0.51
CLPB-211ENST00000542555 TNS3Q68CZ2 1445 aa11.88□□□□□ -0.51
CLPB-211ENST00000542555 GPIHBP1Q8IV16 184 aa11.88□□□□□ -0.51
CLPB-211ENST00000542555 PPP1R1BQ9UD71 204 aaPredicted RBP11.88□□□□□ -0.51
CLPB-211ENST00000542555 WNT7BP56706 349 aa11.87□□□□□ -0.51
CLPB-211ENST00000542555 NBPF8Q3BBV2 869 aa11.87□□□□□ -0.51
CLPB-211ENST00000542555 RGL3Q3MIN7 710 aa11.87□□□□□ -0.51
CLPB-211ENST00000542555 NBPF14Q5TI25 921 aa11.87□□□□□ -0.51
CLPB-211ENST00000542555 NWD2Q9ULI1 1742 aa11.86□□□□□ -0.51
CLPB-211ENST00000542555 ALDH1A1P00352 501 aa11.86□□□□□ -0.51
CLPB-211ENST00000542555 BTG4Q9NY30 223 aa11.86□□□□□ -0.51
CLPB-211ENST00000542555 SBNO1A3KN83 1393 aa11.86□□□□□ -0.51
CLPB-211ENST00000542555 ABCC11Q96J66 1382 aa11.86□□□□□ -0.51
CLPB-211ENST00000542555 SRCAPQ6ZRS2 3230 aa11.85□□□□□ -0.51
CLPB-211ENST00000542555 ANKRD30BQ9BXX2 1392 aa11.85□□□□□ -0.51
CLPB-211ENST00000542555 FAM83GA6ND36 823 aa11.85□□□□□ -0.51
CLPB-211ENST00000542555 CD46P15529 392 aa11.85□□□□□ -0.51
CLPB-211ENST00000542555 TMEM132EQ6IEE7 984 aa11.85□□□□□ -0.51
CLPB-211ENST00000542555 GPRASP1Q5JY77 1395 aa11.84□□□□□ -0.51
CLPB-211ENST00000542555 USP46P62068 366 aa11.84□□□□□ -0.51
CLPB-211ENST00000542555 SIRT1Q96EB6 747 aa11.84□□□□□ -0.51
CLPB-211ENST00000542555 TECPR2O15040 1411 aa11.84□□□□□ -0.51
CLPB-211ENST00000542555 RRBP1Q9P2E9 1410 aaKnown RBP11.84□□□□□ -0.51
CLPB-211ENST00000542555 ADGRF5Q8IZF2 1346 aa11.84□□□□□ -0.51
CLPB-211ENST00000542555 RGPD1P0DJD0 1748 aa11.83□□□□□ -0.52
CLPB-211ENST00000542555 APBA3O96018 575 aa11.83□□□□□ -0.52
CLPB-211ENST00000542555 EZH2Q15910 746 aaKnown RBP11.83□□□□□ -0.52
CLPB-211ENST00000542555 LCE2CQ5TA81 110 aa11.83□□□□□ -0.52
CLPB-211ENST00000542555 FAM196AQ6ZSG2 479 aa11.83□□□□□ -0.52
CLPB-211ENST00000542555 POGKQ9P215 609 aa11.83□□□□□ -0.52
CLPB-211ENST00000542555 PLCH1Q4KWH8 1693 aa11.83□□□□□ -0.52
CLPB-211ENST00000542555 FMN2Q9NZ56 1722 aa11.83□□□□□ -0.52
CLPB-211ENST00000542555 PPLO60437 1756 aa11.82□□□□□ -0.52
CLPB-211ENST00000542555 DHX57Q6P158 1386 aaKnown RBP11.82□□□□□ -0.52
CLPB-211ENST00000542555 SKOR1P84550 965 aa11.82□□□□□ -0.52
CLPB-211ENST00000542555 PMFBP1Q8TBY8 1022 aa11.82□□□□□ -0.52
CLPB-211ENST00000542555 NXF1Q9UBU9 619 aaKnown RBP11.82□□□□□ -0.52
CLPB-211ENST00000542555 PARD3Q8TEW0 1356 aa11.81□□□□□ -0.52
CLPB-211ENST00000542555 ADGRB2O60241 1585 aa11.81□□□□□ -0.52
CLPB-211ENST00000542555 YTHDC2Q9H6S0 1430 aaKnown RBP11.81□□□□□ -0.52
CLPB-211ENST00000542555 TRIM37O94972 964 aa11.81□□□□□ -0.52
CLPB-211ENST00000542555 PDE3BQ13370 1112 aa11.81□□□□□ -0.52
CLPB-211ENST00000542555 FAM182BQ5T319 152 aa11.81□□□□□ -0.52
CLPB-211ENST00000542555 PRDM11Q9NQV5 511 aa11.81□□□□□ -0.52
CLPB-211ENST00000542555 PLEKHH1Q9ULM0 1364 aa11.8□□□□□ -0.52
CLPB-211ENST00000542555 EP400Q96L91 3159 aa11.8□□□□□ -0.52
CLPB-211ENST00000542555 DISP2A7MBM2 1401 aa11.8□□□□□ -0.52
CLPB-211ENST00000542555 SAFB2Q14151 953 aaKnown RBP eCLIP11.8□□□□□ -0.52
CLPB-211ENST00000542555 PPARGC1BQ86YN6 1023 aaKnown RBP11.8□□□□□ -0.52
CLPB-211ENST00000542555 SPON1Q9HCB6 807 aa11.8□□□□□ -0.52
CLPB-211ENST00000542555 WASF2Q9Y6W5 498 aa11.8□□□□□ -0.52
CLPB-211ENST00000542555 SPATA31A5Q5VU36 1347 aa11.8□□□□□ -0.52
CLPB-211ENST00000542555 SPATA31A7Q8IWB4 1347 aa11.8□□□□□ -0.52
CLPB-211ENST00000542555 EIF3AQ14152 1382 aaKnown RBP11.79□□□□□ -0.52
CLPB-211ENST00000542555 NRXN1Q9ULB1 1477 aa11.79□□□□□ -0.52
CLPB-211ENST00000542555 EVA1CP58658 441 aa11.79□□□□□ -0.52
CLPB-211ENST00000542555 EHBP1Q8NDI1 1231 aa11.79□□□□□ -0.52
CLPB-211ENST00000542555 KNDC1Q76NI1 1749 aa11.78□□□□□ -0.52
CLPB-211ENST00000542555 NGDNQ8NEJ9 315 aaKnown RBP11.78□□□□□ -0.52
CLPB-211ENST00000542555 IRF7Q92985 503 aa11.78□□□□□ -0.52
CLPB-211ENST00000542555 PRAM1Q96QH2 718 aa11.78□□□□□ -0.52
CLPB-211ENST00000542555 CAMKK2Q96RR4 588 aa11.78□□□□□ -0.52
CLPB-211ENST00000542555 ANKARQ7Z5J8 1434 aa11.77□□□□□ -0.52
CLPB-211ENST00000542555 COL14A1Q05707 1796 aaKnown RBP11.77□□□□□ -0.52
CLPB-211ENST00000542555 CAPN5O15484 640 aaPredicted RBP11.77□□□□□ -0.53
CLPB-211ENST00000542555 HLA-CQ95604 372 aa11.77□□□□□ -0.53
CLPB-211ENST00000542555 STRN4Q9NRL3 753 aa11.77□□□□□ -0.53
CLPB-211ENST00000542555 HOXA2O43364 376 aa11.76□□□□□ -0.53
CLPB-211ENST00000542555 JUNDP17535 347 aa11.76□□□□□ -0.53
CLPB-211ENST00000542555 MDM2Q00987 491 aaPredicted RBP11.76□□□□□ -0.53
CLPB-211ENST00000542555 C14orf93Q9H972 538 aaKnown RBP11.76□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 52 ms