RNA–Protein interactions for RNA: ENST00000542381.1

SRGAP1-204, Transcript of SLIT-ROBO Rho GTPase activating protein 1, humanhuman

TSL 2

Gene SRGAP1, Length 360 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP1-204ENST00000542381 GRIN2CQ14957 1233 aa11.05□□□□□ -0.64
SRGAP1-204ENST00000542381 NLRP8Q86W28 1048 aa11.05□□□□□ -0.64
SRGAP1-204ENST00000542381 ZNF295-AS1Q8N0V1 137 aa11.05□□□□□ -0.64
SRGAP1-204ENST00000542381 USP3Q9Y6I4 520 aa11.05□□□□□ -0.64
SRGAP1-204ENST00000542381 TMEM229AB2RXF0 380 aa11.04□□□□□ -0.64
SRGAP1-204ENST00000542381 ATXN7O15265 892 aaPredicted RBP11.04□□□□□ -0.64
SRGAP1-204ENST00000542381 ARAFP10398 606 aa11.04□□□□□ -0.64
SRGAP1-204ENST00000542381 BAG6P46379 1132 aa11.04□□□□□ -0.64
SRGAP1-204ENST00000542381 C1orf216Q8TAB5 229 aa11.04□□□□□ -0.64
SRGAP1-204ENST00000542381 A0A1W2PNR3 127 aa11.03□□□□□ -0.64
SRGAP1-204ENST00000542381 DCDC2BA2VCK2 349 aa11.03□□□□□ -0.64
SRGAP1-204ENST00000542381 SEMA3FQ13275 785 aa11.03□□□□□ -0.64
SRGAP1-204ENST00000542381 KLF15Q9UIH9 416 aa11.03□□□□□ -0.64
SRGAP1-204ENST00000542381 IQSEC3Q9UPP2 1182 aaPredicted RBP11.03□□□□□ -0.64
SRGAP1-204ENST00000542381 MAPTP10636 758 aaKnown RBP11.02□□□□□ -0.65
SRGAP1-204ENST00000542381 TNP2Q05952 138 aa11.02□□□□□ -0.65
SRGAP1-204ENST00000542381 WASHC4Q2M389 1173 aa11.02□□□□□ -0.65
SRGAP1-204ENST00000542381 ARSJQ5FYB0 599 aaPredicted RBP11.02□□□□□ -0.65
SRGAP1-204ENST00000542381 ALYREFQ86V81 257 aaKnown RBP11.02□□□□□ -0.65
SRGAP1-204ENST00000542381 SLC4A9Q96Q91 983 aa11.02□□□□□ -0.65
SRGAP1-204ENST00000542381 A6NJY4 79 aa11.01□□□□□ -0.65
SRGAP1-204ENST00000542381 K7ELQ4 463 aaPredicted RBP11.01□□□□□ -0.65
SRGAP1-204ENST00000542381 PIK3CDO00329 1044 aa11.01□□□□□ -0.65
SRGAP1-204ENST00000542381 CD33P20138 364 aa11.01□□□□□ -0.65
SRGAP1-204ENST00000542381 CDK2AP1O14519 115 aa11□□□□□ -0.65
SRGAP1-204ENST00000542381 GNB5O14775 395 aa11□□□□□ -0.65
SRGAP1-204ENST00000542381 DGKGP49619 791 aa11□□□□□ -0.65
SRGAP1-204ENST00000542381 MTFR1Q15390 333 aa11□□□□□ -0.65
SRGAP1-204ENST00000542381 XP32Q5T750 250 aa11□□□□□ -0.65
SRGAP1-204ENST00000542381 PCDHGA11Q9Y5H2 935 aa11□□□□□ -0.65
SRGAP1-204ENST00000542381 KHNYNO15037 678 aaKnown RBP10.99□□□□□ -0.65
SRGAP1-204ENST00000542381 FURINP09958 794 aa10.99□□□□□ -0.65
SRGAP1-204ENST00000542381 NBPF1Q3BBV0 1214 aa10.99□□□□□ -0.65
SRGAP1-204ENST00000542381 ZIC5Q96T25 663 aa10.99□□□□□ -0.65
SRGAP1-204ENST00000542381 CHSY3Q70JA7 882 aa10.98□□□□□ -0.65
SRGAP1-204ENST00000542381 CABP1Q9NZU7 370 aa10.98□□□□□ -0.65
SRGAP1-204ENST00000542381 PARP3Q9Y6F1 533 aa10.98□□□□□ -0.65
SRGAP1-204ENST00000542381 C1QTNF9BB2RNN3 333 aa10.97□□□□□ -0.65
SRGAP1-204ENST00000542381 FAM182BQ5T319 152 aa10.97□□□□□ -0.65
SRGAP1-204ENST00000542381 FCHSD1Q86WN1 690 aa10.97□□□□□ -0.65
SRGAP1-204ENST00000542381 TATP17735 454 aaPredicted RBP10.96□□□□□ -0.65
SRGAP1-204ENST00000542381 ADH6P28332 368 aa10.96□□□□□ -0.65
SRGAP1-204ENST00000542381 SOX11P35716 441 aa10.96□□□□□ -0.65
SRGAP1-204ENST00000542381 MCM6Q14566 821 aa10.96□□□□□ -0.65
SRGAP1-204ENST00000542381 CD163Q86VB7 1156 aa10.96□□□□□ -0.65
SRGAP1-204ENST00000542381 ZDHHC3Q9NYG2 299 aa10.96□□□□□ -0.65
SRGAP1-204ENST00000542381 PCBP4P57723 403 aaKnown RBP10.95□□□□□ -0.66
SRGAP1-204ENST00000542381 STRN4Q9NRL3 753 aa10.95□□□□□ -0.66
SRGAP1-204ENST00000542381 PIK3R2O00459 728 aa10.94□□□□□ -0.66
SRGAP1-204ENST00000542381 TXLNAP40222 546 aa10.94□□□□□ -0.66
SRGAP1-204ENST00000542381 GJA3Q9Y6H8 435 aa10.94□□□□□ -0.66
SRGAP1-204ENST00000542381 FAM157BP0CG42 384 aa10.93□□□□□ -0.66
SRGAP1-204ENST00000542381 SKIP12755 728 aa10.93□□□□□ -0.66
SRGAP1-204ENST00000542381 CHRNA4P43681 627 aa10.93□□□□□ -0.66
SRGAP1-204ENST00000542381 BICDL1Q6ZP65 573 aa10.93□□□□□ -0.66
SRGAP1-204ENST00000542381 SERBP1Q8NC51 408 aaKnown RBP eCLIP10.93□□□□□ -0.66
SRGAP1-204ENST00000542381 EML3Q32P44 896 aa10.92□□□□□ -0.66
SRGAP1-204ENST00000542381 ZDHHC1Q8WTX9 485 aa10.92□□□□□ -0.66
SRGAP1-204ENST00000542381 AVENQ9NQS1 362 aaPredicted RBP10.92□□□□□ -0.66
SRGAP1-204ENST00000542381 COG6Q9Y2V7 657 aa10.92□□□□□ -0.66
SRGAP1-204ENST00000542381 GTF2IP78347 998 aa10.91□□□□□ -0.66
SRGAP1-204ENST00000542381 ZNF468Q5VIY5 522 aaPredicted RBP10.91□□□□□ -0.66
SRGAP1-204ENST00000542381 ALG2Q9H553 416 aa10.91□□□□□ -0.66
SRGAP1-204ENST00000542381 ZNF358Q9NW07 568 aa10.91□□□□□ -0.66
SRGAP1-204ENST00000542381 NOP53Q9NZM5 478 aaKnown RBP10.91□□□□□ -0.66
SRGAP1-204ENST00000542381 MARK1Q9P0L2 795 aa10.91□□□□□ -0.66
SRGAP1-204ENST00000542381 SCHIP1Q9P0W5 487 aaPredicted RBP10.91□□□□□ -0.66
SRGAP1-204ENST00000542381 PRR12Q9ULL5 1215 aa10.91□□□□□ -0.66
SRGAP1-204ENST00000542381 NOD1Q9Y239 953 aa10.91□□□□□ -0.66
SRGAP1-204ENST00000542381 BACH1O14867 736 aa10.9□□□□□ -0.66
SRGAP1-204ENST00000542381 EFSO43281 561 aa10.9□□□□□ -0.66
SRGAP1-204ENST00000542381 SAMD5Q5TGI4 173 aa10.9□□□□□ -0.66
SRGAP1-204ENST00000542381 NCOA4Q13772 614 aa10.89□□□□□ -0.67
SRGAP1-204ENST00000542381 L3MBTL2Q969R5 705 aa10.89□□□□□ -0.67
SRGAP1-204ENST00000542381 TRIM11Q96F44 468 aa10.89□□□□□ -0.67
SRGAP1-204ENST00000542381 PSME1Q06323 249 aa10.88□□□□□ -0.67
SRGAP1-204ENST00000542381 TBCELQ5QJ74 424 aa10.88□□□□□ -0.67
SRGAP1-204ENST00000542381 LRRC69Q6ZNQ3 347 aa10.87□□□□□ -0.67
SRGAP1-204ENST00000542381 DEPDC4Q8N2C3 294 aa10.87□□□□□ -0.67
SRGAP1-204ENST00000542381 PLVAPQ9BX97 442 aa10.87□□□□□ -0.67
SRGAP1-204ENST00000542381 NOS2P35228 1153 aa10.86□□□□□ -0.67
SRGAP1-204ENST00000542381 EPHA4P54764 986 aa10.86□□□□□ -0.67
SRGAP1-204ENST00000542381 LAMC2Q13753 1193 aa10.86□□□□□ -0.67
SRGAP1-204ENST00000542381 TEAD4Q15561 434 aa10.86□□□□□ -0.67
SRGAP1-204ENST00000542381 TNS4Q8IZW8 715 aa10.86□□□□□ -0.67
SRGAP1-204ENST00000542381 LZTS3O60299 673 aaPredicted RBP10.85□□□□□ -0.67
SRGAP1-204ENST00000542381 SYT9Q86SS6 491 aa10.85□□□□□ -0.67
SRGAP1-204ENST00000542381 C7orf43Q8WVR3 580 aa10.85□□□□□ -0.67
SRGAP1-204ENST00000542381 EML1O00423 815 aa10.84□□□□□ -0.67
SRGAP1-204ENST00000542381 DOC2BQ14184 412 aa10.84□□□□□ -0.67
SRGAP1-204ENST00000542381 SH3PXD2AQ5TCZ1 1133 aa10.84□□□□□ -0.67
SRGAP1-204ENST00000542381 SLC9A9Q8IVB4 645 aa10.84□□□□□ -0.67
SRGAP1-204ENST00000542381 Q8N3U1 123 aa10.84□□□□□ -0.67
SRGAP1-204ENST00000542381 NFATC2IPQ8NCF5 419 aa10.84□□□□□ -0.67
SRGAP1-204ENST00000542381 POM121Q96HA1 1249 aa10.84□□□□□ -0.67
SRGAP1-204ENST00000542381 ELOA3CA0A087WX78 387 aaPredicted RBP10.83□□□□□ -0.68
SRGAP1-204ENST00000542381 ELOA3DA6NLF2 546 aaPredicted RBP10.83□□□□□ -0.68
SRGAP1-204ENST00000542381 ITGB7P26010 798 aa10.83□□□□□ -0.68
SRGAP1-204ENST00000542381 ELOA3BQ3SY89 546 aa10.83□□□□□ -0.68
SRGAP1-204ENST00000542381 ELOA3Q8NG57 546 aa10.83□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 75.5 ms