RNA–Protein interactions for RNA: ENST00000542355.6

SCG3-202, Transcript of secretogranin III, humanhuman

TSL 2 BASIC

Gene SCG3, Length 2,163 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCG3-202ENST00000542355 CCT4P50991 539 aaKnown RBP13.89□□□□□ -0.19
SCG3-202ENST00000542355 FMNL2Q96PY5 1086 aa13.89□□□□□ -0.19
SCG3-202ENST00000542355 SCN11AQ9UI33 1791 aa13.88□□□□□ -0.19
SCG3-202ENST00000542355 NGLY1Q96IV0 654 aa13.88□□□□□ -0.19
SCG3-202ENST00000542355 MRC1P22897 1456 aa13.88□□□□□ -0.19
SCG3-202ENST00000542355 DISP2A7MBM2 1401 aa13.88□□□□□ -0.19
SCG3-202ENST00000542355 SNRPA1P09661 255 aaKnown RBP13.88□□□□□ -0.19
SCG3-202ENST00000542355 PROSER3Q2NL68 480 aa13.88□□□□□ -0.19
SCG3-202ENST00000542355 RGS3P49796 1198 aa13.87□□□□□ -0.19
SCG3-202ENST00000542355 MEIS3Q99687 375 aa13.87□□□□□ -0.19
SCG3-202ENST00000542355 THRAP3Q9Y2W1 955 aaKnown RBP13.87□□□□□ -0.19
SCG3-202ENST00000542355 USP16Q9Y5T5 823 aa13.87□□□□□ -0.19
SCG3-202ENST00000542355 SIPA1L3O60292 1781 aaPredicted RBP13.87□□□□□ -0.19
SCG3-202ENST00000542355 VIRMAQ69YN4 1812 aaKnown RBP13.86□□□□□ -0.19
SCG3-202ENST00000542355 UNC5CLQ8IV45 518 aa13.86□□□□□ -0.19
SCG3-202ENST00000542355 CDCA7Q9BWT1 371 aaPredicted RBP13.86□□□□□ -0.19
SCG3-202ENST00000542355 TMOD3Q9NYL9 352 aa13.86□□□□□ -0.19
SCG3-202ENST00000542355 SPATA31A5Q5VU36 1347 aa13.85□□□□□ -0.19
SCG3-202ENST00000542355 SPATA31A7Q8IWB4 1347 aa13.85□□□□□ -0.19
SCG3-202ENST00000542355 PI4KAP2A4QPH2 592 aa13.85□□□□□ -0.19
SCG3-202ENST00000542355 HSPA1LP34931 641 aa13.85□□□□□ -0.19
SCG3-202ENST00000542355 PI4KAP1Q8N8J0 262 aa13.85□□□□□ -0.19
SCG3-202ENST00000542355 DDX21Q9NR30 783 aaKnown RBP eCLIP13.85□□□□□ -0.19
SCG3-202ENST00000542355 HYPKQ9NX55 129 aa13.85□□□□□ -0.19
SCG3-202ENST00000542355 SLIT2O94813 1529 aa13.85□□□□□ -0.19
SCG3-202ENST00000542355 PTCD1O75127 700 aaKnown RBP13.85□□□□□ -0.19
SCG3-202ENST00000542355 PDIA6Q15084 440 aa13.85□□□□□ -0.19
SCG3-202ENST00000542355 DDB1Q16531 1140 aa13.85□□□□□ -0.19
SCG3-202ENST00000542355 SIRT2Q8IXJ6 389 aa13.85□□□□□ -0.19
SCG3-202ENST00000542355 PDZRN3Q9UPQ7 1066 aa13.85□□□□□ -0.19
SCG3-202ENST00000542355 ECM2O94769 699 aaPredicted RBP13.84□□□□□ -0.19
SCG3-202ENST00000542355 MYL6BP14649 208 aa13.84□□□□□ -0.19
SCG3-202ENST00000542355 SPATA31A6Q5VVP1 1343 aa13.84□□□□□ -0.19
SCG3-202ENST00000542355 AIMP1Q12904 312 aaKnown RBP13.83□□□□□ -0.19
SCG3-202ENST00000542355 DNAAF4Q8WXU2 420 aa13.83□□□□□ -0.19
SCG3-202ENST00000542355 PIGBQ92521 554 aa13.83□□□□□ -0.19
SCG3-202ENST00000542355 PLCH1Q4KWH8 1693 aa13.83□□□□□ -0.2
SCG3-202ENST00000542355 SMC5Q8IY18 1101 aa13.83□□□□□ -0.2
SCG3-202ENST00000542355 RBM19Q9Y4C8 960 aaKnown RBP13.83□□□□□ -0.2
SCG3-202ENST00000542355 PIP4K2AP48426 406 aaPredicted RBP13.82□□□□□ -0.2
SCG3-202ENST00000542355 BARGINQ6ZT62 677 aa13.82□□□□□ -0.2
SCG3-202ENST00000542355 SYTL4Q96C24 671 aaPredicted RBP13.82□□□□□ -0.2
SCG3-202ENST00000542355 SRCIN1Q9C0H9 1055 aa13.82□□□□□ -0.2
SCG3-202ENST00000542355 ASAP1Q9ULH1 1129 aa13.82□□□□□ -0.2
SCG3-202ENST00000542355 SHANK3Q9BYB0 1731 aa13.82□□□□□ -0.2
SCG3-202ENST00000542355 FNBP4Q8N3X1 1017 aaPredicted RBP13.82□□□□□ -0.2
SCG3-202ENST00000542355 MAP3K2Q9Y2U5 619 aa13.82□□□□□ -0.2
SCG3-202ENST00000542355 BEND3Q5T5X7 828 aa13.81□□□□□ -0.2
SCG3-202ENST00000542355 KSR2Q6VAB6 950 aa13.81□□□□□ -0.2
SCG3-202ENST00000542355 RPAP2Q8IXW5 612 aaPredicted RBP13.81□□□□□ -0.2
SCG3-202ENST00000542355 BCL9LQ86UU0 1499 aa13.81□□□□□ -0.2
SCG3-202ENST00000542355 ADCY9O60503 1353 aa13.81□□□□□ -0.2
SCG3-202ENST00000542355 DDX58O95786 925 aaKnown RBP13.81□□□□□ -0.2
SCG3-202ENST00000542355 GNAI3P08754 354 aa13.81□□□□□ -0.2
SCG3-202ENST00000542355 VPS72Q15906 364 aa13.81□□□□□ -0.2
SCG3-202ENST00000542355 FAM98CQ17RN3 349 aaKnown RBP13.81□□□□□ -0.2
SCG3-202ENST00000542355 CEP85Q6P2H3 762 aa13.81□□□□□ -0.2
SCG3-202ENST00000542355 COPS6Q7L5N1 327 aa13.81□□□□□ -0.2
SCG3-202ENST00000542355 ANKRD44Q8N8A2 993 aa13.81□□□□□ -0.2
SCG3-202ENST00000542355 USP44Q9H0E7 712 aa13.81□□□□□ -0.2
SCG3-202ENST00000542355 USP21Q9UK80 565 aa13.81□□□□□ -0.2
SCG3-202ENST00000542355 NRAPQ86VF7 1730 aa13.8□□□□□ -0.2
SCG3-202ENST00000542355 TNS2Q63HR2 1409 aa13.8□□□□□ -0.2
SCG3-202ENST00000542355 GNAI2P04899 355 aa13.8□□□□□ -0.2
SCG3-202ENST00000542355 PRIM1P49642 420 aaKnown RBP13.8□□□□□ -0.2
SCG3-202ENST00000542355 MEX3CQ5U5Q3 659 aaKnown RBP13.8□□□□□ -0.2
SCG3-202ENST00000542355 XAGE3Q8WTP9 111 aa13.8□□□□□ -0.2
SCG3-202ENST00000542355 GCC1Q96CN9 775 aa13.8□□□□□ -0.2
SCG3-202ENST00000542355 ATG3Q9NT62 314 aa13.8□□□□□ -0.2
SCG3-202ENST00000542355 MARCH10Q8NA82 808 aaPredicted RBP13.79□□□□□ -0.2
SCG3-202ENST00000542355 PDE4AP27815 886 aa13.79□□□□□ -0.2
SCG3-202ENST00000542355 MAPK8IP2Q13387 824 aaPredicted RBP13.79□□□□□ -0.2
SCG3-202ENST00000542355 RIC3Q7Z5B4 369 aa13.79□□□□□ -0.2
SCG3-202ENST00000542355 LRP6O75581 1613 aa13.78□□□□□ -0.2
SCG3-202ENST00000542355 A0A0G2JS52 829 aa13.78□□□□□ -0.2
SCG3-202ENST00000542355 RGL2O15211 777 aa13.78□□□□□ -0.2
SCG3-202ENST00000542355 ANKRD45Q5TZF3 282 aa13.78□□□□□ -0.2
SCG3-202ENST00000542355 LRP10Q7Z4F1 713 aa13.78□□□□□ -0.2
SCG3-202ENST00000542355 RBM42Q9BTD8 480 aaKnown RBP13.78□□□□□ -0.2
SCG3-202ENST00000542355 PXDNLA1KZ92 1463 aa13.78□□□□□ -0.2
SCG3-202ENST00000542355 A1BGP04217 495 aa13.78□□□□□ -0.2
SCG3-202ENST00000542355 UBTFL1P0CB47 393 aaPredicted RBP13.78□□□□□ -0.2
SCG3-202ENST00000542355 NUCB1Q02818 461 aa13.78□□□□□ -0.2
SCG3-202ENST00000542355 ACSBG1Q96GR2 724 aa13.78□□□□□ -0.2
SCG3-202ENST00000542355 ATP10DQ9P241 1426 aa13.77□□□□□ -0.2
SCG3-202ENST00000542355 CACNA1FO60840 1977 aa13.77□□□□□ -0.2
SCG3-202ENST00000542355 NBPF26B4DH59 902 aa13.77□□□□□ -0.21
SCG3-202ENST00000542355 NBPF14Q5TI25 921 aa13.77□□□□□ -0.21
SCG3-202ENST00000542355 NBPF10Q6P3W6 841 aaKnown RBP13.77□□□□□ -0.21
SCG3-202ENST00000542355 ANKRD13DQ6ZTN6 518 aa13.77□□□□□ -0.21
SCG3-202ENST00000542355 NBPF15Q8N660 670 aa13.77□□□□□ -0.21
SCG3-202ENST00000542355 LNPKQ9C0E8 428 aa13.77□□□□□ -0.21
SCG3-202ENST00000542355 NWD2Q9ULI1 1742 aa13.77□□□□□ -0.21
SCG3-202ENST00000542355 KCPQ6ZWJ8 1503 aa13.77□□□□□ -0.21
SCG3-202ENST00000542355 CWF19L2Q2TBE0 894 aaKnown RBP13.76□□□□□ -0.21
SCG3-202ENST00000542355 CHD1LQ86WJ1 897 aa13.76□□□□□ -0.21
SCG3-202ENST00000542355 DCTPP1Q9H773 170 aa13.76□□□□□ -0.21
SCG3-202ENST00000542355 LRRFIP2Q9Y608 721 aaKnown RBP13.76□□□□□ -0.21
SCG3-202ENST00000542355 BCL9O00512 1426 aa13.76□□□□□ -0.21
SCG3-202ENST00000542355 C5P01031 1676 aa13.76□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 129.2 ms