RNA–Protein interactions for RNA: ENST00000541948.2

NECAP1-205, Transcript of NECAP endocytosis associated 1, humanhuman

TSL 5

Gene NECAP1, Length 728 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NECAP1-205ENST00000541948 WWC3Q9ULE0 1092 aa10.31□□□□□ -0.76
NECAP1-205ENST00000541948 KDM3BQ7LBC6 1761 aa10.31□□□□□ -0.76
NECAP1-205ENST00000541948 USP42Q9H9J4 1324 aaKnown RBP10.31□□□□□ -0.76
NECAP1-205ENST00000541948 AFDNP55196 1824 aaKnown RBP10.3□□□□□ -0.76
NECAP1-205ENST00000541948 NRXN2Q9P2S2 1712 aa10.3□□□□□ -0.76
NECAP1-205ENST00000541948 HEG1Q9ULI3 1381 aa10.3□□□□□ -0.76
NECAP1-205ENST00000541948 FCHSD2O94868 740 aa10.3□□□□□ -0.76
NECAP1-205ENST00000541948 GPR162Q16538 588 aa10.3□□□□□ -0.76
NECAP1-205ENST00000541948 ZNF790Q6PG37 636 aa10.3□□□□□ -0.76
NECAP1-205ENST00000541948 CD2APQ9Y5K6 639 aa10.3□□□□□ -0.76
NECAP1-205ENST00000541948 C10orf71Q711Q0 1435 aa10.3□□□□□ -0.76
NECAP1-205ENST00000541948 CCDC87Q9NVE4 849 aa10.29□□□□□ -0.76
NECAP1-205ENST00000541948 SCN7AQ01118 1682 aa10.28□□□□□ -0.76
NECAP1-205ENST00000541948 NCBP3Q53F19 620 aaKnown RBP10.28□□□□□ -0.76
NECAP1-205ENST00000541948 ZNF784Q8NCA9 323 aaPredicted RBP10.28□□□□□ -0.76
NECAP1-205ENST00000541948 THUMPD2Q9BTF0 503 aaKnown RBP10.28□□□□□ -0.76
NECAP1-205ENST00000541948 COL15A1P39059 1388 aa10.27□□□□□ -0.76
NECAP1-205ENST00000541948 BCORQ6W2J9 1755 aa10.27□□□□□ -0.77
NECAP1-205ENST00000541948 KCNA3P22001 575 aa10.27□□□□□ -0.77
NECAP1-205ENST00000541948 TM4SF1P30408 202 aa10.27□□□□□ -0.77
NECAP1-205ENST00000541948 RFC4P35249 363 aa10.27□□□□□ -0.77
NECAP1-205ENST00000541948 PIP4K2AP48426 406 aaPredicted RBP10.27□□□□□ -0.77
NECAP1-205ENST00000541948 EIF5P55010 431 aaKnown RBP10.27□□□□□ -0.77
NECAP1-205ENST00000541948 USPL1Q5W0Q7 1092 aa10.27□□□□□ -0.77
NECAP1-205ENST00000541948 PELP1Q8IZL8 1130 aaKnown RBP10.27□□□□□ -0.77
NECAP1-205ENST00000541948 VSIG10Q8N0Z9 540 aa10.27□□□□□ -0.77
NECAP1-205ENST00000541948 MIS18AQ9NYP9 233 aa10.27□□□□□ -0.77
NECAP1-205ENST00000541948 NUDCQ9Y266 331 aa10.27□□□□□ -0.77
NECAP1-205ENST00000541948 USP16Q9Y5T5 823 aa10.27□□□□□ -0.77
NECAP1-205ENST00000541948 ANKRD31Q8N7Z5 1873 aa10.27□□□□□ -0.77
NECAP1-205ENST00000541948 A1BGP04217 495 aa10.26□□□□□ -0.77
NECAP1-205ENST00000541948 CANXP27824 592 aaKnown RBP10.26□□□□□ -0.77
NECAP1-205ENST00000541948 DSG3P32926 999 aa10.26□□□□□ -0.77
NECAP1-205ENST00000541948 TEFQ10587 303 aa10.26□□□□□ -0.77
NECAP1-205ENST00000541948 NLGN1Q8N2Q7 840 aa10.26□□□□□ -0.77
NECAP1-205ENST00000541948 LAMB4A4D0S4 1761 aa10.26□□□□□ -0.77
NECAP1-205ENST00000541948 CARMIL3Q8ND23 1372 aa10.26□□□□□ -0.77
NECAP1-205ENST00000541948 A0A0G2JLW4 131 aa10.25□□□□□ -0.77
NECAP1-205ENST00000541948 BTBD11A6QL63 1104 aa10.25□□□□□ -0.77
NECAP1-205ENST00000541948 NBPF26B4DH59 902 aa10.25□□□□□ -0.77
NECAP1-205ENST00000541948 POLRMTO00411 1230 aaKnown RBP10.25□□□□□ -0.77
NECAP1-205ENST00000541948 NFIXQ14938 502 aa10.25□□□□□ -0.77
NECAP1-205ENST00000541948 RALBP1Q15311 655 aa10.25□□□□□ -0.77
NECAP1-205ENST00000541948 NBPF10Q6P3W6 841 aaKnown RBP10.25□□□□□ -0.77
NECAP1-205ENST00000541948 NBPF15Q8N660 670 aa10.25□□□□□ -0.77
NECAP1-205ENST00000541948 NARFQ9UHQ1 456 aa10.25□□□□□ -0.77
NECAP1-205ENST00000541948 DLEC1Q9Y238 1755 aa10.24□□□□□ -0.77
NECAP1-205ENST00000541948 GOLGB1Q14789 3259 aaKnown RBP10.24□□□□□ -0.77
NECAP1-205ENST00000541948 DPEP1P16444 411 aa10.24□□□□□ -0.77
NECAP1-205ENST00000541948 CCDC184Q52MB2 194 aa10.24□□□□□ -0.77
NECAP1-205ENST00000541948 TTC5Q8N0Z6 440 aa10.24□□□□□ -0.77
NECAP1-205ENST00000541948 COL11A2P13942 1736 aaPredicted RBP10.24□□□□□ -0.77
NECAP1-205ENST00000541948 HTATSF1O43719 755 aaKnown RBP10.23□□□□□ -0.77
NECAP1-205ENST00000541948 CHRNA5P30532 468 aa10.23□□□□□ -0.77
NECAP1-205ENST00000541948 NFE2L2Q16236 605 aa10.23□□□□□ -0.77
NECAP1-205ENST00000541948 FMNL2Q96PY5 1086 aa10.23□□□□□ -0.77
NECAP1-205ENST00000541948 PRKRIP1Q9H875 184 aaPredicted RBP10.23□□□□□ -0.77
NECAP1-205ENST00000541948 TBC1D2BQ9UPU7 963 aa10.23□□□□□ -0.77
NECAP1-205ENST00000541948 MYBBP1AQ9BQG0 1328 aaKnown RBP10.23□□□□□ -0.77
NECAP1-205ENST00000541948 ARFGEF1Q9Y6D6 1849 aa10.23□□□□□ -0.77
NECAP1-205ENST00000541948 NPM3O75607 178 aaKnown RBP10.22□□□□□ -0.77
NECAP1-205ENST00000541948 TBC1D9BQ66K14 1250 aa10.22□□□□□ -0.77
NECAP1-205ENST00000541948 CCDC146Q8IYE0 955 aa10.22□□□□□ -0.77
NECAP1-205ENST00000541948 ADCY9O60503 1353 aa10.22□□□□□ -0.77
NECAP1-205ENST00000541948 GIGYF1O75420 1035 aaPredicted RBP10.21□□□□□ -0.77
NECAP1-205ENST00000541948 CAMTA2O94983 1202 aa10.21□□□□□ -0.77
NECAP1-205ENST00000541948 IL6STP40189 918 aaPredicted RBP10.21□□□□□ -0.77
NECAP1-205ENST00000541948 C1QTNF8P60827 252 aa10.21□□□□□ -0.77
NECAP1-205ENST00000541948 TAF7Q15545 349 aaPredicted RBP10.21□□□□□ -0.77
NECAP1-205ENST00000541948 RRP7AQ9Y3A4 280 aaKnown RBP10.21□□□□□ -0.77
NECAP1-205ENST00000541948 PARP3Q9Y6F1 533 aa10.21□□□□□ -0.77
NECAP1-205ENST00000541948 ZPR1O75312 459 aa10.2□□□□□ -0.78
NECAP1-205ENST00000541948 STARD3NLO95772 234 aa10.2□□□□□ -0.78
NECAP1-205ENST00000541948 TMPOP42166 694 aaKnown RBP10.2□□□□□ -0.78
NECAP1-205ENST00000541948 EIF4A1P60842 406 aaKnown RBP10.2□□□□□ -0.78
NECAP1-205ENST00000541948 TGFB2P61812 414 aa10.2□□□□□ -0.78
NECAP1-205ENST00000541948 CCDC24Q8N4L8 307 aa10.2□□□□□ -0.78
NECAP1-205ENST00000541948 RTF1Q92541 710 aaKnown RBP10.2□□□□□ -0.78
NECAP1-205ENST00000541948 SPINK5Q9NQ38 1064 aaPredicted RBP10.2□□□□□ -0.78
NECAP1-205ENST00000541948 ADAMTS8Q9UP79 889 aa10.2□□□□□ -0.78
NECAP1-205ENST00000541948 TRIM35Q9UPQ4 493 aa10.2□□□□□ -0.78
NECAP1-205ENST00000541948 SERPINB2P05120 415 aa10.19□□□□□ -0.78
NECAP1-205ENST00000541948 SNRPA1P09661 255 aaKnown RBP10.19□□□□□ -0.78
NECAP1-205ENST00000541948 PRELPP51888 382 aa10.19□□□□□ -0.78
NECAP1-205ENST00000541948 BICDL1Q6ZP65 573 aa10.19□□□□□ -0.78
NECAP1-205ENST00000541948 TEX13AQ9BXU3 409 aaPredicted RBP10.19□□□□□ -0.78
NECAP1-205ENST00000541948 TNRC6CQ9HCJ0 1690 aaKnown RBP10.18□□□□□ -0.78
NECAP1-205ENST00000541948 ATP10DQ9P241 1426 aa10.18□□□□□ -0.78
NECAP1-205ENST00000541948 RIPK4P57078 832 aa10.18□□□□□ -0.78
NECAP1-205ENST00000541948 KRT24Q2M2I5 525 aa10.18□□□□□ -0.78
NECAP1-205ENST00000541948 LRP10Q7Z4F1 713 aa10.18□□□□□ -0.78
NECAP1-205ENST00000541948 BCS1LQ9Y276 419 aa10.18□□□□□ -0.78
NECAP1-205ENST00000541948 ZNF330Q9Y3S2 320 aaPredicted RBP10.18□□□□□ -0.78
NECAP1-205ENST00000541948 SBF1O95248 1867 aa10.18□□□□□ -0.78
NECAP1-205ENST00000541948 NUP98P52948 1817 aa10.18□□□□□ -0.78
NECAP1-205ENST00000541948 CACNA1SQ13698 1873 aa10.17□□□□□ -0.78
NECAP1-205ENST00000541948 HLFQ16534 295 aa10.17□□□□□ -0.78
NECAP1-205ENST00000541948 PRR5LQ6MZQ0 368 aa10.17□□□□□ -0.78
NECAP1-205ENST00000541948 DZIP3Q86Y13 1208 aaKnown RBP10.17□□□□□ -0.78
NECAP1-205ENST00000541948 MAPK8IP3Q9UPT6 1336 aa10.16□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms