RNA–Protein interactions for RNA: ENST00000541817.5

CHFR-220, Transcript of checkpoint with forkhead and ring finger domains, humanhuman

TSL 5

Gene CHFR, Length 758 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHFR-220ENST00000541817 CRKLP46109 303 aaKnown RBP13.78□□□□□ -0.2
CHFR-220ENST00000541817 MAP2K1Q02750 393 aaPredicted RBP13.78□□□□□ -0.2
CHFR-220ENST00000541817 USPL1Q5W0Q7 1092 aa13.78□□□□□ -0.2
CHFR-220ENST00000541817 CLEC11AQ9Y240 323 aa13.78□□□□□ -0.2
CHFR-220ENST00000541817 DICER1Q9UPY3 1922 aaKnown RBP13.78□□□□□ -0.2
CHFR-220ENST00000541817 C21orf2O43822 256 aa13.77□□□□□ -0.21
CHFR-220ENST00000541817 PTCD1O75127 700 aaKnown RBP13.77□□□□□ -0.21
CHFR-220ENST00000541817 LDHDQ86WU2 507 aa13.77□□□□□ -0.21
CHFR-220ENST00000541817 MCOLN1Q9GZU1 580 aa13.77□□□□□ -0.21
CHFR-220ENST00000541817 DLEC1Q9Y238 1755 aa13.76□□□□□ -0.21
CHFR-220ENST00000541817 RASSF10A6NK89 507 aa13.76□□□□□ -0.21
CHFR-220ENST00000541817 FYB1O15117 783 aa13.76□□□□□ -0.21
CHFR-220ENST00000541817 IFNL2Q8IZJ0 200 aa13.76□□□□□ -0.21
CHFR-220ENST00000541817 TAF1DQ9H5J8 278 aaPredicted RBP13.76□□□□□ -0.21
CHFR-220ENST00000541817 ABT1Q9ULW3 272 aaKnown RBP13.76□□□□□ -0.21
CHFR-220ENST00000541817 FMR1Q06787 632 aaKnown RBP eCLIP13.75□□□□□ -0.21
CHFR-220ENST00000541817 NFIXQ14938 502 aa13.75□□□□□ -0.21
CHFR-220ENST00000541817 PAXIP1Q6ZW49 1069 aaPredicted RBP13.75□□□□□ -0.21
CHFR-220ENST00000541817 ZNF622Q969S3 477 aaKnown RBP eCLIP13.75□□□□□ -0.219e-9■■□□□ 12.7
CHFR-220ENST00000541817 EMILIN1Q9Y6C2 1016 aa13.75□□□□□ -0.21
CHFR-220ENST00000541817 CASP8AP2Q9UKL3 1982 aa13.74□□□□□ -0.21
CHFR-220ENST00000541817 CARMIL3Q8ND23 1372 aa13.74□□□□□ -0.21
CHFR-220ENST00000541817 PPM1GO15355 546 aaPredicted RBP13.74□□□□□ -0.21
CHFR-220ENST00000541817 MAP1SQ66K74 1059 aaPredicted RBP13.74□□□□□ -0.21
CHFR-220ENST00000541817 CCDC24Q8N4L8 307 aa13.74□□□□□ -0.21
CHFR-220ENST00000541817 SIN3AQ96ST3 1273 aa13.74□□□□□ -0.21
CHFR-220ENST00000541817 FLT4P35916 1363 aa13.73□□□□□ -0.21
CHFR-220ENST00000541817 ZNF831Q5JPB2 1677 aa13.73□□□□□ -0.21
CHFR-220ENST00000541817 H0YIN7 160 aa13.73□□□□□ -0.21
CHFR-220ENST00000541817 ZPR1O75312 459 aa13.73□□□□□ -0.21
CHFR-220ENST00000541817 SERPINB2P05120 415 aa13.73□□□□□ -0.21
CHFR-220ENST00000541817 CYP4F22Q6NT55 531 aa13.73□□□□□ -0.21
CHFR-220ENST00000541817 FER1L6Q2WGJ9 1857 aa13.73□□□□□ -0.21
CHFR-220ENST00000541817 SOX10P56693 466 aa13.72□□□□□ -0.21
CHFR-220ENST00000541817 INTS5Q6P9B9 1019 aaKnown RBP13.72□□□□□ -0.21
CHFR-220ENST00000541817 CAPNS2Q96L46 248 aa13.72□□□□□ -0.21
CHFR-220ENST00000541817 EYA1Q99502 592 aa13.72□□□□□ -0.21
CHFR-220ENST00000541817 BEGAINQ9BUH8 593 aa13.72□□□□□ -0.21
CHFR-220ENST00000541817 ADAMTS7Q9UKP4 1686 aa13.72□□□□□ -0.21
CHFR-220ENST00000541817 NEUROD1Q13562 356 aa13.71□□□□□ -0.21
CHFR-220ENST00000541817 DGKZQ13574 1117 aa13.71□□□□□ -0.21
CHFR-220ENST00000541817 CNTROBQ8N137 903 aa13.71□□□□□ -0.21
CHFR-220ENST00000541817 CARD11Q9BXL7 1154 aa13.71□□□□□ -0.21
CHFR-220ENST00000541817 NRXN2Q9P2S2 1712 aa13.7□□□□□ -0.22
CHFR-220ENST00000541817 CACNA1SQ13698 1873 aa13.7□□□□□ -0.22
CHFR-220ENST00000541817 IQCA1LA6NCM1 817 aa13.7□□□□□ -0.22
CHFR-220ENST00000541817 AOC2O75106 756 aa13.7□□□□□ -0.22
CHFR-220ENST00000541817 BICDL1Q6ZP65 573 aa13.7□□□□□ -0.22
CHFR-220ENST00000541817 GPR101Q96P66 508 aaPredicted RBP13.7□□□□□ -0.22
CHFR-220ENST00000541817 TJP1Q07157 1748 aa13.7□□□□□ -0.22
CHFR-220ENST00000541817 SCN4AP35499 1836 aa13.69□□□□□ -0.22
CHFR-220ENST00000541817 ERVV-2B6SEH9 535 aa13.69□□□□□ -0.22
CHFR-220ENST00000541817 CABP4P57796 275 aa13.69□□□□□ -0.22
CHFR-220ENST00000541817 BCL2L12Q9HB09 334 aa13.69□□□□□ -0.22
CHFR-220ENST00000541817 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP13.69□□□□□ -0.22
CHFR-220ENST00000541817 NCAPD2Q15021 1401 aa13.69□□□□□ -0.22
CHFR-220ENST00000541817 ZNF541Q9H0D2 1346 aa13.68□□□□□ -0.22
CHFR-220ENST00000541817 ANKRD31Q8N7Z5 1873 aa13.68□□□□□ -0.22
CHFR-220ENST00000541817 ZEB1P37275 1124 aaPredicted RBP13.68□□□□□ -0.22
CHFR-220ENST00000541817 TAOK3Q9H2K8 898 aa13.68□□□□□ -0.22
CHFR-220ENST00000541817 TONSLQ96HA7 1378 aa13.68□□□□□ -0.22
CHFR-220ENST00000541817 PDE4DIPQ5VU43 2346 aa13.68□□□□□ -0.22
CHFR-220ENST00000541817 LTBP1Q14766 1721 aa13.67□□□□□ -0.22
CHFR-220ENST00000541817 EPHX2P34913 555 aa13.67□□□□□ -0.22
CHFR-220ENST00000541817 DNAJC10Q8IXB1 793 aa13.67□□□□□ -0.22
CHFR-220ENST00000541817 HACL1Q9UJ83 578 aa13.67□□□□□ -0.22
CHFR-220ENST00000541817 COL11A2P13942 1736 aaPredicted RBP13.67□□□□□ -0.22
CHFR-220ENST00000541817 SLX4Q8IY92 1834 aa13.67□□□□□ -0.22
CHFR-220ENST00000541817 RNF123Q5XPI4 1314 aa13.66□□□□□ -0.22
CHFR-220ENST00000541817 ADAMTSL1Q8N6G6 1762 aa13.66□□□□□ -0.22
CHFR-220ENST00000541817 L3MBTL3Q96JM7 780 aaPredicted RBP13.66□□□□□ -0.22
CHFR-220ENST00000541817 DDX21Q9NR30 783 aaKnown RBP eCLIP13.66□□□□□ -0.22
CHFR-220ENST00000541817 SOS1Q07889 1333 aaPredicted RBP13.65□□□□□ -0.22
CHFR-220ENST00000541817 THSD7BQ9C0I4 1608 aa13.65□□□□□ -0.22
CHFR-220ENST00000541817 KIF20BQ96Q89 1820 aa13.65□□□□□ -0.22
CHFR-220ENST00000541817 PRPF38BQ5VTL8 546 aaKnown RBP13.65□□□□□ -0.22
CHFR-220ENST00000541817 NFATC2IPQ8NCF5 419 aa13.65□□□□□ -0.22
CHFR-220ENST00000541817 NARFQ9UHQ1 456 aa13.65□□□□□ -0.22
CHFR-220ENST00000541817 ECE1P42892 770 aa13.64□□□□□ -0.23
CHFR-220ENST00000541817 PUS7Q96PZ0 661 aaKnown RBP13.64□□□□□ -0.23
CHFR-220ENST00000541817 LTBP3Q9NS15 1303 aa13.64□□□□□ -0.23
CHFR-220ENST00000541817 TRAF5O00463 557 aa13.63□□□□□ -0.23
CHFR-220ENST00000541817 KIF24Q5T7B8 1368 aa13.62□□□□□ -0.23
CHFR-220ENST00000541817 CST9Q5W186 159 aa13.62□□□□□ -0.23
CHFR-220ENST00000541817 ZNF530Q6P9A1 599 aaPredicted RBP13.62□□□□□ -0.23
CHFR-220ENST00000541817 ZNF277Q9NRM2 450 aaPredicted RBP13.62□□□□□ -0.23
CHFR-220ENST00000541817 ZBTB1Q9Y2K1 713 aa13.62□□□□□ -0.23
CHFR-220ENST00000541817 COL15A1P39059 1388 aa13.61□□□□□ -0.23
CHFR-220ENST00000541817 ST20-MTHFSA0A0A6YYL1 179 aa13.61□□□□□ -0.23
CHFR-220ENST00000541817 MTHFSP49914 203 aa13.61□□□□□ -0.23
CHFR-220ENST00000541817 TBC1D9BQ66K14 1250 aa13.61□□□□□ -0.23
CHFR-220ENST00000541817 PRPF40BQ6NWY9 871 aaKnown RBP13.61□□□□□ -0.23
CHFR-220ENST00000541817 OLFM4Q6UX06 510 aa13.61□□□□□ -0.23
CHFR-220ENST00000541817 WASHC2AQ641Q2 1341 aa13.61□□□□□ -0.23
CHFR-220ENST00000541817 HSP90AB1P08238 724 aaKnown RBP13.6□□□□□ -0.23
CHFR-220ENST00000541817 CYP19A1P11511 503 aaPredicted RBP13.6□□□□□ -0.23
CHFR-220ENST00000541817 PDE6BP35913 854 aa13.6□□□□□ -0.23
CHFR-220ENST00000541817 PNMA8AQ86V59 439 aaPredicted RBP13.6□□□□□ -0.23
CHFR-220ENST00000541817 TESK2Q96S53 571 aa13.6□□□□□ -0.23
CHFR-220ENST00000541817 CANXP27824 592 aaKnown RBP13.59□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 47.3 ms