RNA–Protein interactions for RNA: ENST00000541513.2

DDB1-219, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 4

Gene DDB1, Length 958 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-219ENST00000541513 GCGRP47871 477 aa7.35□□□□□ -1.23
DDB1-219ENST00000541513 CLDN10P78369 228 aa7.35□□□□□ -1.23
DDB1-219ENST00000541513 DSC3Q14574 896 aa7.35□□□□□ -1.23
DDB1-219ENST00000541513 PLEKHG4Q58EX7 1191 aa7.35□□□□□ -1.23
DDB1-219ENST00000541513 PHTF2Q8N3S3 785 aa7.35□□□□□ -1.23
DDB1-219ENST00000541513 CDCA7LQ96GN5 454 aa7.35□□□□□ -1.23
DDB1-219ENST00000541513 PLCD4Q9BRC7 762 aa7.35□□□□□ -1.23
DDB1-219ENST00000541513 PRKD2Q9BZL6 878 aa7.35□□□□□ -1.23
DDB1-219ENST00000541513 MAF1Q9H063 256 aa7.35□□□□□ -1.23
DDB1-219ENST00000541513 LDHBP07195 334 aaKnown RBP7.34□□□□□ -1.23
DDB1-219ENST00000541513 SERINC3Q13530 473 aa7.34□□□□□ -1.23
DDB1-219ENST00000541513 MAP7D1Q3KQU3 841 aa7.34□□□□□ -1.23
DDB1-219ENST00000541513 LONRF3Q496Y0 759 aa7.34□□□□□ -1.23
DDB1-219ENST00000541513 PLPP7Q8NBV4 271 aa7.34□□□□□ -1.23
DDB1-219ENST00000541513 FAM161BQ96MY7 647 aa7.34□□□□□ -1.23
DDB1-219ENST00000541513 CITED4Q96RK1 184 aa7.34□□□□□ -1.23
DDB1-219ENST00000541513 DUSP9Q99956 384 aaKnown RBP7.34□□□□□ -1.23
DDB1-219ENST00000541513 DNAAF2Q9NVR5 837 aaKnown RBP7.34□□□□□ -1.23
DDB1-219ENST00000541513 VTI1BQ9UEU0 232 aa7.34□□□□□ -1.23
DDB1-219ENST00000541513 INPP5FQ9Y2H2 1132 aa7.34□□□□□ -1.23
DDB1-219ENST00000541513 PDE3BQ13370 1112 aa7.33□□□□□ -1.24
DDB1-219ENST00000541513 EML3Q32P44 896 aa7.33□□□□□ -1.24
DDB1-219ENST00000541513 TSHZ1Q6ZSZ6 1077 aa7.33□□□□□ -1.24
DDB1-219ENST00000541513 ZNF654Q8IZM8 581 aa7.33□□□□□ -1.24
DDB1-219ENST00000541513 TMTC2Q8N394 836 aa7.33□□□□□ -1.24
DDB1-219ENST00000541513 SEPT3Q9UH03 358 aa7.33□□□□□ -1.24
DDB1-219ENST00000541513 DDX41Q9UJV9 622 aaKnown RBP7.33□□□□□ -1.24
DDB1-219ENST00000541513 PTCD1O75127 700 aaKnown RBP7.32□□□□□ -1.24
DDB1-219ENST00000541513 SEC13P55735 322 aa7.32□□□□□ -1.24
DDB1-219ENST00000541513 RHBDL3P58872 404 aa7.32□□□□□ -1.24
DDB1-219ENST00000541513 PSMD2Q13200 908 aa7.32□□□□□ -1.24
DDB1-219ENST00000541513 SLFNL1Q499Z3 407 aa7.32□□□□□ -1.24
DDB1-219ENST00000541513 VPS37DQ86XT2 251 aa7.32□□□□□ -1.24
DDB1-219ENST00000541513 RELTQ969Z4 430 aa7.32□□□□□ -1.24
DDB1-219ENST00000541513 COL26A1Q96A83 441 aa7.32□□□□□ -1.24
DDB1-219ENST00000541513 ZNF594Q96JF6 807 aaPredicted RBP7.32□□□□□ -1.24
DDB1-219ENST00000541513 PRIMPOLQ96LW4 560 aa7.32□□□□□ -1.24
DDB1-219ENST00000541513 FRMD6Q96NE9 622 aa7.32□□□□□ -1.24
DDB1-219ENST00000541513 ARHGAP35Q9NRY4 1499 aa7.31□□□□□ -1.24
DDB1-219ENST00000541513 K7ELQ4 463 aaPredicted RBP7.31□□□□□ -1.24
DDB1-219ENST00000541513 PDGFRBP09619 1106 aa7.31□□□□□ -1.24
DDB1-219ENST00000541513 PTPRGP23470 1445 aa7.31□□□□□ -1.24
DDB1-219ENST00000541513 GUCA2AQ02747 115 aa7.31□□□□□ -1.24
DDB1-219ENST00000541513 TRAF7Q6Q0C0 670 aa7.31□□□□□ -1.24
DDB1-219ENST00000541513 RDH13Q8NBN7 331 aa7.31□□□□□ -1.24
DDB1-219ENST00000541513 HELQQ8TDG4 1101 aa7.31□□□□□ -1.24
DDB1-219ENST00000541513 IRX2Q9BZI1 471 aaPredicted RBP7.31□□□□□ -1.24
DDB1-219ENST00000541513 CEP126Q9P2H0 1117 aa7.31□□□□□ -1.24
DDB1-219ENST00000541513 FAM198AQ9UFP1 575 aa7.31□□□□□ -1.24
DDB1-219ENST00000541513 PRR12Q9ULL5 1215 aa7.31□□□□□ -1.24
DDB1-219ENST00000541513 AXIN2Q9Y2T1 843 aa7.31□□□□□ -1.24
DDB1-219ENST00000541513 EMILIN1Q9Y6C2 1016 aa7.31□□□□□ -1.24
DDB1-219ENST00000541513 PPP1R12AO14974 1030 aaPredicted RBP7.3□□□□□ -1.24
DDB1-219ENST00000541513 PER1O15534 1290 aaPredicted RBP7.3□□□□□ -1.24
DDB1-219ENST00000541513 PRC1O43663 620 aa7.3□□□□□ -1.24
DDB1-219ENST00000541513 NDUFB5O43674 189 aa7.3□□□□□ -1.24
DDB1-219ENST00000541513 FAM13AO94988 1023 aa7.3□□□□□ -1.24
DDB1-219ENST00000541513 GJA8P48165 433 aa7.3□□□□□ -1.24
DDB1-219ENST00000541513 AMPD3Q01432 767 aa7.3□□□□□ -1.24
DDB1-219ENST00000541513 KCNH2Q12809 1159 aa7.3□□□□□ -1.24
DDB1-219ENST00000541513 PNISRQ8TF01 805 aaKnown RBP7.3□□□□□ -1.24
DDB1-219ENST00000541513 CCDC136Q96JN2 1154 aa7.3□□□□□ -1.24
DDB1-219ENST00000541513 C8orf48Q96LL4 319 aa7.3□□□□□ -1.24
DDB1-219ENST00000541513 DMRTB1Q96MA1 342 aa7.3□□□□□ -1.24
DDB1-219ENST00000541513 CYLDQ9NQC7 956 aa7.3□□□□□ -1.24
DDB1-219ENST00000541513 G3BP2Q9UN86 482 aaKnown RBP7.3□□□□□ -1.24
DDB1-219ENST00000541513 ADCY10Q96PN6 1610 aa7.3□□□□□ -1.24
DDB1-219ENST00000541513 UHRF1BP1LA0JNW5 1464 aa7.3□□□□□ -1.24
DDB1-219ENST00000541513 CLIP1P30622 1438 aa7.29□□□□□ -1.24
DDB1-219ENST00000541513 ABCC2Q92887 1545 aa7.29□□□□□ -1.24
DDB1-219ENST00000541513 ZBTB7BO15156 539 aaPredicted RBP7.29□□□□□ -1.24
DDB1-219ENST00000541513 SH3BP5O60239 455 aa7.29□□□□□ -1.24
DDB1-219ENST00000541513 IGHA2P01877 340 aa7.29□□□□□ -1.24
DDB1-219ENST00000541513 RACK1P63244 317 aaKnown RBP7.29□□□□□ -1.24
DDB1-219ENST00000541513 BIRC2Q13490 618 aa7.29□□□□□ -1.24
DDB1-219ENST00000541513 MTMR3Q13615 1198 aa7.29□□□□□ -1.24
DDB1-219ENST00000541513 FAM50AQ14320 339 aaKnown RBP7.29□□□□□ -1.24
DDB1-219ENST00000541513 DESI1Q6ICB0 168 aa7.29□□□□□ -1.24
DDB1-219ENST00000541513 CYB5RLQ6IPT4 315 aa7.29□□□□□ -1.24
DDB1-219ENST00000541513 CCSAPQ6IQ19 270 aaPredicted RBP7.29□□□□□ -1.24
DDB1-219ENST00000541513 CLEC4GQ6UXB4 293 aa7.29□□□□□ -1.24
DDB1-219ENST00000541513 FMNL3Q8IVF7 1028 aa7.29□□□□□ -1.24
DDB1-219ENST00000541513 HLA-CQ95604 372 aa7.29□□□□□ -1.24
DDB1-219ENST00000541513 NOD1Q9Y239 953 aa7.29□□□□□ -1.24
DDB1-219ENST00000541513 ABCA8O94911 1581 aa7.29□□□□□ -1.24
DDB1-219ENST00000541513 FHOD3Q2V2M9 1422 aa7.28□□□□□ -1.24
DDB1-219ENST00000541513 CEP162Q5TB80 1403 aa7.28□□□□□ -1.24
DDB1-219ENST00000541513 RAPGEF6Q8TEU7 1601 aa7.28□□□□□ -1.24
DDB1-219ENST00000541513 A0A0U1RQG5 324 aaPredicted RBP7.28□□□□□ -1.24
DDB1-219ENST00000541513 C6orf229H3BNL8 230 aa7.28□□□□□ -1.24
DDB1-219ENST00000541513 VIL1P09327 827 aaKnown RBP7.28□□□□□ -1.24
DDB1-219ENST00000541513 PTMSP20962 102 aa7.28□□□□□ -1.24
DDB1-219ENST00000541513 PAX3P23760 479 aa7.28□□□□□ -1.24
DDB1-219ENST00000541513 PLCB3Q01970 1234 aa7.28□□□□□ -1.24
DDB1-219ENST00000541513 PTPN12Q05209 780 aaKnown RBP7.28□□□□□ -1.24
DDB1-219ENST00000541513 EHHADHQ08426 723 aa7.28□□□□□ -1.24
DDB1-219ENST00000541513 ZFYVE27Q5T4F4 411 aa7.28□□□□□ -1.24
DDB1-219ENST00000541513 CKAP2LQ8IYA6 745 aa7.28□□□□□ -1.24
DDB1-219ENST00000541513 ALKBH8Q96BT7 664 aaKnown RBP7.28□□□□□ -1.24
DDB1-219ENST00000541513 CRELD1Q96HD1 420 aa7.28□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 47.2 ms