RNA–Protein interactions for RNA: ENST00000540998.5

CDC42SE1-207, Transcript of CDC42 small effector 1, humanhuman

APPRIS P1 TSL 2 BASIC

Gene CDC42SE1, Length 3,181 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE1-207ENST00000540998 MON2Q7Z3U7 1717 aa12.52□□□□□ -0.41
CDC42SE1-207ENST00000540998 KCNQ3O43525 872 aa12.52□□□□□ -0.41
CDC42SE1-207ENST00000540998 ADCY5O95622 1261 aa12.52□□□□□ -0.41
CDC42SE1-207ENST00000540998 ADCK5Q3MIX3 580 aa12.52□□□□□ -0.41
CDC42SE1-207ENST00000540998 CCDC83Q8IWF9 413 aa12.52□□□□□ -0.41
CDC42SE1-207ENST00000540998 NECAB1Q8N987 351 aa12.52□□□□□ -0.41
CDC42SE1-207ENST00000540998 SPC24Q8NBT2 197 aa12.52□□□□□ -0.41
CDC42SE1-207ENST00000540998 SRGAP3O43295 1099 aa12.51□□□□□ -0.41
CDC42SE1-207ENST00000540998 SYT1P21579 422 aa12.51□□□□□ -0.41
CDC42SE1-207ENST00000540998 HS1BP3Q53T59 392 aa12.51□□□□□ -0.41
CDC42SE1-207ENST00000540998 FERMT3Q86UX7 667 aa12.51□□□□□ -0.41
CDC42SE1-207ENST00000540998 C14orf37Q86TY3 774 aa12.51□□□□□ -0.41
CDC42SE1-207ENST00000540998 RBM33Q96EV2 1170 aaKnown RBP12.51□□□□□ -0.41
CDC42SE1-207ENST00000540998 SETD1BQ9UPS6 1966 aaKnown RBP12.51□□□□□ -0.41
CDC42SE1-207ENST00000540998 OVOS2A0A0J9YW53 1432 aa12.51□□□□□ -0.41
CDC42SE1-207ENST00000540998 OVOS2Q6IE36 1432 aa12.51□□□□□ -0.41
CDC42SE1-207ENST00000540998 PTH1RQ03431 593 aa12.51□□□□□ -0.41
CDC42SE1-207ENST00000540998 DNM1Q05193 864 aaKnown RBP12.51□□□□□ -0.41
CDC42SE1-207ENST00000540998 CASTP20810 708 aaKnown RBP12.5□□□□□ -0.41
CDC42SE1-207ENST00000540998 LTKP29376 864 aa12.5□□□□□ -0.41
CDC42SE1-207ENST00000540998 HSPA4P34932 840 aa12.5□□□□□ -0.41
CDC42SE1-207ENST00000540998 PI4K2BQ8TCG2 481 aa12.5□□□□□ -0.41
CDC42SE1-207ENST00000540998 PA2G4Q9UQ80 394 aaKnown RBP12.5□□□□□ -0.41
CDC42SE1-207ENST00000540998 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP12.5□□□□□ -0.41
CDC42SE1-207ENST00000540998 GNAI3P08754 354 aa12.5□□□□□ -0.41
CDC42SE1-207ENST00000540998 HAP1P54257 671 aaPredicted RBP12.5□□□□□ -0.41
CDC42SE1-207ENST00000540998 KIAA2012Q0VF49 1180 aa12.5□□□□□ -0.41
CDC42SE1-207ENST00000540998 HDGFL1Q5TGJ6 251 aa12.5□□□□□ -0.41
CDC42SE1-207ENST00000540998 NGDNQ8NEJ9 315 aaKnown RBP12.5□□□□□ -0.41
CDC42SE1-207ENST00000540998 ITSN1Q15811 1721 aa12.5□□□□□ -0.41
CDC42SE1-207ENST00000540998 VPS37CA5D8V6 355 aaPredicted RBP12.49□□□□□ -0.41
CDC42SE1-207ENST00000540998 CEBPAP49715 358 aaPredicted RBP12.49□□□□□ -0.41
CDC42SE1-207ENST00000540998 CCDC30Q5VVM6 783 aa12.49□□□□□ -0.41
CDC42SE1-207ENST00000540998 RHPN1Q8TCX5 695 aa12.49□□□□□ -0.41
CDC42SE1-207ENST00000540998 WDR33Q9C0J8 1336 aaKnown RBP12.49□□□□□ -0.41
CDC42SE1-207ENST00000540998 SASS6Q6UVJ0 657 aa12.49□□□□□ -0.41
CDC42SE1-207ENST00000540998 USP6P35125 1406 aa12.49□□□□□ -0.41
CDC42SE1-207ENST00000540998 NLRP6P59044 892 aa12.49□□□□□ -0.41
CDC42SE1-207ENST00000540998 CAMK4Q16566 473 aa12.49□□□□□ -0.41
CDC42SE1-207ENST00000540998 TAF6LQ9Y6J9 622 aa12.49□□□□□ -0.41
CDC42SE1-207ENST00000540998 NRKQ7Z2Y5 1582 aa12.48□□□□□ -0.41
CDC42SE1-207ENST00000540998 STX6O43752 255 aa12.48□□□□□ -0.41
CDC42SE1-207ENST00000540998 PRPF40BQ6NWY9 871 aaKnown RBP12.48□□□□□ -0.41
CDC42SE1-207ENST00000540998 INTS4Q96HW7 963 aaKnown RBP12.48□□□□□ -0.41
CDC42SE1-207ENST00000540998 LSG1Q9H089 658 aaKnown RBP12.48□□□□□ -0.41
CDC42SE1-207ENST00000540998 TUBGCP6Q96RT7 1819 aa12.48□□□□□ -0.41
CDC42SE1-207ENST00000540998 AKAP12Q02952 1782 aa12.48□□□□□ -0.41
CDC42SE1-207ENST00000540998 SGSM2O43147 1006 aa12.48□□□□□ -0.41
CDC42SE1-207ENST00000540998 ZSCAN22P10073 491 aaPredicted RBP12.48□□□□□ -0.41
CDC42SE1-207ENST00000540998 MCM2P49736 904 aa12.48□□□□□ -0.41
CDC42SE1-207ENST00000540998 OS9Q13438 667 aaPredicted RBP12.48□□□□□ -0.41
CDC42SE1-207ENST00000540998 TAF7Q15545 349 aaPredicted RBP12.48□□□□□ -0.41
CDC42SE1-207ENST00000540998 ESF1Q9H501 851 aaKnown RBP12.48□□□□□ -0.41
CDC42SE1-207ENST00000540998 LGR6Q9HBX8 967 aa12.48□□□□□ -0.41
CDC42SE1-207ENST00000540998 CHPF2Q9P2E5 772 aa12.48□□□□□ -0.41
CDC42SE1-207ENST00000540998 STAP2Q9UGK3 403 aa12.48□□□□□ -0.41
CDC42SE1-207ENST00000540998 TTC14Q96N46 770 aa12.47□□□□□ -0.41
CDC42SE1-207ENST00000540998 PYCARDQ9ULZ3 195 aa12.47□□□□□ -0.41
CDC42SE1-207ENST00000540998 SIPA1L2Q9P2F8 1722 aaPredicted RBP12.47□□□□□ -0.41
CDC42SE1-207ENST00000540998 RAD50Q92878 1312 aa12.47□□□□□ -0.41
CDC42SE1-207ENST00000540998 PI4KAP2A4QPH2 592 aa12.47□□□□□ -0.41
CDC42SE1-207ENST00000540998 GNAT3A8MTJ3 354 aa12.47□□□□□ -0.41
CDC42SE1-207ENST00000540998 GJB2P29033 226 aa12.47□□□□□ -0.41
CDC42SE1-207ENST00000540998 ST3GAL1Q11201 340 aa12.47□□□□□ -0.41
CDC42SE1-207ENST00000540998 ZNF710Q8N1W2 664 aa12.47□□□□□ -0.41
CDC42SE1-207ENST00000540998 PI4KAP1Q8N8J0 262 aa12.47□□□□□ -0.41
CDC42SE1-207ENST00000540998 JAKMIP1Q96N16 626 aaKnown RBP12.47□□□□□ -0.41
CDC42SE1-207ENST00000540998 ANAPC15P60006 121 aa12.46□□□□□ -0.41
CDC42SE1-207ENST00000540998 NOLC1Q14978 699 aaKnown RBP eCLIP12.46□□□□□ -0.41
CDC42SE1-207ENST00000540998 SYAP1Q96A49 352 aaPredicted RBP12.46□□□□□ -0.41
CDC42SE1-207ENST00000540998 SMC3Q9UQE7 1217 aa12.46□□□□□ -0.41
CDC42SE1-207ENST00000540998 PRAMEF22A3QJZ6 481 aa12.46□□□□□ -0.42
CDC42SE1-207ENST00000540998 PPFIA3O75145 1194 aa12.46□□□□□ -0.42
CDC42SE1-207ENST00000540998 F13A1P00488 732 aa12.46□□□□□ -0.42
CDC42SE1-207ENST00000540998 CCDC183Q5T5S1 534 aa12.46□□□□□ -0.42
CDC42SE1-207ENST00000540998 ZHX1Q9UKY1 873 aaPredicted RBP12.46□□□□□ -0.42
CDC42SE1-207ENST00000540998 CHGBP05060 677 aa12.45□□□□□ -0.42
CDC42SE1-207ENST00000540998 CSPP1Q1MSJ5 1256 aa12.45□□□□□ -0.42
CDC42SE1-207ENST00000540998 SSH3Q8TE77 659 aa12.45□□□□□ -0.42
CDC42SE1-207ENST00000540998 KCNF1Q9H3M0 494 aa12.45□□□□□ -0.42
CDC42SE1-207ENST00000540998 IGSF1Q8N6C5 1336 aa12.45□□□□□ -0.42
CDC42SE1-207ENST00000540998 CKAP2LQ8IYA6 745 aa12.44□□□□□ -0.42
CDC42SE1-207ENST00000540998 FAM227BQ96M60 508 aa12.44□□□□□ -0.42
CDC42SE1-207ENST00000540998 RGPD1P0DJD0 1748 aa12.44□□□□□ -0.42
CDC42SE1-207ENST00000540998 ARHGEF10O15013 1369 aa12.44□□□□□ -0.42
CDC42SE1-207ENST00000540998 FLT4P35916 1363 aa12.44□□□□□ -0.42
CDC42SE1-207ENST00000540998 STK3Q13188 491 aa12.44□□□□□ -0.42
CDC42SE1-207ENST00000540998 TFIP11Q9UBB9 837 aaKnown RBP12.44□□□□□ -0.42
CDC42SE1-207ENST00000540998 LIMCH1Q9UPQ0 1083 aa12.44□□□□□ -0.42
CDC42SE1-207ENST00000540998 NDUFB9Q9Y6M9 179 aa12.44□□□□□ -0.42
CDC42SE1-207ENST00000540998 XRN1Q8IZH2 1706 aaKnown RBP12.44□□□□□ -0.42
CDC42SE1-207ENST00000540998 DYNC1I1O14576 645 aa12.44□□□□□ -0.42
CDC42SE1-207ENST00000540998 CBX1P83916 185 aa12.44□□□□□ -0.42
CDC42SE1-207ENST00000540998 ME3Q16798 604 aa12.44□□□□□ -0.42
CDC42SE1-207ENST00000540998 PROSER3Q2NL68 480 aa12.44□□□□□ -0.42
CDC42SE1-207ENST00000540998 CWF19L2Q2TBE0 894 aaKnown RBP12.44□□□□□ -0.42
CDC42SE1-207ENST00000540998 KLHDC4Q8TBB5 520 aa12.44□□□□□ -0.42
CDC42SE1-207ENST00000540998 HYPKQ9NX55 129 aa12.44□□□□□ -0.42
CDC42SE1-207ENST00000540998 MTMR6Q9Y217 621 aa12.44□□□□□ -0.42
CDC42SE1-207ENST00000540998 PLEKHG3A1L390 1219 aa12.43□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms