RNA–Protein interactions for RNA: ENST00000540846.6

SMAD3-204, Transcript of SMAD family member 3, humanhuman

TSL 1 (best) BASIC

Gene SMAD3, Length 1,567 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-204ENST00000540846 RREB1Q92766 1687 aa15.93■□□□□ 0.14
SMAD3-204ENST00000540846 TAF1LQ8IZX4 1826 aa15.93■□□□□ 0.14
SMAD3-204ENST00000540846 RLBP1P12271 317 aa15.92■□□□□ 0.14
SMAD3-204ENST00000540846 TTC5Q8N0Z6 440 aa15.92■□□□□ 0.14
SMAD3-204ENST00000540846 RGPD3A6NKT7 1758 aaPredicted RBP15.92■□□□□ 0.14
SMAD3-204ENST00000540846 RGPD4Q7Z3J3 1758 aa15.92■□□□□ 0.14
SMAD3-204ENST00000540846 FMNL2Q96PY5 1086 aa15.92■□□□□ 0.14
SMAD3-204ENST00000540846 COG6Q9Y2V7 657 aa15.92■□□□□ 0.14
SMAD3-204ENST00000540846 PALLDQ8WX93 1383 aa15.91■□□□□ 0.14
SMAD3-204ENST00000540846 BCL11BQ9C0K0 894 aaPredicted RBP15.91■□□□□ 0.14
SMAD3-204ENST00000540846 TNNQ9UQP3 1299 aa15.91■□□□□ 0.14
SMAD3-204ENST00000540846 PTCD1O75127 700 aaKnown RBP15.9■□□□□ 0.14
SMAD3-204ENST00000540846 ATF7IPQ6VMQ6 1270 aa15.9■□□□□ 0.14
SMAD3-204ENST00000540846 CENPQQ7L2Z9 268 aaPredicted RBP15.9■□□□□ 0.14
SMAD3-204ENST00000540846 DZIP1LQ8IYY4 767 aaKnown RBP15.9■□□□□ 0.14
SMAD3-204ENST00000540846 CLUAP1Q96AJ1 413 aa15.9■□□□□ 0.14
SMAD3-204ENST00000540846 TRIM27P14373 513 aa15.89■□□□□ 0.13
SMAD3-204ENST00000540846 VSIG10Q8N0Z9 540 aa15.89■□□□□ 0.13
SMAD3-204ENST00000540846 MYH14Q7Z406 1995 aaKnown RBP15.89■□□□□ 0.13
SMAD3-204ENST00000540846 IPO8O15397 1037 aaKnown RBP15.88■□□□□ 0.13
SMAD3-204ENST00000540846 SNRPA1P09661 255 aaKnown RBP15.88■□□□□ 0.13
SMAD3-204ENST00000540846 MVPQ14764 893 aaKnown RBP15.88■□□□□ 0.13
SMAD3-204ENST00000540846 TRIM37O94972 964 aa15.87■□□□□ 0.13
SMAD3-204ENST00000540846 FTSJ3Q8IY81 847 aaKnown RBP15.87■□□□□ 0.13
SMAD3-204ENST00000540846 SMARCC1Q92922 1105 aaPredicted RBP15.87■□□□□ 0.13
SMAD3-204ENST00000540846 NOB1Q9ULX3 412 aaKnown RBP15.87■□□□□ 0.13
SMAD3-204ENST00000540846 USP16Q9Y5T5 823 aa15.87■□□□□ 0.13
SMAD3-204ENST00000540846 TCERG1O14776 1098 aaKnown RBP15.87■□□□□ 0.13
SMAD3-204ENST00000540846 HDGFL1Q5TGJ6 251 aa15.87■□□□□ 0.13
SMAD3-204ENST00000540846 MRPL50Q8N5N7 158 aaKnown RBP15.87■□□□□ 0.13
SMAD3-204ENST00000540846 LOC102724428A0A0B4J2F2 783 aa15.86■□□□□ 0.13
SMAD3-204ENST00000540846 SIK1P57059 783 aa15.86■□□□□ 0.13
SMAD3-204ENST00000540846 PDIA6Q15084 440 aa15.86■□□□□ 0.13
SMAD3-204ENST00000540846 ARHGAP45Q92619 1136 aa15.86■□□□□ 0.13
SMAD3-204ENST00000540846 N4BP2Q86UW6 1770 aaPredicted RBP15.85■□□□□ 0.13
SMAD3-204ENST00000540846 ITPK1Q13572 414 aa15.85■□□□□ 0.13
SMAD3-204ENST00000540846 CCDC30Q5VVM6 783 aa15.85■□□□□ 0.13
SMAD3-204ENST00000540846 LRP10Q7Z4F1 713 aa15.85■□□□□ 0.13
SMAD3-204ENST00000540846 DNAJC10Q8IXB1 793 aa15.85■□□□□ 0.13
SMAD3-204ENST00000540846 RBM42Q9BTD8 480 aaKnown RBP15.85■□□□□ 0.13
SMAD3-204ENST00000540846 NECTIN2Q92692 538 aa15.84■□□□□ 0.13
SMAD3-204ENST00000540846 CHPF2Q9P2E5 772 aa15.84■□□□□ 0.13
SMAD3-204ENST00000540846 EIF2S2P20042 333 aaKnown RBP15.83■□□□□ 0.13
SMAD3-204ENST00000540846 PROSER3Q2NL68 480 aa15.83■□□□□ 0.13
SMAD3-204ENST00000540846 NBPF26B4DH59 902 aa15.83■□□□□ 0.12
SMAD3-204ENST00000540846 C4BP0C0L5 1744 aa15.83■□□□□ 0.12
SMAD3-204ENST00000540846 CYP19A1P11511 503 aaPredicted RBP15.83■□□□□ 0.12
SMAD3-204ENST00000540846 NBPF14Q5TI25 921 aa15.83■□□□□ 0.12
SMAD3-204ENST00000540846 NBPF10Q6P3W6 841 aaKnown RBP15.83■□□□□ 0.12
SMAD3-204ENST00000540846 G2E3Q7L622 706 aa15.83■□□□□ 0.12
SMAD3-204ENST00000540846 NBPF15Q8N660 670 aa15.83■□□□□ 0.12
SMAD3-204ENST00000540846 DDX19BQ9UMR2 479 aa15.83■□□□□ 0.12
SMAD3-204ENST00000540846 ABCC4O15439 1325 aa15.82■□□□□ 0.12
SMAD3-204ENST00000540846 ERBB4Q15303 1308 aa15.82■□□□□ 0.12
SMAD3-204ENST00000540846 NUP188Q5SRE5 1749 aa15.82■□□□□ 0.12
SMAD3-204ENST00000540846 SLC4A2P04920 1241 aa15.82■□□□□ 0.12
SMAD3-204ENST00000540846 TEX13AQ9BXU3 409 aaPredicted RBP15.82■□□□□ 0.12
SMAD3-204ENST00000540846 ANXA1P04083 346 aa15.81■□□□□ 0.12
SMAD3-204ENST00000540846 ATP6V1AP38606 617 aa15.81■□□□□ 0.12
SMAD3-204ENST00000540846 TMEM57Q8N5G2 664 aa15.81■□□□□ 0.12
SMAD3-204ENST00000540846 DDX21Q9NR30 783 aaKnown RBP eCLIP15.81■□□□□ 0.12
SMAD3-204ENST00000540846 DBF4Q9UBU7 674 aaPredicted RBP15.81■□□□□ 0.12
SMAD3-204ENST00000540846 ARFGEF2Q9Y6D5 1785 aa15.8■□□□□ 0.12
SMAD3-204ENST00000540846 A1BGP04217 495 aa15.8■□□□□ 0.12
SMAD3-204ENST00000540846 KCNQ4P56696 695 aa15.8■□□□□ 0.12
SMAD3-204ENST00000540846 STK31Q9BXU1 1019 aa15.8■□□□□ 0.12
SMAD3-204ENST00000540846 CHMP4AQ9BY43 222 aa15.8■□□□□ 0.12
SMAD3-204ENST00000540846 LRRC4BQ9NT99 713 aa15.8■□□□□ 0.12
SMAD3-204ENST00000540846 RBM19Q9Y4C8 960 aaKnown RBP15.8■□□□□ 0.12
SMAD3-204ENST00000540846 UBR3Q6ZT12 1888 aa15.8■□□□□ 0.12
SMAD3-204ENST00000540846 PLSCR1O15162 318 aa15.79■□□□□ 0.12
SMAD3-204ENST00000540846 PIP4K2AP48426 406 aaPredicted RBP15.79■□□□□ 0.12
SMAD3-204ENST00000540846 ITPRIPQ8IWB1 547 aa15.79■□□□□ 0.12
SMAD3-204ENST00000540846 PROM2Q8N271 834 aa15.79■□□□□ 0.12
SMAD3-204ENST00000540846 LINC00116Q8NCU8 138 aa15.79■□□□□ 0.12
SMAD3-204ENST00000540846 API5Q9BZZ5 524 aaKnown RBP15.79■□□□□ 0.12
SMAD3-204ENST00000540846 PHAXQ9H814 394 aaKnown RBP15.79■□□□□ 0.12
SMAD3-204ENST00000540846 PCDHB15Q9Y5E8 787 aa15.79■□□□□ 0.12
SMAD3-204ENST00000540846 IGHDP01880 384 aa15.79■□□□□ 0.12
SMAD3-204ENST00000540846 INTS5Q6P9B9 1019 aaKnown RBP15.79■□□□□ 0.12
SMAD3-204ENST00000540846 TUBGCP6Q96RT7 1819 aa15.78■□□□□ 0.12
SMAD3-204ENST00000540846 STARD3NLO95772 234 aa15.78■□□□□ 0.12
SMAD3-204ENST00000540846 FLIIQ13045 1269 aa15.78■□□□□ 0.12
SMAD3-204ENST00000540846 CCNL1Q9UK58 526 aaPredicted RBP15.78■□□□□ 0.12
SMAD3-204ENST00000540846 ZBTB1Q9Y2K1 713 aa15.78■□□□□ 0.12
SMAD3-204ENST00000540846 CNTNAP4Q9C0A0 1308 aa15.77■□□□□ 0.12
SMAD3-204ENST00000540846 C4AP0C0L4 1744 aa15.77■□□□□ 0.12
SMAD3-204ENST00000540846 BCORQ6W2J9 1755 aa15.77■□□□□ 0.12
SMAD3-204ENST00000540846 APBA3O96018 575 aa15.77■□□□□ 0.11
SMAD3-204ENST00000540846 CRKLP46109 303 aaKnown RBP15.77■□□□□ 0.11
SMAD3-204ENST00000540846 HYPKQ9NX55 129 aa15.77■□□□□ 0.11
SMAD3-204ENST00000540846 PTPRCP08575 1304 aa15.77■□□□□ 0.11
SMAD3-204ENST00000540846 ADCY9O60503 1353 aa15.76■□□□□ 0.11
SMAD3-204ENST00000540846 SLC27A3Q5K4L6 730 aa15.76■□□□□ 0.11
SMAD3-204ENST00000540846 ZBTB40Q9NUA8 1239 aa15.76■□□□□ 0.11
SMAD3-204ENST00000540846 CCDC87Q9NVE4 849 aa15.76■□□□□ 0.11
SMAD3-204ENST00000540846 MYL6BP14649 208 aa15.75■□□□□ 0.11
SMAD3-204ENST00000540846 TXNRD1Q16881 649 aa15.75■□□□□ 0.11
SMAD3-204ENST00000540846 CHMP4BQ9H444 224 aaKnown RBP15.75■□□□□ 0.11
SMAD3-204ENST00000540846 PXDNLA1KZ92 1463 aa15.75■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 70.8 ms