RNA–Protein interactions for RNA: ENST00000540805.5

PROM1-220, Transcript of prominin 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene PROM1, Length 3,908 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PROM1-220ENST00000540805 PRIM1P49642 420 aaKnown RBP6.34□□□□□ -1.39
PROM1-220ENST00000540805 STRN4Q9NRL3 753 aa6.34□□□□□ -1.39
PROM1-220ENST00000540805 MST1RQ04912 1400 aa6.34□□□□□ -1.39
PROM1-220ENST00000540805 U2AF2P26368 475 aaKnown RBP eCLIP6.34□□□□□ -1.396e-6■■■■□ 22.5
PROM1-220ENST00000540805 NLRP6P59044 892 aa6.34□□□□□ -1.39
PROM1-220ENST00000540805 RRS1Q15050 365 aaKnown RBP6.34□□□□□ -1.39
PROM1-220ENST00000540805 THEMISQ8N1K5 641 aaPredicted RBP6.34□□□□□ -1.39
PROM1-220ENST00000540805 SECISBP2LQ93073 1101 aaKnown RBP6.34□□□□□ -1.39
PROM1-220ENST00000540805 FCHSD2O94868 740 aa6.34□□□□□ -1.39
PROM1-220ENST00000540805 CYP2E1P05181 493 aaPredicted RBP6.34□□□□□ -1.39
PROM1-220ENST00000540805 NOL8Q76FK4 1167 aaKnown RBP6.34□□□□□ -1.39
PROM1-220ENST00000540805 CWC22Q9HCG8 908 aaKnown RBP6.34□□□□□ -1.39
PROM1-220ENST00000540805 KDRP35968 1356 aa6.34□□□□□ -1.39
PROM1-220ENST00000540805 SLIT3O75094 1523 aa6.34□□□□□ -1.4
PROM1-220ENST00000540805 N4BP2Q86UW6 1770 aaPredicted RBP6.34□□□□□ -1.4
PROM1-220ENST00000540805 TRIM6-TRIM34B2RNG4 842 aa6.33□□□□□ -1.4
PROM1-220ENST00000540805 DIAPH1O60610 1272 aaKnown RBP6.33□□□□□ -1.4
PROM1-220ENST00000540805 PRPF40AO75400 957 aaKnown RBP6.33□□□□□ -1.4
PROM1-220ENST00000540805 HMOX1P09601 288 aa6.33□□□□□ -1.4
PROM1-220ENST00000540805 C1orf141Q5JVX7 400 aa6.33□□□□□ -1.4
PROM1-220ENST00000540805 FOXD4L5Q5VV16 416 aaPredicted RBP6.33□□□□□ -1.4
PROM1-220ENST00000540805 LRSAM1Q6UWE0 723 aa6.33□□□□□ -1.4
PROM1-220ENST00000540805 FOXD4L4Q8WXT5 416 aaPredicted RBP6.33□□□□□ -1.4
PROM1-220ENST00000540805 ESCO1Q5FWF5 840 aa6.33□□□□□ -1.4
PROM1-220ENST00000540805 C1orf115Q9H7X2 142 aa6.33□□□□□ -1.4
PROM1-220ENST00000540805 ADAMTS7Q9UKP4 1686 aa6.33□□□□□ -1.4
PROM1-220ENST00000540805 PTMAP06454 111 aaKnown RBP6.33□□□□□ -1.4
PROM1-220ENST00000540805 DNTTIP2Q5QJE6 756 aaKnown RBP6.33□□□□□ -1.4
PROM1-220ENST00000540805 RGS17Q9UGC6 210 aaPredicted RBP6.33□□□□□ -1.4
PROM1-220ENST00000540805 NCAPD2Q15021 1401 aa6.33□□□□□ -1.4
PROM1-220ENST00000540805 ADGRL3Q9HAR2 1447 aa6.33□□□□□ -1.4
PROM1-220ENST00000540805 COL18A1P39060 1754 aa6.33□□□□□ -1.4
PROM1-220ENST00000540805 RGPD5Q99666 1765 aa6.33□□□□□ -1.4
PROM1-220ENST00000540805 GOLGA6L4A6NEF3 574 aa6.32□□□□□ -1.4
PROM1-220ENST00000540805 RAD21O60216 631 aa6.32□□□□□ -1.4
PROM1-220ENST00000540805 IRX5P78411 483 aaPredicted RBP6.32□□□□□ -1.4
PROM1-220ENST00000540805 PKP1Q13835 747 aa6.32□□□□□ -1.4
PROM1-220ENST00000540805 EIF4A2Q14240 407 aaKnown RBP6.32□□□□□ -1.4
PROM1-220ENST00000540805 SIPA1L3O60292 1781 aaPredicted RBP6.32□□□□□ -1.4
PROM1-220ENST00000540805 CRB1P82279 1406 aa6.32□□□□□ -1.4
PROM1-220ENST00000540805 ST18O60284 1047 aa6.32□□□□□ -1.4
PROM1-220ENST00000540805 GPT2Q8TD30 523 aa6.32□□□□□ -1.4
PROM1-220ENST00000540805 RGS12O14924 1447 aa6.32□□□□□ -1.4
PROM1-220ENST00000540805 NPHP4O75161 1426 aaPredicted RBP6.32□□□□□ -1.4
PROM1-220ENST00000540805 SYCE3A1L190 88 aa6.32□□□□□ -1.4
PROM1-220ENST00000540805 ZBTB7BO15156 539 aaPredicted RBP6.32□□□□□ -1.4
PROM1-220ENST00000540805 KIAA2012Q0VF49 1180 aa6.32□□□□□ -1.4
PROM1-220ENST00000540805 SAMD1Q6SPF0 538 aaPredicted RBP6.32□□□□□ -1.4
PROM1-220ENST00000540805 FAM208AQ9UK61 1670 aaKnown RBP6.32□□□□□ -1.4
PROM1-220ENST00000540805 MBD3O95983 291 aa6.31□□□□□ -1.4
PROM1-220ENST00000540805 UTP14CQ5TAP6 766 aaKnown RBP6.31□□□□□ -1.4
PROM1-220ENST00000540805 TTC5Q8N0Z6 440 aa6.31□□□□□ -1.4
PROM1-220ENST00000540805 GSPT1P15170 499 aaKnown RBP6.31□□□□□ -1.4
PROM1-220ENST00000540805 PRKAR2BP31323 418 aa6.31□□□□□ -1.4
PROM1-220ENST00000540805 BRPF1P55201 1214 aaPredicted RBP6.31□□□□□ -1.4
PROM1-220ENST00000540805 NAA30Q147X3 362 aaPredicted RBP6.31□□□□□ -1.4
PROM1-220ENST00000540805 INTS3Q68E01 1043 aaKnown RBP6.31□□□□□ -1.4
PROM1-220ENST00000540805 TMEM63CQ9P1W3 806 aa6.31□□□□□ -1.4
PROM1-220ENST00000540805 NSFL1CQ9UNZ2 370 aaKnown RBP6.31□□□□□ -1.4
PROM1-220ENST00000540805 GNL2Q13823 731 aaKnown RBP6.31□□□□□ -1.4
PROM1-220ENST00000540805 ZNF771Q7L3S4 317 aaPredicted RBP6.31□□□□□ -1.4
PROM1-220ENST00000540805 RAPGEF4Q8WZA2 1011 aa6.31□□□□□ -1.4
PROM1-220ENST00000540805 MAP3K19Q56UN5 1328 aa6.31□□□□□ -1.4
PROM1-220ENST00000540805 KDM3BQ7LBC6 1761 aa6.31□□□□□ -1.4
PROM1-220ENST00000540805 AIMP1Q12904 312 aaKnown RBP6.31□□□□□ -1.4
PROM1-220ENST00000540805 FOXD4L6Q3SYB3 417 aaPredicted RBP6.31□□□□□ -1.4
PROM1-220ENST00000540805 HSP90AB2PQ58FF8 381 aa6.31□□□□□ -1.4
PROM1-220ENST00000540805 FOXD4L3Q6VB84 417 aaPredicted RBP6.31□□□□□ -1.4
PROM1-220ENST00000540805 FBXW7Q969H0 707 aa6.31□□□□□ -1.4
PROM1-220ENST00000540805 USP26Q9BXU7 913 aa6.31□□□□□ -1.4
PROM1-220ENST00000540805 TTC21AQ8NDW8 1320 aa6.3□□□□□ -1.4
PROM1-220ENST00000540805 KIF1AQ12756 1690 aa6.3□□□□□ -1.4
PROM1-220ENST00000540805 ERICH4A6NGS2 130 aa6.3□□□□□ -1.4
PROM1-220ENST00000540805 TTC22Q5TAA0 569 aa6.3□□□□□ -1.4
PROM1-220ENST00000540805 ZGPATQ8N5A5 531 aaKnown RBP6.3□□□□□ -1.4
PROM1-220ENST00000540805 MYRIPQ8NFW9 859 aa6.3□□□□□ -1.4
PROM1-220ENST00000540805 ARHGAP45Q92619 1136 aa6.3□□□□□ -1.4
PROM1-220ENST00000540805 NFE2L2Q16236 605 aa6.3□□□□□ -1.4
PROM1-220ENST00000540805 PLEKHM2Q8IWE5 1019 aa6.3□□□□□ -1.4
PROM1-220ENST00000540805 MRPL50Q8N5N7 158 aaKnown RBP6.3□□□□□ -1.4
PROM1-220ENST00000540805 ABTB2Q8N961 1025 aa6.3□□□□□ -1.4
PROM1-220ENST00000540805 TSPY26PQ9H489 355 aa6.3□□□□□ -1.4
PROM1-220ENST00000540805 SBNO1A3KN83 1393 aa6.3□□□□□ -1.4
PROM1-220ENST00000540805 ARHGEF10O15013 1369 aa6.3□□□□□ -1.4
PROM1-220ENST00000540805 SIRT2Q8IXJ6 389 aa6.3□□□□□ -1.4
PROM1-220ENST00000540805 SYAP1Q96A49 352 aaPredicted RBP6.3□□□□□ -1.4
PROM1-220ENST00000540805 THUMPD2Q9BTF0 503 aaKnown RBP6.3□□□□□ -1.4
PROM1-220ENST00000540805 ABCC4O15439 1325 aa6.29□□□□□ -1.4
PROM1-220ENST00000540805 IGSF1Q8N6C5 1336 aa6.29□□□□□ -1.4
PROM1-220ENST00000540805 FAM83GA6ND36 823 aa6.29□□□□□ -1.4
PROM1-220ENST00000540805 TSPYL6Q8N831 410 aa6.29□□□□□ -1.4
PROM1-220ENST00000540805 TMX1Q9H3N1 280 aa6.29□□□□□ -1.4
PROM1-220ENST00000540805 ZDHHC9Q9Y397 364 aa6.29□□□□□ -1.4
PROM1-220ENST00000540805 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP6.29□□□□□ -1.4
PROM1-220ENST00000540805 PRR29P0C7W0 189 aa6.29□□□□□ -1.4
PROM1-220ENST00000540805 HSPA1LP34931 641 aa6.29□□□□□ -1.4
PROM1-220ENST00000540805 HMGN5P82970 282 aaKnown RBP6.29□□□□□ -1.4
PROM1-220ENST00000540805 PRIMPOLQ96LW4 560 aa6.29□□□□□ -1.4
PROM1-220ENST00000540805 TUBGCP6Q96RT7 1819 aa6.29□□□□□ -1.4
PROM1-220ENST00000540805 EP400NLQ6ZTU2 488 aa6.29□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms