RNA–Protein interactions for RNA: ENST00000540740.5

PTPN6-214, Transcript of protein tyrosine phosphatase, non-receptor type 6, humanhuman

TSL 4

Gene PTPN6, Length 592 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN6-214ENST00000540740 PRKRIP1Q9H875 184 aaPredicted RBP15.14■□□□□ 0.01
PTPN6-214ENST00000540740 CD2APQ9Y5K6 639 aa15.14■□□□□ 0.01
PTPN6-214ENST00000540740 KIF13BQ9NQT8 1826 aa15.13■□□□□ 0.01
PTPN6-214ENST00000540740 HTATSF1O43719 755 aaKnown RBP15.13■□□□□ 0.01
PTPN6-214ENST00000540740 STARD3NLO95772 234 aa15.13■□□□□ 0.01
PTPN6-214ENST00000540740 FKBP8Q14318 412 aa15.13■□□□□ 0.01
PTPN6-214ENST00000540740 NLGN1Q8N2Q7 840 aa15.13■□□□□ 0.01
PTPN6-214ENST00000540740 PNNQ9H307 717 aaKnown RBP15.13■□□□□ 0.01
PTPN6-214ENST00000540740 KDM3BQ7LBC6 1761 aa15.13■□□□□ 0.01
PTPN6-214ENST00000540740 CHD4Q14839 1912 aa15.12■□□□□ 0.01
PTPN6-214ENST00000540740 THUMPD2Q9BTF0 503 aaKnown RBP15.12■□□□□ 0.01
PTPN6-214ENST00000540740 WWC3Q9ULE0 1092 aa15.12■□□□□ 0.01
PTPN6-214ENST00000540740 ZNF330Q9Y3S2 320 aaPredicted RBP15.12■□□□□ 0.01
PTPN6-214ENST00000540740 N4BP2Q86UW6 1770 aaPredicted RBP15.11■□□□□ 0.01
PTPN6-214ENST00000540740 ZPR1O75312 459 aa15.11■□□□□ 0.01
PTPN6-214ENST00000540740 WDR43Q15061 677 aaKnown RBP eCLIP15.11■□□□□ 0.01
PTPN6-214ENST00000540740 USPL1Q5W0Q7 1092 aa15.11■□□□□ 0.01
PTPN6-214ENST00000540740 CCDC146Q8IYE0 955 aa15.11■□□□□ 0.01
PTPN6-214ENST00000540740 MIS18AQ9NYP9 233 aa15.11■□□□□ 0.01
PTPN6-214ENST00000540740 PARP3Q9Y6F1 533 aa15.11■□□□□ 0.01
PTPN6-214ENST00000540740 SCN7AQ01118 1682 aa15.11■□□□□ 0.01
PTPN6-214ENST00000540740 KIAA1551Q9HCM1 1747 aa15.11■□□□□ 0.01
PTPN6-214ENST00000540740 LAMB4A4D0S4 1761 aa15.11■□□□□ 0.01
PTPN6-214ENST00000540740 C10orf71Q711Q0 1435 aa15.1■□□□□ 0.01
PTPN6-214ENST00000540740 PRAMEF22A3QJZ6 481 aa15.1■□□□□ 0.01
PTPN6-214ENST00000540740 YBX3P16989 372 aaKnown RBP eCLIP15.1■□□□□ 0.01
PTPN6-214ENST00000540740 TEX13AQ9BXU3 409 aaPredicted RBP15.1■□□□□ 0.01
PTPN6-214ENST00000540740 A1BGP04217 495 aa15.09■□□□□ 0.01
PTPN6-214ENST00000540740 DDR1Q08345 913 aa15.09■□□□□ 0.01
PTPN6-214ENST00000540740 TAF7Q15545 349 aaPredicted RBP15.09■□□□□ 0.01
PTPN6-214ENST00000540740 PXDNLA1KZ92 1463 aa15.08■□□□□ 0.01
PTPN6-214ENST00000540740 ZNF316A6NFI3 1004 aaPredicted RBP15.08■□□□□ 0
PTPN6-214ENST00000540740 PIP4K2AP48426 406 aaPredicted RBP15.08■□□□□ 0
PTPN6-214ENST00000540740 EIF5P55010 431 aaKnown RBP15.08■□□□□ 0
PTPN6-214ENST00000540740 NARFQ9UHQ1 456 aa15.08■□□□□ 0
PTPN6-214ENST00000540740 RRP7AQ9Y3A4 280 aaKnown RBP15.08■□□□□ 0
PTPN6-214ENST00000540740 AFDNP55196 1824 aaKnown RBP15.08■□□□□ 0
PTPN6-214ENST00000540740 BCORQ6W2J9 1755 aa15.07■□□□□ 0
PTPN6-214ENST00000540740 SNRPA1P09661 255 aaKnown RBP15.07■□□□□ 0
PTPN6-214ENST00000540740 RIPK4P57078 832 aa15.07■□□□□ 0
PTPN6-214ENST00000540740 USP16Q9Y5T5 823 aa15.07■□□□□ 0
PTPN6-214ENST00000540740 TMPOP42166 694 aaKnown RBP15.06■□□□□ 0
PTPN6-214ENST00000540740 NEUROD2Q15784 382 aa15.06■□□□□ 0
PTPN6-214ENST00000540740 BCL2L12Q9HB09 334 aa15.06■□□□□ 0
PTPN6-214ENST00000540740 ADAMTS8Q9UP79 889 aa15.06■□□□□ 0
PTPN6-214ENST00000540740 A0A087WZG4 1122 aa15.05■□□□□ -0
PTPN6-214ENST00000540740 POLRMTO00411 1230 aaKnown RBP15.05■□□□□ -0
PTPN6-214ENST00000540740 IL6STP40189 918 aaPredicted RBP15.05■□□□□ -0
PTPN6-214ENST00000540740 NFIXQ14938 502 aa15.05■□□□□ -0
PTPN6-214ENST00000540740 PNISRQ8TF01 805 aaKnown RBP15.05■□□□□ -0
PTPN6-214ENST00000540740 TBC1D2BQ9UPU7 963 aa15.05■□□□□ -0
PTPN6-214ENST00000540740 BRCA1P38398 1863 aaKnown RBP15.05■□□□□ -0
PTPN6-214ENST00000540740 NRXN2Q9P2S2 1712 aa15.04■□□□□ -0
PTPN6-214ENST00000540740 A0A0G2JLW4 131 aa15.04■□□□□ -0
PTPN6-214ENST00000540740 GRIN3BO60391 1043 aa15.04■□□□□ -0
PTPN6-214ENST00000540740 TM4SF1P30408 202 aa15.04■□□□□ -0
PTPN6-214ENST00000540740 BICDL1Q6ZP65 573 aa15.04■□□□□ -0
PTPN6-214ENST00000540740 NPM2Q86SE8 214 aaKnown RBP15.04■□□□□ -0
PTPN6-214ENST00000540740 RUNDC1Q96C34 613 aa15.04■□□□□ -0
PTPN6-214ENST00000540740 DPEP1P16444 411 aa15.03■□□□□ -0
PTPN6-214ENST00000540740 LMOD3Q0VAK6 560 aa15.03■□□□□ -0
PTPN6-214ENST00000540740 TSPYL4Q9UJ04 414 aa15.03■□□□□ -0
PTPN6-214ENST00000540740 EIF4A1P60842 406 aaKnown RBP15.02■□□□□ -0
PTPN6-214ENST00000540740 TGFB2P61812 414 aa15.02■□□□□ -0
PTPN6-214ENST00000540740 NBPF26B4DH59 902 aa15.01□□□□□ -0.01
PTPN6-214ENST00000540740 TBC1D9BQ66K14 1250 aa15.01□□□□□ -0.01
PTPN6-214ENST00000540740 NBPF10Q6P3W6 841 aaKnown RBP15.01□□□□□ -0.01
PTPN6-214ENST00000540740 DZIP3Q86Y13 1208 aaKnown RBP15.01□□□□□ -0.01
PTPN6-214ENST00000540740 NBPF15Q8N660 670 aa15.01□□□□□ -0.01
PTPN6-214ENST00000540740 CARMIL3Q8ND23 1372 aa15□□□□□ -0.01
PTPN6-214ENST00000540740 GIGYF1O75420 1035 aaPredicted RBP15□□□□□ -0.01
PTPN6-214ENST00000540740 CAMTA2O94983 1202 aa15□□□□□ -0.01
PTPN6-214ENST00000540740 SERPINB2P05120 415 aa15□□□□□ -0.01
PTPN6-214ENST00000540740 CCDC184Q52MB2 194 aa15□□□□□ -0.01
PTPN6-214ENST00000540740 BCS1LQ9Y276 419 aa15□□□□□ -0.01
PTPN6-214ENST00000540740 DLEC1Q9Y238 1755 aa14.99□□□□□ -0.01
PTPN6-214ENST00000540740 CHRNA5P30532 468 aa14.99□□□□□ -0.01
PTPN6-214ENST00000540740 TRIM35Q9UPQ4 493 aa14.99□□□□□ -0.01
PTPN6-214ENST00000540740 LAS1LQ9Y4W2 734 aaKnown RBP14.99□□□□□ -0.01
PTPN6-214ENST00000540740 ANKRD31Q8N7Z5 1873 aa14.99□□□□□ -0.01
PTPN6-214ENST00000540740 ANP32CO43423 234 aa14.98□□□□□ -0.01
PTPN6-214ENST00000540740 NGEFQ8N5V2 710 aa14.98□□□□□ -0.01
PTPN6-214ENST00000540740 ZNF784Q8NCA9 323 aaPredicted RBP14.98□□□□□ -0.01
PTPN6-214ENST00000540740 ARFGEF1Q9Y6D6 1849 aa14.98□□□□□ -0.01
PTPN6-214ENST00000540740 APAF1O14727 1248 aa14.97□□□□□ -0.01
PTPN6-214ENST00000540740 KCNA3P22001 575 aa14.97□□□□□ -0.01
PTPN6-214ENST00000540740 COL11A2P13942 1736 aaPredicted RBP14.97□□□□□ -0.01
PTPN6-214ENST00000540740 MYL6BP14649 208 aa14.96□□□□□ -0.01
PTPN6-214ENST00000540740 CCDC24Q8N4L8 307 aa14.96□□□□□ -0.01
PTPN6-214ENST00000540740 SETDB2Q96T68 719 aa14.96□□□□□ -0.01
PTPN6-214ENST00000540740 PIM2Q9P1W9 311 aa14.96□□□□□ -0.01
PTPN6-214ENST00000540740 ZNF652Q9Y2D9 606 aa14.96□□□□□ -0.01
PTPN6-214ENST00000540740 NPHP1O15259 732 aa14.95□□□□□ -0.02
PTPN6-214ENST00000540740 BABAM1Q9NWV8 329 aa14.95□□□□□ -0.02
PTPN6-214ENST00000540740 SENP3-EIF4A1A0A087X0R7 540 aa14.94□□□□□ -0.02
PTPN6-214ENST00000540740 EIF2S2P20042 333 aaKnown RBP14.94□□□□□ -0.02
PTPN6-214ENST00000540740 KRT24Q2M2I5 525 aa14.94□□□□□ -0.02
PTPN6-214ENST00000540740 DALRD3Q5D0E6 543 aaKnown RBP14.94□□□□□ -0.02
PTPN6-214ENST00000540740 PRR5LQ6MZQ0 368 aa14.94□□□□□ -0.02
PTPN6-214ENST00000540740 CNBD1Q8NA66 436 aa14.94□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms