RNA–Protein interactions for RNA: ENST00000540728.6

CACNA2D4-211, Transcript of calcium voltage-gated channel auxiliary subunit alpha2delta 4, humanhuman

TSL 2

Gene CACNA2D4, Length 596 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA2D4-211ENST00000540728 MYBBP1AQ9BQG0 1328 aaKnown RBP22.74■■□□□ 1.23
CACNA2D4-211ENST00000540728 USP42Q9H9J4 1324 aaKnown RBP22.74■■□□□ 1.23
CACNA2D4-211ENST00000540728 PXDNLA1KZ92 1463 aa22.73■■□□□ 1.23
CACNA2D4-211ENST00000540728 ZPR1O75312 459 aa22.73■■□□□ 1.23
CACNA2D4-211ENST00000540728 PARP3Q9Y6F1 533 aa22.73■■□□□ 1.23
CACNA2D4-211ENST00000540728 MAPK8IP3Q9UPT6 1336 aa22.73■■□□□ 1.23
CACNA2D4-211ENST00000540728 HEG1Q9ULI3 1381 aa22.73■■□□□ 1.23
CACNA2D4-211ENST00000540728 N4BP2Q86UW6 1770 aaPredicted RBP22.72■■□□□ 1.23
CACNA2D4-211ENST00000540728 SOS1Q07889 1333 aaPredicted RBP22.72■■□□□ 1.23
CACNA2D4-211ENST00000540728 KIAA1551Q9HCM1 1747 aa22.71■■□□□ 1.23
CACNA2D4-211ENST00000540728 ZBTB1Q9Y2K1 713 aa22.71■■□□□ 1.23
CACNA2D4-211ENST00000540728 COL15A1P39059 1388 aa22.71■■□□□ 1.23
CACNA2D4-211ENST00000540728 CANXP27824 592 aaKnown RBP22.7■■□□□ 1.22
CACNA2D4-211ENST00000540728 DCTN1Q14203 1278 aa22.7■■□□□ 1.22
CACNA2D4-211ENST00000540728 PLEKHF1Q96S99 279 aa22.7■■□□□ 1.22
CACNA2D4-211ENST00000540728 FKBP8Q14318 412 aa22.69■■□□□ 1.22
CACNA2D4-211ENST00000540728 NFE2L2Q16236 605 aa22.69■■□□□ 1.22
CACNA2D4-211ENST00000540728 TAF7Q15545 349 aaPredicted RBP22.68■■□□□ 1.22
CACNA2D4-211ENST00000540728 NPM2Q86SE8 214 aaKnown RBP22.68■■□□□ 1.22
CACNA2D4-211ENST00000540728 A0A087WZG4 1122 aa22.67■■□□□ 1.22
CACNA2D4-211ENST00000540728 KCNQ3O43525 872 aa22.67■■□□□ 1.22
CACNA2D4-211ENST00000540728 USPL1Q5W0Q7 1092 aa22.67■■□□□ 1.22
CACNA2D4-211ENST00000540728 NARFQ9UHQ1 456 aa22.67■■□□□ 1.22
CACNA2D4-211ENST00000540728 DLG5Q8TDM6 1919 aa22.65■■□□□ 1.22
CACNA2D4-211ENST00000540728 DDR1Q08345 913 aa22.65■■□□□ 1.22
CACNA2D4-211ENST00000540728 A0A0G2JLW4 131 aa22.64■■□□□ 1.21
CACNA2D4-211ENST00000540728 TGFB2P61812 414 aa22.64■■□□□ 1.21
CACNA2D4-211ENST00000540728 PNISRQ8TF01 805 aaKnown RBP22.64■■□□□ 1.21
CACNA2D4-211ENST00000540728 ZNF330Q9Y3S2 320 aaPredicted RBP22.64■■□□□ 1.21
CACNA2D4-211ENST00000540728 ATP10DQ9P241 1426 aa22.64■■□□□ 1.21
CACNA2D4-211ENST00000540728 SCN7AQ01118 1682 aa22.63■■□□□ 1.21
CACNA2D4-211ENST00000540728 SNRPA1P09661 255 aaKnown RBP22.63■■□□□ 1.21
CACNA2D4-211ENST00000540728 EIF5P55010 431 aaKnown RBP22.63■■□□□ 1.21
CACNA2D4-211ENST00000540728 WDR43Q15061 677 aaKnown RBP eCLIP22.63■■□□□ 1.21
CACNA2D4-211ENST00000540728 PRKRIP1Q9H875 184 aaPredicted RBP22.63■■□□□ 1.21
CACNA2D4-211ENST00000540728 BCS1LQ9Y276 419 aa22.63■■□□□ 1.21
CACNA2D4-211ENST00000540728 DPEP1P16444 411 aa22.62■■□□□ 1.21
CACNA2D4-211ENST00000540728 IL6STP40189 918 aaPredicted RBP22.62■■□□□ 1.21
CACNA2D4-211ENST00000540728 BRCA1P38398 1863 aaKnown RBP22.61■■□□□ 1.21
CACNA2D4-211ENST00000540728 POLRMTO00411 1230 aaKnown RBP22.6■■□□□ 1.21
CACNA2D4-211ENST00000540728 GIGYF1O75420 1035 aaPredicted RBP22.6■■□□□ 1.21
CACNA2D4-211ENST00000540728 A1BGP04217 495 aa22.6■■□□□ 1.21
CACNA2D4-211ENST00000540728 TM4SF1P30408 202 aa22.6■■□□□ 1.21
CACNA2D4-211ENST00000540728 MIS18AQ9NYP9 233 aa22.6■■□□□ 1.21
CACNA2D4-211ENST00000540728 USP16Q9Y5T5 823 aa22.6■■□□□ 1.21
CACNA2D4-211ENST00000540728 RIPK4P57078 832 aa22.59■■□□□ 1.21
CACNA2D4-211ENST00000540728 LMOD3Q0VAK6 560 aa22.59■■□□□ 1.21
CACNA2D4-211ENST00000540728 AFDNP55196 1824 aaKnown RBP22.58■■□□□ 1.21
CACNA2D4-211ENST00000540728 ADCY9O60503 1353 aa22.58■■□□□ 1.21
CACNA2D4-211ENST00000540728 NFIXQ14938 502 aa22.57■■□□□ 1.2
CACNA2D4-211ENST00000540728 ZNF526Q8TF50 670 aaPredicted RBP22.57■■□□□ 1.2
CACNA2D4-211ENST00000540728 THUMPD2Q9BTF0 503 aaKnown RBP22.57■■□□□ 1.2
CACNA2D4-211ENST00000540728 TBC1D2BQ9UPU7 963 aa22.57■■□□□ 1.2
CACNA2D4-211ENST00000540728 TMPOP42166 694 aaKnown RBP22.56■■□□□ 1.2
CACNA2D4-211ENST00000540728 BICDL1Q6ZP65 573 aa22.56■■□□□ 1.2
CACNA2D4-211ENST00000540728 BCL2L12Q9HB09 334 aa22.56■■□□□ 1.2
CACNA2D4-211ENST00000540728 NRXN2Q9P2S2 1712 aa22.55■■□□□ 1.2
CACNA2D4-211ENST00000540728 PRAMEF22A3QJZ6 481 aa22.55■■□□□ 1.2
CACNA2D4-211ENST00000540728 CHRNA5P30532 468 aa22.55■■□□□ 1.2
CACNA2D4-211ENST00000540728 CCDC146Q8IYE0 955 aa22.55■■□□□ 1.2
CACNA2D4-211ENST00000540728 RUNDC1Q96C34 613 aa22.55■■□□□ 1.2
CACNA2D4-211ENST00000540728 ARFGEF1Q9Y6D6 1849 aa22.54■■□□□ 1.2
CACNA2D4-211ENST00000540728 ZNF316A6NFI3 1004 aaPredicted RBP22.54■■□□□ 1.2
CACNA2D4-211ENST00000540728 PIM2Q9P1W9 311 aa22.54■■□□□ 1.2
CACNA2D4-211ENST00000540728 BCORQ6W2J9 1755 aa22.53■■□□□ 1.2
CACNA2D4-211ENST00000540728 SERPINB2P05120 415 aa22.53■■□□□ 1.2
CACNA2D4-211ENST00000540728 ARHGAP27Q6ZUM4 889 aa22.53■■□□□ 1.2
CACNA2D4-211ENST00000540728 DZIP3Q86Y13 1208 aaKnown RBP22.53■■□□□ 1.2
CACNA2D4-211ENST00000540728 GPBP1L1Q9HC44 474 aaPredicted RBP22.53■■□□□ 1.2
CACNA2D4-211ENST00000540728 ADAMTS8Q9UP79 889 aa22.53■■□□□ 1.2
CACNA2D4-211ENST00000540728 LAMB4A4D0S4 1761 aa22.53■■□□□ 1.2
CACNA2D4-211ENST00000540728 PIP4K2AP48426 406 aaPredicted RBP22.52■■□□□ 1.2
CACNA2D4-211ENST00000540728 C1QTNF8P60827 252 aa22.52■■□□□ 1.2
CACNA2D4-211ENST00000540728 NEUROD2Q15784 382 aa22.52■■□□□ 1.2
CACNA2D4-211ENST00000540728 DALRD3Q5D0E6 543 aaKnown RBP22.52■■□□□ 1.2
CACNA2D4-211ENST00000540728 TSPYL4Q9UJ04 414 aa22.52■■□□□ 1.2
CACNA2D4-211ENST00000540728 KDM3BQ7LBC6 1761 aa22.52■■□□□ 1.2
CACNA2D4-211ENST00000540728 KCNA3P22001 575 aa22.51■■□□□ 1.19
CACNA2D4-211ENST00000540728 EIF4A1P60842 406 aaKnown RBP22.51■■□□□ 1.19
CACNA2D4-211ENST00000540728 RRP7AQ9Y3A4 280 aaKnown RBP22.51■■□□□ 1.19
CACNA2D4-211ENST00000540728 CARMIL3Q8ND23 1372 aa22.5■■□□□ 1.19
CACNA2D4-211ENST00000540728 DLEC1Q9Y238 1755 aa22.5■■□□□ 1.19
CACNA2D4-211ENST00000540728 CAMTA2O94983 1202 aa22.5■■□□□ 1.19
CACNA2D4-211ENST00000540728 TBC1D9BQ66K14 1250 aa22.5■■□□□ 1.19
CACNA2D4-211ENST00000540728 BABAM1Q9NWV8 329 aa22.5■■□□□ 1.19
CACNA2D4-211ENST00000540728 SETDB2Q96T68 719 aa22.49■■□□□ 1.19
CACNA2D4-211ENST00000540728 ZNF652Q9Y2D9 606 aa22.49■■□□□ 1.19
CACNA2D4-211ENST00000540728 SENP3-EIF4A1A0A087X0R7 540 aa22.48■■□□□ 1.19
CACNA2D4-211ENST00000540728 NPHP1O15259 732 aa22.48■■□□□ 1.19
CACNA2D4-211ENST00000540728 NBPF26B4DH59 902 aa22.47■■□□□ 1.19
CACNA2D4-211ENST00000540728 NBPF10Q6P3W6 841 aaKnown RBP22.47■■□□□ 1.19
CACNA2D4-211ENST00000540728 CLEC4GQ6UXB4 293 aa22.47■■□□□ 1.19
CACNA2D4-211ENST00000540728 NBPF15Q8N660 670 aa22.47■■□□□ 1.19
CACNA2D4-211ENST00000540728 C2CD5Q86YS7 1000 aa22.45■■□□□ 1.18
CACNA2D4-211ENST00000540728 ANKRD31Q8N7Z5 1873 aa22.45■■□□□ 1.18
CACNA2D4-211ENST00000540728 RGL2O15211 777 aa22.44■■□□□ 1.18
CACNA2D4-211ENST00000540728 COL11A2P13942 1736 aaPredicted RBP22.44■■□□□ 1.18
CACNA2D4-211ENST00000540728 H0YIN7 160 aa22.43■■□□□ 1.18
CACNA2D4-211ENST00000540728 CNBD1Q8NA66 436 aa22.43■■□□□ 1.18
CACNA2D4-211ENST00000540728 PDZRN3Q9UPQ7 1066 aa22.43■■□□□ 1.18
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms