RNA–Protein interactions for RNA: ENST00000540709.1

MDM2-227, Transcript of MDM2 proto-oncogene, humanhuman

TSL 3

Gene MDM2, Length 502 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MDM2-227ENST00000540709 IQSEC3Q9UPP2 1182 aaPredicted RBP7.71□□□□□ -1.18
MDM2-227ENST00000540709 PHF24Q9UPV7 400 aa7.71□□□□□ -1.18
MDM2-227ENST00000540709 LGR5O75473 907 aa7.7□□□□□ -1.18
MDM2-227ENST00000540709 THBS1P07996 1170 aa7.7□□□□□ -1.18
MDM2-227ENST00000540709 RFX1P22670 979 aa7.7□□□□□ -1.18
MDM2-227ENST00000540709 MAP3K10Q02779 954 aa7.7□□□□□ -1.18
MDM2-227ENST00000540709 CDCA8Q53HL2 280 aa7.7□□□□□ -1.18
MDM2-227ENST00000540709 LARGE2Q8N3Y3 721 aa7.7□□□□□ -1.18
MDM2-227ENST00000540709 TSEN2Q8NCE0 465 aaKnown RBP7.7□□□□□ -1.18
MDM2-227ENST00000540709 L3MBTL2Q969R5 705 aa7.7□□□□□ -1.18
MDM2-227ENST00000540709 ABHD17AQ96GS6 310 aa7.7□□□□□ -1.18
MDM2-227ENST00000540709 ADAMTS8Q9UP79 889 aa7.7□□□□□ -1.18
MDM2-227ENST00000540709 A0A1W2PNR3 127 aa7.69□□□□□ -1.18
MDM2-227ENST00000540709 SLURP2P0DP57 97 aa7.69□□□□□ -1.18
MDM2-227ENST00000540709 HINFPQ9BQA5 517 aa7.69□□□□□ -1.18
MDM2-227ENST00000540709 ZCCHC2Q9C0B9 1178 aaKnown RBP7.69□□□□□ -1.18
MDM2-227ENST00000540709 TSPAN10Q9H1Z9 355 aaPredicted RBP7.69□□□□□ -1.18
MDM2-227ENST00000540709 NEUROD4Q9HD90 331 aa7.69□□□□□ -1.18
MDM2-227ENST00000540709 ATP4AP20648 1035 aa7.68□□□□□ -1.18
MDM2-227ENST00000540709 NOS2P35228 1153 aa7.68□□□□□ -1.18
MDM2-227ENST00000540709 TXLNAP40222 546 aa7.68□□□□□ -1.18
MDM2-227ENST00000540709 MARSP56192 900 aaKnown RBP7.68□□□□□ -1.18
MDM2-227ENST00000540709 ZDHHC1Q8WTX9 485 aa7.68□□□□□ -1.18
MDM2-227ENST00000540709 CHMP7Q8WUX9 453 aaPredicted RBP7.68□□□□□ -1.18
MDM2-227ENST00000540709 CFHR5Q9BXR6 569 aa7.68□□□□□ -1.18
MDM2-227ENST00000540709 CRISPLD1Q9H336 500 aa7.68□□□□□ -1.18
MDM2-227ENST00000540709 VRTNQ9H8Y1 702 aa7.68□□□□□ -1.18
MDM2-227ENST00000540709 CHMP3Q9Y3E7 222 aa7.68□□□□□ -1.18
MDM2-227ENST00000540709 GTF3C3Q9Y5Q9 886 aa7.68□□□□□ -1.18
MDM2-227ENST00000540709 LOC100996750A0A140TA64 210 aa7.67□□□□□ -1.18
MDM2-227ENST00000540709 SERTM1A2A2V5 107 aa7.67□□□□□ -1.18
MDM2-227ENST00000540709 BNIP3LO60238 219 aa7.67□□□□□ -1.18
MDM2-227ENST00000540709 CELA2BP08218 269 aaPredicted RBP7.67□□□□□ -1.18
MDM2-227ENST00000540709 BMP4P12644 408 aa7.67□□□□□ -1.18
MDM2-227ENST00000540709 LBRQ14739 615 aaKnown RBP7.67□□□□□ -1.18
MDM2-227ENST00000540709 FIGNL1Q6PIW4 674 aa7.67□□□□□ -1.18
MDM2-227ENST00000540709 C1orf216Q8TAB5 229 aa7.67□□□□□ -1.18
MDM2-227ENST00000540709 KRTAP4-6Q9BYQ5 205 aa7.67□□□□□ -1.18
MDM2-227ENST00000540709 HCN4Q9Y3Q4 1203 aa7.67□□□□□ -1.18
MDM2-227ENST00000540709 DCDC2BA2VCK2 349 aa7.66□□□□□ -1.18
MDM2-227ENST00000540709 KHNYNO15037 678 aaKnown RBP7.66□□□□□ -1.18
MDM2-227ENST00000540709 ATXN7O15265 892 aaPredicted RBP7.66□□□□□ -1.18
MDM2-227ENST00000540709 PPP1R12BO60237 982 aaPredicted RBP7.66□□□□□ -1.18
MDM2-227ENST00000540709 EPHA4P54764 986 aa7.66□□□□□ -1.18
MDM2-227ENST00000540709 SEC13P55735 322 aa7.66□□□□□ -1.18
MDM2-227ENST00000540709 CTBSQ01459 385 aa7.66□□□□□ -1.18
MDM2-227ENST00000540709 CRTC2Q53ET0 693 aaPredicted RBP7.66□□□□□ -1.18
MDM2-227ENST00000540709 SH3PXD2AQ5TCZ1 1133 aa7.66□□□□□ -1.18
MDM2-227ENST00000540709 ZNF295-AS1Q8N0V1 137 aa7.66□□□□□ -1.18
MDM2-227ENST00000540709 NEDD1Q8NHV4 660 aa7.66□□□□□ -1.18
MDM2-227ENST00000540709 ZIC5Q96T25 663 aa7.66□□□□□ -1.18
MDM2-227ENST00000540709 ZDHHC3Q9NYG2 299 aa7.66□□□□□ -1.18
MDM2-227ENST00000540709 ATXN7L1Q9ULK2 861 aaPredicted RBP7.66□□□□□ -1.18
MDM2-227ENST00000540709 PCDHGC4Q9Y5F7 938 aa7.66□□□□□ -1.18
MDM2-227ENST00000540709 FGFR3P22607 806 aa7.65□□□□□ -1.18
MDM2-227ENST00000540709 FOXK2Q01167 660 aa7.65□□□□□ -1.18
MDM2-227ENST00000540709 DPYDQ12882 1025 aa7.65□□□□□ -1.18
MDM2-227ENST00000540709 UBAP2LQ14157 1087 aaKnown RBP7.65□□□□□ -1.18
MDM2-227ENST00000540709 TEAD4Q15561 434 aa7.65□□□□□ -1.18
MDM2-227ENST00000540709 LRRC69Q6ZNQ3 347 aa7.65□□□□□ -1.18
MDM2-227ENST00000540709 SIX5Q8N196 739 aa7.65□□□□□ -1.18
MDM2-227ENST00000540709 SCG3Q8WXD2 468 aaKnown RBP7.65□□□□□ -1.18
MDM2-227ENST00000540709 ACDQ96AP0 544 aa7.65□□□□□ -1.18
MDM2-227ENST00000540709 ZMYND15Q9H091 742 aa7.65□□□□□ -1.18
MDM2-227ENST00000540709 ENAMQ9NRM1 1142 aa7.65□□□□□ -1.18
MDM2-227ENST00000540709 BCRP11274 1271 aa7.64□□□□□ -1.19
MDM2-227ENST00000540709 MAP2K3P46734 347 aa7.64□□□□□ -1.19
MDM2-227ENST00000540709 PSMA6P60900 246 aaKnown RBP7.64□□□□□ -1.19
MDM2-227ENST00000540709 KANK4Q5T7N3 995 aaPredicted RBP7.64□□□□□ -1.19
MDM2-227ENST00000540709 NLRP8Q86W28 1048 aa7.64□□□□□ -1.19
MDM2-227ENST00000540709 GAS2L2Q8NHY3 880 aa7.64□□□□□ -1.19
MDM2-227ENST00000540709 KLRG1Q96E93 195 aa7.64□□□□□ -1.19
MDM2-227ENST00000540709 NGLY1Q96IV0 654 aa7.64□□□□□ -1.19
MDM2-227ENST00000540709 OXCT2Q9BYC2 517 aaPredicted RBP7.64□□□□□ -1.19
MDM2-227ENST00000540709 USP17L15C9J2P7 530 aa7.63□□□□□ -1.19
MDM2-227ENST00000540709 USP17L10C9JJH3 530 aa7.63□□□□□ -1.19
MDM2-227ENST00000540709 USP17L13C9JLJ4 530 aa7.63□□□□□ -1.19
MDM2-227ENST00000540709 USP17L12C9JPN9 530 aa7.63□□□□□ -1.19
MDM2-227ENST00000540709 USP17L11C9JVI0 530 aa7.63□□□□□ -1.19
MDM2-227ENST00000540709 USP17L21D6R901 530 aa7.63□□□□□ -1.19
MDM2-227ENST00000540709 USP17L18D6R9N7 530 aa7.63□□□□□ -1.19
MDM2-227ENST00000540709 USP17L22D6RA61 530 aa7.63□□□□□ -1.19
MDM2-227ENST00000540709 USP17L17D6RBQ6 530 aa7.63□□□□□ -1.19
MDM2-227ENST00000540709 USP17L19D6RCP7 530 aa7.63□□□□□ -1.19
MDM2-227ENST00000540709 USP17L20D6RJB6 530 aa7.63□□□□□ -1.19
MDM2-227ENST00000540709 ARHGEF15O94989 841 aa7.63□□□□□ -1.19
MDM2-227ENST00000540709 CD33P20138 364 aa7.63□□□□□ -1.19
MDM2-227ENST00000540709 USP17L24Q0WX57 530 aa7.63□□□□□ -1.19
MDM2-227ENST00000540709 PTK7Q13308 1070 aa7.63□□□□□ -1.19
MDM2-227ENST00000540709 RHPN1Q8TCX5 695 aa7.63□□□□□ -1.19
MDM2-227ENST00000540709 ATAD2Q6PL18 1390 aa7.62□□□□□ -1.19
MDM2-227ENST00000540709 C2CD2LO14523 706 aa7.62□□□□□ -1.19
MDM2-227ENST00000540709 MAPTP10636 758 aaKnown RBP7.62□□□□□ -1.19
MDM2-227ENST00000540709 ANKMY2Q8IV38 441 aa7.62□□□□□ -1.19
MDM2-227ENST00000540709 M0R2N6 131 aa7.61□□□□□ -1.19
MDM2-227ENST00000540709 EML1O00423 815 aa7.61□□□□□ -1.19
MDM2-227ENST00000540709 DKK1O94907 266 aa7.61□□□□□ -1.19
MDM2-227ENST00000540709 IRS1P35568 1242 aa7.61□□□□□ -1.19
MDM2-227ENST00000540709 CFAP70Q5T0N1 1121 aa7.61□□□□□ -1.19
MDM2-227ENST00000540709 GALNT6Q8NCL4 622 aa7.61□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 47.4 ms